assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000015245.1_ASM1524v1	NC_008700	Shewanella amazonensis SB2B, complete genome	1	544806-544901	1	CRISPRCasFinder	no		csa3,cas3,WYL,DinG,DEDDh	Orphan	TGGCTCAGTTTTGCCACAACCAGA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DinG,DEDDh	NA|84aa|up_8|NC_008700.1_532805_533057_+,NA|190aa|up_5|NC_008700.1_535309_535879_+,NA|616aa|down_1|NC_008700.1_547675_549523_-,NA|287aa|down_7|NC_008700.1_557075_557936_+,NA|201aa|down_8|NC_008700.1_557932_558535_+,NA|218aa|down_9|NC_008700.1_558531_559185_+	NA|304aa|up_9|NC_008700.1_531878_532790_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|84aa|up_8|NC_008700.1_532805_533057_+	NA	NA|431aa|up_7|NC_008700.1_533074_534367_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|194aa|up_6|NC_008700.1_534500_535082_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|190aa|up_5|NC_008700.1_535309_535879_+	NA	NA|238aa|up_4|NC_008700.1_535988_536702_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|756aa|up_3|NC_008700.1_536703_538971_+	PRK10604, PRK10604, sensor protein RstB; Provisional	NA|1152aa|up_2|NC_008700.1_539198_542654_+	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins	NA|442aa|up_1|NC_008700.1_542816_544142_-	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU	NA|175aa|up_0|NC_008700.1_544151_544676_-	PRK05456, PRK05456, ATP-dependent protease subunit HslV	NA|582aa|down_0|NC_008700.1_545442_547188_-	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	NA|616aa|down_1|NC_008700.1_547675_549523_-	NA	NA|732aa|down_2|NC_008700.1_549685_551881_-	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|261aa|down_3|NC_008700.1_551946_552729_+	TIGR03505, FimV_core, FimV N-terminal domain	NA|71aa|down_4|NC_008700.1_552876_553089_+	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed	NA|416aa|down_5|NC_008700.1_553591_554839_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|636aa|down_6|NC_008700.1_554988_556896_+	PRK11059, PRK11059, regulatory protein CsrD; Provisional	NA|287aa|down_7|NC_008700.1_557075_557936_+	NA	NA|201aa|down_8|NC_008700.1_557932_558535_+	NA	NA|218aa|down_9|NC_008700.1_558531_559185_+	NA
GCF_000015245.1_ASM1524v1	NC_008700	Shewanella amazonensis SB2B, complete genome	2	1588794-1588891	2	CRISPRCasFinder	no		csa3,cas3,WYL,DinG,DEDDh	Orphan	TGTGGCGAGGGCATGAAAAAAGGCCA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DinG,DEDDh	NA,NA	NA|405aa|up_9|NC_008700.1_1579902_1581117_+	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|128aa|up_8|NC_008700.1_1581147_1581531_+	PRK11325, PRK11325, scaffold protein; Provisional	NA|108aa|up_7|NC_008700.1_1581543_1581867_+	TIGR02011, Protein_yfhF	NA|175aa|up_6|NC_008700.1_1581876_1582401_+	PRK05014, hscB, co-chaperone HscB; Provisional	NA|620aa|up_5|NC_008700.1_1582455_1584315_+	PRK05183, hscA, chaperone protein HscA; Provisional	NA|112aa|up_4|NC_008700.1_1584323_1584659_+	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system	NA|302aa|up_3|NC_008700.1_1584816_1585722_+	PRK10446, PRK10446, 30S ribosomal protein S6--L-glutamate ligase	NA|144aa|up_2|NC_008700.1_1586190_1586622_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|118aa|up_1|NC_008700.1_1586763_1587117_-	pfam01258, zf-dskA_traR, Prokaryotic dksA/traR C4-type zinc finger	NA|318aa|up_0|NC_008700.1_1587304_1588258_-	PRK10550, PRK10550, tRNA dihydrouridine(16) synthase DusC	NA|279aa|down_0|NC_008700.1_1589044_1589881_+	PRK05409, PRK05409, hypothetical protein; Provisional	NA|253aa|down_1|NC_008700.1_1589877_1590636_+	COG3219, COG3219, Uncharacterized protein conserved in bacteria [Function unknown]	NA|108aa|down_2|NC_008700.1_1590997_1591321_+	