assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	1	288385-288477	1	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	CCCCGGGTCCAGACTGACGAGCGG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|353aa|up_9|NC_008554.1_277619_278678_+,NA|660aa|down_3|NC_008554.1_292504_294484_-,NA|621aa|down_9|NC_008554.1_304390_306253_-	NA|353aa|up_9|NC_008554.1_277619_278678_+	NA	NA|205aa|up_8|NC_008554.1_278821_279436_+	TIGR03848, MSMEG_4193, probable phosphomutase, MSMEG_4193 family	NA|257aa|up_7|NC_008554.1_279797_280568_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|222aa|up_6|NC_008554.1_280560_281226_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|379aa|up_5|NC_008554.1_281347_282484_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|472aa|up_4|NC_008554.1_282741_284157_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|566aa|up_3|NC_008554.1_284216_285914_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|114aa|up_2|NC_008554.1_286139_286481_-	COG3937, COG3937, Uncharacterized conserved protein [Function unknown]	NA|94aa|up_1|NC_008554.1_286841_287123_+	COG3357, COG3357, Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon [Transcription]	NA|368aa|up_0|NC_008554.1_287262_288366_+	COG2006, COG2006, Uncharacterized conserved protein [Function unknown]	NA|301aa|down_0|NC_008554.1_288480_289383_-	pfam09992, NAGPA, Phosphodiester glycosidase	NA|56aa|down_1|NC_008554.1_289786_289954_-	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|655aa|down_2|NC_008554.1_290424_292389_-	pfam03169, OPT, OPT oligopeptide transporter protein	NA|660aa|down_3|NC_008554.1_292504_294484_-	NA	NA|1591aa|down_4|NC_008554.1_294562_299335_-	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|245aa|down_5|NC_008554.1_299331_300066_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|215aa|down_6|NC_008554.1_300092_300737_-	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|375aa|down_7|NC_008554.1_301177_302302_-	COG4671, COG4671, Predicted glycosyl transferase [General function prediction only]	NA|390aa|down_8|NC_008554.1_303177_304347_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|621aa|down_9|NC_008554.1_304390_306253_-	NA
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	2	475038-475129	2	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	ATCCTGAAACCCCCTGACGCCCGGGCGACTT	31	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA,NA	NA|242aa|up_9|NC_008554.1_459106_459832_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|615aa|up_8|NC_008554.1_459850_461695_-	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|294aa|up_7|NC_008554.1_461730_462612_-	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|176aa|up_6|NC_008554.1_462835_463363_-	PRK06853, PRK06853, indolepyruvate oxidoreductase subunit beta; Reviewed	NA|617aa|up_5|NC_008554.1_463380_465231_-	TIGR03336, IOR_alpha, indolepyruvate ferredoxin oxidoreductase, alpha subunit	NA|504aa|up_4|NC_008554.1_465979_467491_-	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase	NA|508aa|up_3|NC_008554.1_467523_469047_-	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase	NA|721aa|up_2|NC_008554.1_469356_471519_-	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|186aa|up_1|NC_008554.1_471518_472076_-	pfam02589, LUD_dom, LUD domain	NA|461aa|up_0|NC_008554.1_472345_473728_+	TIGR00387, Glycolate_oxidase_subunit_glcD	NA|180aa|down_0|NC_008554.1_475486_476026_+	COG3945, COG3945, Uncharacterized conserved protein [Function unknown]	NA|397aa|down_1|NC_008554.1_476245_477436_+	pfam13023, HD_3, HD domain	NA|784aa|down_2|NC_008554.1_478112_480464_+	pfam13464, DUF4115, Domain of unknown function (DUF4115)	NA|213aa|down_3|NC_008554.1_480645_481284_-	