The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_008610	Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), complete sequence	1160782	325601	335774	1160782		Bacillus_virus(33.33%)	7	NA	NA
WP_011737705.1|325601_327839_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	33.2	1.2e-75
WP_011737706.1|327940_328318_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	35.1	4.5e-12
WP_011737707.1|328314_329109_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA	NA
WP_011737708.1|329102_330197_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0B6VT43	Edwardsiella_phage	47.9	4.4e-84
WP_011737709.1|330298_332884_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	31.9	2.6e-103
WP_011737710.1|333759_335328_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.3	1.1e-32
WP_011737711.1|335327_335774_-	dCMP deaminase family protein	NA	A0A2H4N7Q7	Lake_Baikal_phage	62.0	1.9e-46
>prophage 2
NC_008610	Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), complete sequence	1160782	548463	555847	1160782		Staphylococcus_phage(50.0%)	9	NA	NA
WP_011737882.1|548463_550077_+	ABC-F family ATPase	NA	A0A2K9L3Z8	Tupanvirus	28.9	4.9e-63
WP_157834513.1|551053_551173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011737883.1|551173_551752_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	35.1	2.1e-24
WP_011737884.1|551761_552835_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	36.1	1.4e-53
WP_011737885.1|552845_553349_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	46.2	6.6e-27
WP_011737886.1|553351_553774_+	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_011737887.1|554197_554566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011737888.1|554951_555344_+	HIT family protein	NA	D7NW73	Streptomyces_phage	38.8	5.9e-15
WP_011737889.1|555355_555847_-	single-stranded DNA-binding protein	NA	D5LH30	Escherichia_phage	55.5	1.3e-40
>prophage 3
NC_008610	Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), complete sequence	1160782	610987	630624	1160782	tRNA	Vibrio_phage(14.29%)	21	NA	NA
WP_011737936.1|610987_611599_+	guanylate kinase	NA	G0XXC0	Cowpox_virus	32.4	6.8e-18
WP_011737937.1|611647_612490_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	39.3	1.5e-36
WP_011737938.1|612559_612847_+	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	46.8	7.9e-17
WP_011737939.1|612859_614494_+	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	60.7	2.0e-173
WP_187145684.1|614727_616614_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	37.1	4.3e-95
WP_011737941.1|616606_617299_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	35.2	7.0e-27
WP_011737942.1|617404_617632_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	39.2	4.5e-07
WP_011737943.1|617709_618948_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_011737944.1|618997_619201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011737945.1|619224_621135_-	M3 family metallopeptidase	NA	A0A1V0SID3	Klosneuvirus	23.8	1.3e-38
WP_081425169.1|621340_621475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081425170.1|621455_621584_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011737946.1|621605_623258_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.3	2.3e-52
WP_011737947.1|623342_624425_+	iron-sulfur cluster carrier protein ApbC	NA	A0A1X9I5D6	Streptococcus_phage	32.2	4.0e-05
WP_011737948.1|625470_625809_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_011737949.1|625832_627677_-	Fe-S protein assembly chaperone HscA	NA	F2Y2E1	Organic_Lake_phycodnavirus	38.9	6.7e-101
WP_011737950.1|627692_628208_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_011737951.1|628220_628544_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	46.7	7.0e-22
WP_011737952.1|628550_628928_-	Fe-S cluster assembly scaffold IscU	NA	A0A2H4N7M4	Lake_Baikal_phage	76.6	1.2e-49
WP_011737953.1|628987_630202_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_011737954.1|630204_630624_-	Rrf2 family transcriptional regulator	NA	M4M9K8	Vibrio_phage	29.2	7.0e-06
