assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000015745.1_ASM1574v1	NC_009328	Geobacillus thermodenitrificans NG80-2, complete sequence	1	316026-316120	1	CRISPRCasFinder	no	cas6	cas3,cas6,csa3,DEDDh,WYL,DinG,cas2	Unclear	GTTTGTATCGTACCTATGAGGGATTGAAAC	30	0	0	NA	NA	NA	1	1	Unclear	cas3,cas6,csa3,DEDDh,WYL,DinG,cas2	NA|60aa|up_0|NC_009328.1_315431_315611_+,NA|174aa|down_4|NC_009328.1_320824_321346_-	NA|233aa|up_9|NC_009328.1_306522_307221_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|473aa|up_8|NC_009328.1_307207_308626_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|145aa|up_7|NC_009328.1_308719_309154_-	pfam18218, Spa1_C, Lantibiotic immunity protein Spa1 C-terminal domain	NA|263aa|up_6|NC_009328.1_309208_309997_-	TIGR03733, lanti_perm_MutG, lantibiotic protection ABC transporter permease subunit, MutG family	NA|249aa|up_5|NC_009328.1_309998_310745_-	TIGR03732, lanti_perm_MutE, lantibiotic protection ABC transporter permease subunit, MutE/EpiE family	NA|230aa|up_4|NC_009328.1_310763_311453_-	TIGR03740, galliderm_ABC, gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit	NA|210aa|up_3|NC_009328.1_312107_312737_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|378aa|up_2|NC_009328.1_313126_314260_-	cd03295, ABC_OpuCA_Osmoprotection, ATP-binding cassette domain of the osmoprotectant transporter	NA|301aa|up_1|NC_009328.1_314276_315179_-	cd13528, PBP2_osmoprotectants, Substrate-binding domain of osmoregulatory ABC-type transporters; the type 2 periplasmic-binding protein fold	NA|60aa|up_0|NC_009328.1_315431_315611_+	NA	cas6|249aa|down_0|NC_009328.1_316171_316918_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|148aa|down_1|NC_009328.1_318004_318448_+	cd06553, ASCH_Ef3133_like, ASC-1 homology domain, subfamily similar to Enterococcus faecalis Ef3133	NA|413aa|down_2|NC_009328.1_318800_320039_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|218aa|down_3|NC_009328.1_320211_320865_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|174aa|down_4|NC_009328.1_320824_321346_-	NA	NA|458aa|down_5|NC_009328.1_321515_322889_-	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK	NA|221aa|down_6|NC_009328.1_322878_323541_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|403aa|down_7|NC_009328.1_323904_325113_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|96aa|down_8|NC_009328.1_325871_326159_+	pfam06196, DUF997, Protein of unknown function (DUF997)	NA|490aa|down_9|NC_009328.1_326155_327625_+	PRK09442, panF, sodium/pantothenate symporter
GCF_000015745.1_ASM1574v1	NC_009328	Geobacillus thermodenitrificans NG80-2, complete sequence	2	317100-317856	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas6	cas3,cas6,csa3,DEDDh,WYL,DinG,cas2	Unclear	GTTTGTATCGTACCTATGAGGGATTGAAAC,GTTTGTATCGTACCTATGAGGGATTGAAAC,GTTTGTATCGTACCTATGAGGGATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	11,11,11	11	Unclear	cas3,cas6,csa3,DEDDh,WYL,DinG,cas2	NA|60aa|up_1|NC_009328.1_315431_315611_+,NA|174aa|down_3|NC_009328.1_320824_321346_-	NA|473aa|up_9|NC_009328.1_307207_308626_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|145aa|up_8|NC_009328.1_308719_309154_-	pfam18218, Spa1_C, Lantibiotic immunity protein Spa1 C-terminal domain	NA|263aa|up_7|NC_009328.1_309208_309997_-	TIGR03733, lanti_perm_MutG, lantibiotic protection ABC transporter permease subunit, MutG family	NA|249aa|up_6|NC_009328.1_309998_310745_-	TIGR03732, lanti_perm_MutE, lantibiotic protection ABC transporter permease subunit, MutE/EpiE family	NA|230aa|up_5|NC_009328.1_310763_311453_-	TIGR03740, galliderm_ABC, gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit	NA|210aa|up_4|NC_009328.1_312107_312737_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|378aa|up_3|NC_009328.1_313126_314260_-	cd03295, ABC_OpuCA_Osmoprotection, ATP-binding cassette domain of the osmoprotectant transporter	NA|301aa|up_2|NC_009328.1_314276_315179_-	cd13528, PBP2_osmoprotectants, Substrate-binding domain of osmoregulatory ABC-type transporters; the type 2 periplasmic-binding protein fold	NA|60aa|up_1|NC_009328.1_315431_315611_+	NA	cas6|249aa|up_0|NC_009328.1_316171_316918_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|148aa|down_0|NC_009328.1_318004_318448_+	cd06553, ASCH_Ef3133_like, ASC-1 homology domain, subfamily similar to Enterococcus faecalis Ef3133	NA|413aa|down_1|NC_009328.1_318800_320039_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|218aa|down_2|NC_009328.1_320211_320865_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|174aa|down_3|NC_009328.1_320824_321346_-	NA	NA|458aa|down_4|NC_009328.1_321515_322889_-	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK	NA|221aa|down_5|NC_009328.1_322878_323541_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|403aa|down_6|NC_009328.1_323904_325113_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|96aa|down_7|NC_009328.1_325871_326159_+	pfam06196, DUF997, Protein of unknown function (DUF997)	NA|490aa|down_8|NC_009328.1_326155_327625_+	PRK09442, panF, sodium/pantothenate symporter	NA|410aa|down_9|NC_009328.1_327628_328858_+	cd08659, M20_ArgE_DapE-like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like