PRK00698, tmk, thymidylate kinase; Validated	NA|207aa|down_4|NC_008554.1_481335_481956_-	cd11527, NTP-PPase_dUTPase, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|339aa|down_5|NC_008554.1_482018_483035_-	pfam02511, Thy1, Thymidylate synthase complementing protein	NA|263aa|down_6|NC_008554.1_483481_484270_+	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents	NA|259aa|down_7|NC_008554.1_484266_485043_+	pfam02405, MlaE, Permease MlaE	NA|147aa|down_8|NC_008554.1_485216_485657_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD	NA|202aa|down_9|NC_008554.1_485787_486393_+	pfam05494, MlaC, MlaC protein
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	3	485090-485176	3	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	GGGGACCCCGAGCGGGCGGGTTTCCAT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA,NA|162aa|down_8|NC_008554.1_491932_492418_-	NA|461aa|up_9|NC_008554.1_472345_473728_+	TIGR00387, Glycolate_oxidase_subunit_glcD	NA|438aa|up_8|NC_008554.1_473730_475044_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|180aa|up_7|NC_008554.1_475486_476026_+	COG3945, COG3945, Uncharacterized conserved protein [Function unknown]	NA|397aa|up_6|NC_008554.1_476245_477436_+	pfam13023, HD_3, HD domain	NA|784aa|up_5|NC_008554.1_478112_480464_+	pfam13464, DUF4115, Domain of unknown function (DUF4115)	NA|213aa|up_4|NC_008554.1_480645_481284_-	PRK00698, tmk, thymidylate kinase; Validated	NA|207aa|up_3|NC_008554.1_481335_481956_-	cd11527, NTP-PPase_dUTPase, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|339aa|up_2|NC_008554.1_482018_483035_-	pfam02511, Thy1, Thymidylate synthase complementing protein	NA|263aa|up_1|NC_008554.1_483481_484270_+	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents	NA|259aa|up_0|NC_008554.1_484266_485043_+	pfam02405, MlaE, Permease MlaE	NA|147aa|down_0|NC_008554.1_485216_485657_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD	NA|202aa|down_1|NC_008554.1_485787_486393_+	pfam05494, MlaC, MlaC protein	NA|249aa|down_2|NC_008554.1_486486_487233_+	cd09992, HDAC_classII, Histone deacetylases and histone-like deacetylases, classII	NA|279aa|down_3|NC_008554.1_487329_488166_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|138aa|down_4|NC_008554.1_488458_488872_-	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins	NA|76aa|down_5|NC_008554.1_488868_489096_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|451aa|down_6|NC_008554.1_489219_490572_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|100aa|down_7|NC_008554.1_491263_491563_-	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	NA|162aa|down_8|NC_008554.1_491932_492418_-	NA	NA|1148aa|down_9|NC_008554.1_492633_496077_-	pfam12950, TaqI_C, TaqI-like C-terminal specificity domain
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	4	644020-644237	4	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	TATGCCTGCAATCGGCCCGCGCGCGGATACGTCA	34	0	0	NA	NA	NA	3	3	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|185aa|up_1|NC_008554.1_642527_643082_+,NA|105aa|up_0|NC_008554.1_643229_643544_+,NA	NA|375aa|up_9|NC_008554.1_629405_630530_+	cd08170, GlyDH, Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation	NA|269aa|up_8|NC_008554.1_630709_631516_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|279aa|up_7|NC_008554.1_632093_632930_+	cd05233, SDR_c, classical (c) SDRs	NA|248aa|up_6|NC_008554.1_633700_634444_+	cd16894, MltD-like, Membrane-bound lytic murein transglycosylase D and similar proteins	NA|1136aa|up_5|NC_008554.1_635134_638542_-	COG1520, COG1520, FOG: WD40-like repeat [Function unknown]	NA|164aa|up_4|NC_008554.1_640254_640746_+	PHA02601, int, integrase; Provisional	