assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000015725.1_ASM1572v1	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	1	107917-108082	1	PILER-CR	no		Cas9_archaeal	Orphan	GCGTCCGCTGACCGTCGAGAGGC	23	0	0	NA	NA	NA	2	2	Orphan	DEDDh,Cas9_archaeal,DinG,cas3,csa3,PD-DExK	NA|73aa|up_9|NC_008826.1_100055_100274_-,NA|306aa|up_8|NC_008826.1_100379_101297_-,NA|105aa|up_7|NC_008826.1_101316_101631_-,NA|312aa|up_5|NC_008826.1_102417_103353_-,NA|104aa|up_4|NC_008826.1_103349_103661_-,NA|191aa|up_0|NC_008826.1_106139_106712_+,NA|112aa|down_0|NC_008826.1_109060_109396_+,NA|155aa|down_2|NC_008826.1_111362_111827_+,NA|151aa|down_4|NC_008826.1_112760_113213_+,NA|122aa|down_5|NC_008826.1_113245_113611_+,NA|57aa|down_6|NC_008826.1_113607_113778_+,NA|144aa|down_7|NC_008826.1_113782_114214_+,NA|263aa|down_8|NC_008826.1_114225_115014_+,NA|137aa|down_9|NC_008826.1_115037_115448_+	NA|73aa|up_9|NC_008826.1_100055_100274_-	NA	NA|306aa|up_8|NC_008826.1_100379_101297_-	NA	NA|105aa|up_7|NC_008826.1_101316_101631_-	NA	NA|209aa|up_6|NC_008826.1_101842_102469_+	PRK05973, PRK05973, replicative DNA helicase; Provisional	NA|312aa|up_5|NC_008826.1_102417_103353_-	NA	NA|104aa|up_4|NC_008826.1_103349_103661_-	NA	NA|158aa|up_3|NC_008826.1_103680_104154_-	pfam06271, RDD, RDD family	NA|184aa|up_2|NC_008826.1_104233_104785_-	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	NA|338aa|up_1|NC_008826.1_104852_105866_-	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|191aa|up_0|NC_008826.1_106139_106712_+	NA	NA|112aa|down_0|NC_008826.1_109060_109396_+	NA	NA|629aa|down_1|NC_008826.1_109425_111312_+	pfam00580, UvrD-helicase, UvrD/REP helicase N-terminal domain	NA|155aa|down_2|NC_008826.1_111362_111827_+	NA	NA|258aa|down_3|NC_008826.1_111946_112720_+	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|151aa|down_4|NC_008826.1_112760_113213_+	NA	NA|122aa|down_5|NC_008826.1_113245_113611_+	NA	NA|57aa|down_6|NC_008826.1_113607_113778_+	NA	NA|144aa|down_7|NC_008826.1_113782_114214_+	NA	NA|263aa|down_8|NC_008826.1_114225_115014_+	NA	NA|137aa|down_9|NC_008826.1_115037_115448_+	NA
GCF_000015725.1_ASM1572v1	NC_008825	Methylibium petroleiphilum PM1, complete sequence	1	163534-163690	1	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,DinG,cas3,csa3,PD-DExK	Orphan	CTGCAACAAGGACGCCGGCGAGATGAAGGGCGACGAGCGCAAGGCCTTCATGAAG	55	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,DinG,cas3,csa3,PD-DExK	NA,NA	NA|306aa|up_9|NC_008825.1_152198_153116_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|170aa|up_8|NC_008825.1_153115_153625_+	COG3762, COG3762, Predicted membrane protein [Function unknown]	NA|261aa|up_7|NC_008825.1_153651_154434_+	pfam14347, DUF4399, Domain of unknown function (DUF4399)	NA|508aa|up_6|NC_008825.1_155770_157294_-	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed	NA|252aa|up_5|NC_008825.1_157293_158049_-	cd03218, ABC_YhbG, ATP-binding cassette component of YhbG transport system	NA|205aa|up_4|NC_008825.1_158045_158660_-	TIGR03002, outer_YhbN_LptA, lipopolysaccharide transport periplasmic protein LptA	NA|215aa|up_3|NC_008825.1_158767_159412_-	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|211aa|up_2|NC_008825.1_159471_160104_-	COG3087, FtsN, Cell division protein [Cell division and chromosome partitioning]	NA|562aa|up_1|NC_008825.1_160115_161801_-	