GCF_000015745.1_ASM1574v1	NC_009328	Geobacillus thermodenitrificans NG80-2, complete sequence	3	346707-347136	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3,cas6,csa3,DEDDh,WYL,DinG,cas2	Orphan	GTTTGTATCGTACCTATGAGGGATTGAAAC,GTTTGTATCGTACCTATGAGGGATTGAAAC,GTTTGTATCGTACCTATGAGGGATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	5,6,6	6	Orphan	cas3,cas6,csa3,DEDDh,WYL,DinG,cas2	NA|179aa|up_8|NC_009328.1_335374_335911_+,NA|60aa|down_7|NC_009328.1_357624_357804_+	NA|573aa|up_9|NC_009328.1_332838_334557_-	cd07329, M56_like, Peptidase M56-like, integral membrane metallopeptidase in bacteria	NA|179aa|up_8|NC_009328.1_335374_335911_+	NA	NA|507aa|up_7|NC_009328.1_335932_337453_+	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]	NA|307aa|up_6|NC_009328.1_337597_338518_+	PRK13337, PRK13337, putative lipid kinase; Reviewed	NA|461aa|up_5|NC_009328.1_338592_339975_+	TIGR00479, 23S_rRNA_uracil1939-C5-methyltransferase_RlmD, 23S rRNA (uracil-5-)-methyltransferase RumA	NA|462aa|up_4|NC_009328.1_340643_342029_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|258aa|up_3|NC_009328.1_342367_343141_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|624aa|up_2|NC_009328.1_343115_344987_+	pfam02687, FtsX, FtsX-like permease family	NA|119aa|up_1|NC_009328.1_345011_345368_+	COG5294, COG5294, Uncharacterized protein conserved in bacteria [Function unknown]	NA|117aa|up_0|NC_009328.1_345768_346119_+	pfam09966, DUF2200, Uncharacterized protein conserved in bacteria (DUF2200)	NA|108aa|down_0|NC_009328.1_348393_348717_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|187aa|down_1|NC_009328.1_348709_349270_+	pfam08006, DUF1700, Protein of unknown function (DUF1700)	NA|268aa|down_2|NC_009328.1_349262_350066_+	pfam13349, DUF4097, Putative adhesin	NA|278aa|down_3|NC_009328.1_350441_351275_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|197aa|down_4|NC_009328.1_351394_351985_+	pfam04229, GrpB, GrpB protein	NA|397aa|down_5|NC_009328.1_353720_354911_+	pfam01610, DDE_Tnp_ISL3, Transposase	NA|490aa|down_6|NC_009328.1_355960_357430_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|60aa|down_7|NC_009328.1_357624_357804_+	NA	NA|411aa|down_8|NC_009328.1_358299_359532_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|464aa|down_9|NC_009328.1_359806_361198_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]
GCF_000015745.1_ASM1574v1	NC_009328	Geobacillus thermodenitrificans NG80-2, complete sequence	4	2094403-2094589	4	CRISPRCasFinder	no	cas2	cas3,cas6,csa3,DEDDh,WYL,DinG,cas2	Unclear	GTGTTTCAATCCTCTAAACGAGGCCTATCTCTTTCAAC	38	0	0	NA	NA	NA	2	2	Unclear	cas3,cas6,csa3,DEDDh,WYL,DinG,cas2	NA|147aa|up_6|NC_009328.1_2088892_2089333_-,NA|157aa|up_5|NC_009328.1_2089613_2090084_+,NA|145aa|up_4|NC_009328.1_2090559_2090994_-,NA|136aa|up_3|NC_009328.1_2091756_2092164_+,NA|135aa|up_2|NC_009328.1_2092184_2092589_+,NA|89aa|up_1|NC_009328.1_2092827_2093094_+,NA	NA|240aa|up_9|NC_009328.1_2085749_2086469_+	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown]	NA|248aa|up_8|NC_009328.1_2086469_2087213_+	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown]	NA|169aa|up_7|NC_009328.1_2088299_2088806_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|147aa|up_6|NC_009328.1_2088892_2089333_-	NA	NA|157aa|up_5|NC_009328.1_2089613_2090084_+	NA	NA|145aa|up_4|NC_009328.1_2090559_2090994_-	NA	NA|136aa|up_3|NC_009328.1_2091756_2092164_+	NA	NA|135aa|up_2|NC_009328.1_2092184_2092589_+	NA	NA|89aa|up_1|NC_009328.1_2092827_2093094_+	NA	NA|186aa|up_0|NC_009328.1_2093227_2093785_+	TIGR02227, Inactive_signal_peptidase_IA	NA|283aa|down_0|NC_009328.1_2094830_2095679_-	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|373aa|down_1|NC_009328.1_2096505_2097624_+	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria	NA|261aa|down_2|NC_009328.1_2098246_2099029_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|379aa|down_3|NC_009328.1_2099112_2100249_-	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|190aa|down_4|NC_009328.1_2100298_2100868_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|99aa|down_5|NC_009328.1_2100891_2101188_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|122aa|down_6|NC_009328.1_2101200_2101566_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|161aa|down_7|NC_009328.1_2101591_2102074_-	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family	NA|76aa|down_8|NC_009328.1_2102122_2102350_-	cd00291, SirA_YedF_YeeD, SirA, YedF, and YeeD	NA|87aa|down_9|NC_009328.1_2102453_2102714_-	cd10155, BsYrkD-like_DUF156, Uncharacterized protein YrkD from Bacillus subtilis and related domains; this domain superfamily was previously known as part of DUF156