NA|202aa|up_3|NC_008554.1_640782_641388_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|381aa|up_2|NC_008554.1_641428_642571_+	COG2856, COG2856, Predicted Zn peptidase [Amino acid transport and metabolism]	NA|185aa|up_1|NC_008554.1_642527_643082_+	NA	NA|105aa|up_0|NC_008554.1_643229_643544_+	NA	NA|1056aa|down_0|NC_008554.1_644553_647721_+	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains    SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]	NA|325aa|down_1|NC_008554.1_647800_648775_+	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family	NA|361aa|down_2|NC_008554.1_648778_649861_+	COG3178, COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]	NA|590aa|down_3|NC_008554.1_650092_651862_-	cd09610, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|467aa|down_4|NC_008554.1_651974_653375_-	TIGR00387, Glycolate_oxidase_subunit_glcD	NA|391aa|down_5|NC_008554.1_653890_655063_+	pfam07075, DUF1343, Protein of unknown function (DUF1343)	NA|222aa|down_6|NC_008554.1_655345_656011_-	TIGR02227, Inactive_signal_peptidase_IA	NA|351aa|down_7|NC_008554.1_656160_657213_+	pfam11104, PilM_2, Type IV pilus assembly protein PilM;	NA|196aa|down_8|NC_008554.1_657209_657797_+	pfam05137, PilN, Fimbrial assembly protein (PilN)	NA|196aa|down_9|NC_008554.1_657835_658423_+	pfam04350, PilO, Pilus assembly protein, PilO
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	5	806762-806871	5	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	GGGACGTATCCGCCCTGCGCAACGTGACGACAACGACC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|245aa|up_6|NC_008554.1_796445_797180_-,NA|245aa|up_5|NC_008554.1_797263_797998_-,NA|88aa|down_4|NC_008554.1_819102_819366_+	NA|327aa|up_9|NC_008554.1_792814_793795_-	PRK01060, PRK01060, endonuclease IV; Provisional	NA|438aa|up_8|NC_008554.1_794076_795390_+	PRK07492, PRK07492, adenylosuccinate lyase; Provisional	NA|248aa|up_7|NC_008554.1_795468_796212_+	pfam02633, Creatininase, Creatinine amidohydrolase	NA|245aa|up_6|NC_008554.1_796445_797180_-	NA	NA|245aa|up_5|NC_008554.1_797263_797998_-	NA	NA|699aa|up_4|NC_008554.1_798502_800599_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|51aa|up_3|NC_008554.1_800642_800795_-	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|263aa|up_2|NC_008554.1_800838_801627_-	TIGR01291, Nodulation_protein_J, ABC-2 type transporter, NodJ family	NA|308aa|up_1|NC_008554.1_801623_802547_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|371aa|up_0|NC_008554.1_803438_804551_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|1025aa|down_0|NC_008554.1_807225_810300_-	PRK08026, PRK08026, FliC/FljB family flagellin	NA|236aa|down_1|NC_008554.1_811509_812217_+	pfam07603, DUF1566, Protein of unknown function (DUF1566)	NA|911aa|down_2|NC_008554.1_812575_815308_-	pfam03200, Glyco_hydro_63, Glycosyl hydrolase family 63 C-terminal domain	NA|699aa|down_3|NC_008554.1_816525_818622_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|88aa|down_4|NC_008554.1_819102_819366_+	NA	NA|478aa|down_5|NC_008554.1_819577_821011_+	PRK12999, PRK12999, pyruvate carboxylase; Reviewed	NA|554aa|down_6|NC_008554.1_821140_822802_+	cd07937, DRE_TIM_PC_TC_5S, Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain	NA|295aa|down_7|NC_008554.1_822985_823870_+	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD	NA|889aa|down_8|NC_008554.1_823882_826549_+	cd17772, CBS_pair_DHH_polyA_Pol_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the DHH and nucleotidyltransferase (NT) domains	NA|159aa|down_9|NC_008554.1_826584_827061_-	cd01286, deoxycytidylate_deaminase, Deoxycytidylate deaminase domain