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|448aa|up_0|NC_008825.1_161931_163275_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|410aa|down_0|NC_008825.1_163738_164968_-	pfam11249, DUF3047, Protein of unknown function (DUF3047)	NA|305aa|down_1|NC_008825.1_165117_166032_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|237aa|down_2|NC_008825.1_166141_166852_+	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase	NA|529aa|down_3|NC_008825.1_166877_168464_+	PRK09255, PRK09255, malate synthase; Validated	NA|446aa|down_4|NC_008825.1_168577_169915_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|189aa|down_5|NC_008825.1_170262_170829_+	PRK12537, PRK12537, RNA polymerase sigma factor; Provisional	NA|249aa|down_6|NC_008825.1_170816_171563_+	COG5343, COG5343, Uncharacterized protein conserved in bacteria [Function unknown]	NA|669aa|down_7|NC_008825.1_171656_173663_+	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I	NA|421aa|down_8|NC_008825.1_173718_174981_+	TIGR02032, Uncharacterized_protein_MJ1520, geranylgeranyl reductase family	NA|773aa|down_9|NC_008825.1_175111_177430_+	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]
GCF_000015725.1_ASM1572v1	NC_008825	Methylibium petroleiphilum PM1, complete sequence	2	2463129-2463262	2	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,DinG,cas3,csa3,PD-DExK	Orphan	GCGTACCGCGGCCACCCCCCGCGGGAGTCTCGGCCGGCTTGGGGC	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,DinG,cas3,csa3,PD-DExK	NA|330aa|up_8|NC_008825.1_2449763_2450753_-,NA|286aa|up_7|NC_008825.1_2450801_2451659_-,NA|253aa|up_6|NC_008825.1_2451700_2452459_-,NA|625aa|up_5|NC_008825.1_2452586_2454461_-,NA|141aa|down_1|NC_008825.1_2464084_2464507_+	NA|360aa|up_9|NC_008825.1_2448675_2449755_-	TIGR03593, yidC_nterm, membrane protein insertase, YidC/Oxa1 family, N-terminal domain	NA|330aa|up_8|NC_008825.1_2449763_2450753_-	NA	NA|286aa|up_7|NC_008825.1_2450801_2451659_-	NA	NA|253aa|up_6|NC_008825.1_2451700_2452459_-	NA	NA|625aa|up_5|NC_008825.1_2452586_2454461_-	NA	NA|908aa|up_4|NC_008825.1_2454549_2457273_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|397aa|up_3|NC_008825.1_2457640_2458831_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|718aa|up_2|NC_008825.1_2459027_2461181_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|345aa|up_1|NC_008825.1_2461392_2462427_+	pfam06850, PHB_depo_C, PHB de-polymerase C-terminus	NA|229aa|up_0|NC_008825.1_2462423_2463110_+	PRK06991, PRK06991, electron transport complex subunit RsxB	NA|213aa|down_0|NC_008825.1_2463334_2463973_+	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|141aa|down_1|NC_008825.1_2464084_2464507_+	NA	NA|311aa|down_2|NC_008825.1_2464503_2465436_+	COG4727, COG4727, Uncharacterized protein conserved in bacteria [Function unknown]	NA|195aa|down_3|NC_008825.1_2465495_2466080_+	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases	NA|189aa|down_4|NC_008825.1_2466041_2466608_-	TIGR03162, Adenosylcobalamin/alpha-ribazole_phosphatase, alpha-ribazole phosphatase	NA|277aa|down_5|NC_008825.1_2466637_2467468_-	PRK00235, cobS, cobalamin synthase; Reviewed	NA|353aa|down_6|NC_008825.1_2467464_2468523_-	pfam02277, DBI_PRT, Phosphoribosyltransferase	NA|509aa|down_7|NC_008825.1_2468524_2470051_-	PRK00784, PRK00784, cobyric acid synthase	NA|277aa|down_8|NC_008825.1_2470055_2470886_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|337aa|down_9|NC_008825.1_2470882_2471893_-	pfam01032, FecCD, FecCD transport family