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|182aa|down_3|NC_008700.1_1591485_1592031_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|910aa|down_4|NC_008700.1_1592156_1594886_+	PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional	NA|110aa|down_5|NC_008700.1_1595026_1595356_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|200aa|down_6|NC_008700.1_1595369_1595969_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|638aa|down_7|NC_008700.1_1596150_1598064_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|280aa|down_8|NC_008700.1_1598170_1599010_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|215aa|down_9|NC_008700.1_1599151_1599796_+	PRK00279, adk, adenylate kinase; Reviewed
GCF_000015245.1_ASM1524v1	NC_008700	Shewanella amazonensis SB2B, complete genome	3	1968006-1968098	3	CRISPRCasFinder	no		csa3,cas3,WYL,DinG,DEDDh	Orphan	GCAAAAACGCGACATTAGCTCAGT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DinG,DEDDh	NA,NA	NA|709aa|up_9|NC_008700.1_1954712_1956839_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|76aa|up_8|NC_008700.1_1956831_1957059_+	pfam05768, DUF836, Glutaredoxin-like domain (DUF836)	NA|639aa|up_7|NC_008700.1_1957060_1958977_+	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed	NA|626aa|up_6|NC_008700.1_1959004_1960882_+	pfam11949, DUF3466, Protein of unknown function (DUF3466)	NA|59aa|up_5|NC_008700.1_1961054_1961231_+	PRK14563, PRK14563, ribosome modulation factor; Provisional	NA|172aa|up_4|NC_008700.1_1961419_1961935_-	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA|577aa|up_3|NC_008700.1_1962013_1963744_-	COG1067, LonB, Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones]	NA|215aa|up_2|NC_008700.1_1964789_1965434_+	PRK09483, PRK09483, response regulator; Provisional	NA|607aa|up_1|NC_008700.1_1965436_1967257_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|183aa|up_0|NC_008700.1_1967305_1967854_+	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|388aa|down_0|NC_008700.1_1968632_1969796_+	pfam08378, NERD, Nuclease-related domain	NA|92aa|down_1|NC_008700.1_1969781_1970057_-	pfam00216, Bac_DNA_binding, Bacterial DNA-binding protein	NA|481aa|down_2|NC_008700.1_1970237_1971680_+	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown]	NA|183aa|down_3|NC_008700.1_1971826_1972375_+	pfam05951, Peptidase_M15_2, Bacterial protein of unknown function (DUF882)	NA|96aa|down_4|NC_008700.1_1973021_1973309_+	PRK05943, PRK05943, 50S ribosomal protein L25; Reviewed	NA|1298aa|down_5|NC_008700.1_1973504_1977398_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|613aa|down_6|NC_008700.1_1977394_1979233_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|345aa|down_7|NC_008700.1_1979375_1980410_+	pfam01112, Asparaginase_2, Asparaginase	NA|139aa|down_8|NC_008700.1_1980495_1980912_+	cd04629, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|1290aa|down_9|NC_008700.1_1981025_1984895_+	PRK11131, PRK11131, ATP-dependent RNA helicase HrpA; Provisional
GCF_000015245.1_ASM1524v1	NC_008700	Shewanella amazonensis SB2B, complete genome	4	3277998-3278102	4	CRISPRCasFinder	no		csa3,cas3,WYL,DinG,DEDDh	Orphan	AGAGCAGCGATCGCGCCAATGCTGAAGGAAAAC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DinG,DEDDh	NA,NA|468aa|down_4|NC_008700.1_3285916_3287320_-,NA|172aa|down_5|NC_008700.1_3287409_3287925_-,NA|176aa|down_8|NC_008700.1_3289905_3290433_+,NA|135aa|down_9|NC_008700.1_3290522_3290927_-	NA|190aa|up_9|NC_008700.1_3265981_3266551_-	pfam02525, Flavodoxin_2, Flavodoxin-like fold	NA|136aa|up_8|NC_008700.1_3266586_3266994_-	cd04769, HTH_MerR2, Helix-Turn-Helix DNA binding domain of MerR2-like transcription regulators	NA|349aa|up_7|NC_008700.1_3267019_3268066_-	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|310aa|up_6|NC_008700.1_3268190_3269120_-	