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	6	940424-940523	6	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	TTTCCTGGCCGAAGCGCATTCGGACG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|158aa|up_7|NC_008554.1_929367_929841_-,NA|147aa|up_6|NC_008554.1_930374_930815_+,NA	NA|265aa|up_9|NC_008554.1_926501_927296_+	TIGR02795, Uncharacterized_protein_in_oprL_3'region, tol-pal system protein YbgF	NA|611aa|up_8|NC_008554.1_927500_929333_+	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein	NA|158aa|up_7|NC_008554.1_929367_929841_-	NA	NA|147aa|up_6|NC_008554.1_930374_930815_+	NA	NA|261aa|up_5|NC_008554.1_930910_931693_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|447aa|up_4|NC_008554.1_931937_933278_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|1040aa|up_3|NC_008554.1_933380_936500_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|386aa|up_2|NC_008554.1_936499_937657_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|229aa|up_1|NC_008554.1_937653_938340_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|592aa|up_0|NC_008554.1_938604_940380_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|378aa|down_0|NC_008554.1_940582_941716_+	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	NA|447aa|down_1|NC_008554.1_942047_943388_-	pfam13646, HEAT_2, HEAT repeats	NA|356aa|down_2|NC_008554.1_943965_945033_-	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|322aa|down_3|NC_008554.1_945454_946420_-	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase	NA|162aa|down_4|NC_008554.1_946553_947039_-	pfam01668, SmpB, SmpB protein	NA|615aa|down_5|NC_008554.1_947056_948901_-	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|89aa|down_6|NC_008554.1_949037_949304_-	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|197aa|down_7|NC_008554.1_950206_950797_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|553aa|down_8|NC_008554.1_951106_952765_+	pfam14052, Caps_assemb_Wzi, Capsule assembly protein Wzi	NA|448aa|down_9|NC_008554.1_953332_954676_+	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	7	1060396-1060485	7	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	CAATGCCCCGCGCACCTGAGGAGGAGCCG	29	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA,NA	NA|573aa|up_9|NC_008554.1_1048013_1049732_-	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]	NA|163aa|up_8|NC_008554.1_1049849_1050338_-	pfam01257, 2Fe-2S_thioredx, Thioredoxin-like [2Fe-2S] ferredoxin	NA|116aa|up_7|NC_008554.1_1050837_1051185_-	pfam02256, Fe_hyd_SSU, Iron hydrogenase small subunit	NA|418aa|up_6|NC_008554.1_1051198_1052452_-	TIGR02512, Periplasmic_hydrogenase_large_subunit, [FeFe] hydrogenase, group A	NA|63aa|up_5|NC_008554.1_1053479_1053668_+	pfam10133, RNA_bind_2, Predicted RNA-binding protein	NA|352aa|up_4|NC_008554.1_1054013_1055069_+	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|159aa|up_3|NC_008554.1_1055117_1055594_+	PRK00203, rnhA, ribonuclease H; Reviewed	NA|503aa|up_2|NC_008554.1_1055967_1057476_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|491aa|up_1|NC_008554.1_1057476_1058949_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|449aa|up_0|NC_008554.1_1058987_1060334_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|234aa|down_0|NC_008554.1_1060878_1061580_-	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter	NA|258aa|down_1|NC_008554.1_1061572_1062346_-	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|346aa|down_2|NC_008554.1_1062365_1063403_-	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|291aa|down_3|NC_008554.1_1065174_1066047_-	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]	NA|376aa|down_4|NC_008554.1_1066390_1067518_-	cd06347, PBP1_ABC_LivK_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|244aa|down_5|NC_008554.1_1067619_1068351_-	cd14726, TraB_PrgY-like, TraB/PryY confer plasmid-borne pheromone resistance	NA|329aa|down_6|NC_008554.1_1068741_1069728_+	TIGR03466, HpnA, hopanoid-associated sugar epimerase	NA|332aa|down_7|NC_008554.1_1069758_1070754_+	TIGR03470, HpnH, hopanoid biosynthesis associated radical SAM protein HpnH	NA|307aa|down_8|NC_008554.1_1070746_1071667_+	pfam04240, Caroten_synth, Carotenoid biosynthesis protein	NA|270aa|down_9|NC_008554.1_1071586_1072396_-	cd17877, NP_MTAN-like, nucleoside phosphorylases similar to 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	8	1111772-1111869	8	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	TTACCTAGAAAATAGATTCCCGGGTGA	27	1	1	1111799-1111842	NC_008554.1_2606934-2606977	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|89aa|up_6|NC_008554.1_1102664_1102931_-,NA|119aa|up_3|NC_008554.1_1105141_1105498_+,NA|392aa|down_2|NC_008554.1_1115637_1116813_+	NA|194aa|up_9|NC_008554.1_1100245_1100827_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|201aa|up_8|NC_008554.1_1101106_1101709_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|145aa|up_7|NC_008554.1_1102233_1102668_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|89aa|up_6|NC_008554.1_1102664_1102931_-	NA	NA|296aa|up_5|NC_008554.1_1103443_1104331_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|157aa|up_4|NC_008554.1_1104490_1104961_+	pfam02566, OsmC, OsmC-like protein	NA|119aa|up_3|NC_008554.1_1105141_1105498_+	NA	NA|568aa|up_2|NC_008554.1_1105883_1107587_-	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|342aa|up_1|NC_008554.1_1107849_1108875_-	pfam12710, HAD, haloacid dehalogenase-like hydrolase	NA|617aa|up_0|NC_008554.1_1109256_1111107_-	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP)	NA|497aa|down_0|NC_008554.1_1112515_1114006_+	COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones]	NA|285aa|down_1|NC_008554.1_1114426_1115281_+	pfam01694, Rhomboid, Rhomboid family	NA|392aa|down_2|NC_008554.1_1115637_1116813_+	NA	NA|162aa|down_3|NC_008554.1_1117065_1117551_+	pfam04008, Adenosine_kin, Adenosine specific kinase	NA|536aa|down_4|NC_008554.1_1118156_1119764_+	pfam01590, GAF, GAF domain	NA|374aa|down_5|NC_008554.1_1119936_1121058_-	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition	NA|682aa|down_6|NC_008554.1_1121386_1123432_+	TIGR02026, BchE, magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase	NA|325aa|down_7|NC_008554.1_1123633_1124608_+	cd01301, rDP_like, renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics	NA|380aa|down_8|NC_008554.1_1124646_1125786_-	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]	NA|233aa|down_9|NC_008554.1_1125940_1126639_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	9	1571261-1571348	9	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	GCGGTCGCCGTGCGTGCGCGGGACAGGC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|116aa|up_0|NC_008554.1_1570638_1570986_-,NA	NA|333aa|up_9|NC_008554.1_1559536_1560535_-	cd16409, ParB_N_like, ParB N-terminal-like domain of bacterial and plasmid parABS partitioning systems	NA|302aa|up_8|NC_008554.1_1560518_1561424_-	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|272aa|up_7|NC_008554.1_1561698_1562514_+	COG3071, HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|471aa|up_6|NC_008554.1_1562618_1564031_+	TIGR02432, tRNAIle-lysidine_synthase, tRNA(Ile)-lysidine synthetase, N-terminal domain	NA|168aa|up_5|NC_008554.1_1564055_1564559_-	cd16226, EFh_CREC_Calumenin_like, EF-hand, calcium binding motif, found in calumenin, reticulocalbin-1 (RCN-1), reticulocalbin-3 (RCN-3), and similar proteins	NA|582aa|up_4|NC_008554.1_1564775_1566521_-	