pfam05661, DUF808, Protein of unknown function (DUF808)	NA|220aa|up_5|NC_008700.1_3269320_3269980_+	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|575aa|up_4|NC_008700.1_3270059_3271784_-	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ	NA|243aa|up_3|NC_008700.1_3271871_3272600_-	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional	NA|294aa|up_2|NC_008700.1_3272739_3273621_-	PRK00283, xerD, tyrosine recombinase	NA|446aa|up_1|NC_008700.1_3273767_3275105_-	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|234aa|up_0|NC_008700.1_3275609_3276311_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|403aa|down_0|NC_008700.1_3278432_3279641_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1068aa|down_1|NC_008700.1_3279640_3282844_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|213aa|down_2|NC_008700.1_3282977_3283616_+	TIGR04038, hypothetical_protein_MED92_00180, radical SAM protein, TatD family-associated	NA|740aa|down_3|NC_008700.1_3283707_3285927_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|468aa|down_4|NC_008700.1_3285916_3287320_-	NA	NA|172aa|down_5|NC_008700.1_3287409_3287925_-	NA	NA|252aa|down_6|NC_008700.1_3287917_3288673_-	smart00862, Trans_reg_C, Transcriptional regulatory protein, C terminal	NA|273aa|down_7|NC_008700.1_3289077_3289896_+	pfam14537, Cytochrom_c3_2, Cytochrome c3	NA|176aa|down_8|NC_008700.1_3289905_3290433_+	NA	NA|135aa|down_9|NC_008700.1_3290522_3290927_-	NA
GCF_000015245.1_ASM1524v1	NC_008700	Shewanella amazonensis SB2B, complete genome	5	3559694-3559797	5	CRISPRCasFinder	no		csa3,cas3,WYL,DinG,DEDDh	Orphan	GGCGCTGCTGGTCTGAATCCCATCAT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DinG,DEDDh	NA,NA|126aa|down_2|NC_008700.1_3564614_3564992_+	NA|209aa|up_9|NC_008700.1_3547987_3548614_-	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|255aa|up_8|NC_008700.1_3548615_3549380_-	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|405aa|up_7|NC_008700.1_3549369_3550584_-	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|456aa|up_6|NC_008700.1_3550583_3551951_-	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|90aa|up_5|NC_008700.1_3553113_3553383_+	pfam03927, NapD, NapD protein	NA|828aa|up_4|NC_008700.1_3553379_3555863_+	PRK13532, PRK13532, nitrate reductase catalytic subunit NapA	NA|242aa|up_3|NC_008700.1_3555903_3556629_+	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|304aa|up_2|NC_008700.1_3556625_3557537_+	PRK09477, napH, quinol dehydrogenase membrane component; Provisional	NA|144aa|up_1|NC_008700.1_3557533_3557965_+	pfam03892, NapB, Nitrate reductase cytochrome c-type subunit (NapB)	NA|300aa|up_0|NC_008700.1_3558040_3558940_-	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|566aa|down_0|NC_008700.1_3560020_3561718_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|681aa|down_1|NC_008700.1_3562174_3564217_+	TIGR03507, decahem_SO1788, decaheme c-type cytochrome, OmcA/MtrC family	NA|126aa|down_2|NC_008700.1_3564614_3564992_+	NA	NA|394aa|down_3|NC_008700.1_3565040_3566222_-	PRK11162, mltA, murein transglycosylase A; Provisional	NA|316aa|down_4|NC_008700.1_3566297_3567245_+	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|285aa|down_5|NC_008700.1_3567329_3568184_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|66aa|down_6|NC_008700.1_3568279_3568477_-	TIGR02443, Hypothetical_protein_yheV	NA|636aa|down_7|NC_008700.1_3568612_3570520_+	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional	NA|154aa|down_8|NC_008700.1_3570561_3571023_+	pfam09523, DUF2390, Protein of unknown function (DUF2390)	NA|564aa|down_9|NC_008700.1_3571164_3572856_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]