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|154aa|up_3|NC_008554.1_1566945_1567407_+	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)	NA|283aa|up_2|NC_008554.1_1567583_1568432_+	cd07336, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase	NA|430aa|up_1|NC_008554.1_1569041_1570331_+	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|116aa|up_0|NC_008554.1_1570638_1570986_-	NA	NA|1024aa|down_0|NC_008554.1_1571946_1575018_+	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit	NA|244aa|down_1|NC_008554.1_1575021_1575753_+	cd10559, W-FDH, tungsten-containing formate dehydrogenase, small subunit	NA|301aa|down_2|NC_008554.1_1575909_1576812_+	cd16341, FdhE, formate dehydrogenase accessory protein FdhE and similar proteins	NA|635aa|down_3|NC_008554.1_1577229_1579134_+	COG0427, ACH1, Acetyl-CoA hydrolase [Energy production and conversion]	NA|205aa|down_4|NC_008554.1_1579130_1579745_+	COG5663, COG5663, Uncharacterized conserved protein [Function unknown]	NA|221aa|down_5|NC_008554.1_1580040_1580703_+	PRK00513, minC, septum formation inhibitor; Reviewed	NA|264aa|down_6|NC_008554.1_1580774_1581566_+	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	NA|93aa|down_7|NC_008554.1_1581582_1581861_+	pfam03776, MinE, Septum formation topological specificity factor MinE	NA|80aa|down_8|NC_008554.1_1582150_1582390_+	pfam14451, Ub-Mut7C, Mut7-C ubiquitin	NA|76aa|down_9|NC_008554.1_1582761_1582989_-	pfam02229, PC4, Transcriptional Coactivator p15 (PC4)
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	10	1684126-1689168	10,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Type III-B,Type III-D,Type III-C,Type III-A	GACGGAGACAGAGCCCCGATTTGAGGGGATTGAGAC,GACGGAGACAGAGCCCCGATTTGAGGGGATTGAGAC,GACGGAGACAGAGCCCCGATTTGAGGGGATTGAGAC	36,36,36	0	0	NA	NA	NA:NA:NA	69,69,65	69	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	csx20|131aa|up_5|NC_008554.1_1676856_1677249_+,NA|17aa|down_1|NC_008554.1_1692593_1692644_-,NA|53aa|down_7|NC_008554.1_1699769_1699928_+,NA|139aa|down_8|NC_008554.1_1700426_1700843_+	csm3gr7|242aa|up_9|NC_008554.1_1671476_1672202_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|171aa|up_8|NC_008554.1_1672216_1672729_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|849aa|up_7|NC_008554.1_1672746_1675293_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|344aa|up_6|NC_008554.1_1675312_1676344_-	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	csx20|131aa|up_5|NC_008554.1_1676856_1677249_+	NA	csx1|449aa|up_4|NC_008554.1_1677238_1678585_+	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|486aa|up_3|NC_008554.1_1678883_1680341_+	COG0457, NrfG, FOG: TPR repeat [General function prediction only]	PrimPol|542aa|up_2|NC_008554.1_1680405_1682031_+	COG4951, COG4951, Uncharacterized protein conserved in bacteria [Function unknown]	cas1|351aa|up_1|NC_008554.1_1682180_1683233_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|93aa|up_0|NC_008554.1_1683280_1683559_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|785aa|down_0|NC_008554.1_1689481_1691836_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|17aa|down_1|NC_008554.1_1692593_1692644_-	NA	NA|524aa|down_2|NC_008554.1_1692761_1694333_-	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated	NA|372aa|down_3|NC_008554.1_1694891_1696007_-	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism]	NA|599aa|down_4|NC_008554.1_1695999_1697796_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|107aa|down_5|NC_008554.1_1698282_1698603_+	pfam18692, DUF5640, Family of unknown function (DUF5640)	NA|274aa|down_6|NC_008554.1_1698893_1699715_-	TIGR02001, gcw_chp, conserved hypothetical protein, proteobacterial	NA|53aa|down_7|NC_008554.1_1699769_1699928_+	NA	NA|139aa|down_8|NC_008554.1_1700426_1700843_+	NA	NA|469aa|down_9|NC_008554.1_1701059_1702466_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	11	1702547-1702639	11	CRISPRCasFinder	no	cas2	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Unclear	CTATTTTCATGCTTCGCGGGTGA	23	0	0	NA	NA	NA	1	1	Unclear	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|17aa|up_8|NC_008554.1_1692593_1692644_-,NA|53aa|up_2|NC_008554.1_1699769_1699928_+,NA|139aa|up_1|NC_008554.1_1700426_1700843_+,NA|170aa|down_0|NC_008554.1_1703238_1703748_+	NA|785aa|up_9|NC_008554.1_1689481_1691836_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|17aa|up_8|NC_008554.1_1692593_1692644_-	NA	NA|524aa|up_7|NC_008554.1_1692761_1694333_-	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated	NA|372aa|up_6|NC_008554.1_1694891_1696007_-	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism]	NA|599aa|up_5|NC_008554.1_1695999_1697796_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|107aa|up_4|NC_008554.1_1698282_1698603_+	pfam18692, DUF5640, Family of unknown function (DUF5640)	NA|274aa|up_3|NC_008554.1_1698893_1699715_-	TIGR02001, gcw_chp, conserved hypothetical protein, proteobacterial	NA|53aa|up_2|NC_008554.1_1699769_1699928_+	NA	NA|139aa|up_1|NC_008554.1_1700426_1700843_+	NA	NA|469aa|up_0|NC_008554.1_1701059_1702466_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|170aa|down_0|NC_008554.1_1703238_1703748_+	NA	NA|185aa|down_1|NC_008554.1_1703847_1704402_+	pfam02620, DUF177, Uncharacterized ACR, COG1399	NA|61aa|down_2|NC_008554.1_1704634_1704817_+	PRK12286, rpmF, 50S ribosomal protein L32; Reviewed	NA|354aa|down_3|NC_008554.1_1704849_1705911_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|390aa|down_4|NC_008554.1_1705979_1707149_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|264aa|down_5|NC_008554.1_1707177_1707969_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|400aa|down_6|NC_008554.1_1707965_1709165_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|248aa|down_7|NC_008554.1_1709678_1710422_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|419aa|down_8|NC_008554.1_1710505_1711762_+	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|147aa|down_9|NC_008554.1_1711803_1712244_+	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	12	1843038-1843129	12	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	TCTGACGGGCACATCGGTCCGTGAG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA,NA|114aa|down_7|NC_008554.1_1850892_1851234_+	NA|531aa|up_9|NC_008554.1_1832486_1834079_+	COG2985, COG2985, Predicted permease [General function prediction only]	NA|148aa|up_8|NC_008554.1_1834544_1834988_+	cd16370, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|585aa|up_7|NC_008554.1_1834984_1836739_+	COG2414, COG2414, Aldehyde:ferredoxin oxidoreductase [Energy production and conversion]	NA|209aa|up_6|NC_008554.1_1837048_1837675_+	COG4803, COG4803, Predicted membrane protein [Function unknown]	NA|120aa|up_5|NC_008554.1_1837800_1838160_+	pfam11964, SpoIIAA-like, SpoIIAA-like	NA|281aa|up_4|NC_008554.1_1838199_1839042_+	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|191aa|up_3|NC_008554.1_1839466_1840039_-	pfam00226, DnaJ, DnaJ domain	NA|247aa|up_2|NC_008554.1_1840266_1841007_-	sd00010, SLR, Sel1-like repeat	NA|127aa|up_1|NC_008554.1_1841028_1841409_-	pfam07238, PilZ, PilZ domain	NA|222aa|up_0|NC_008554.1_1842204_1842870_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|492aa|down_0|NC_008554.1_1843737_1845213_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|465aa|down_1|NC_008554.1_1845205_1846600_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|58aa|down_2|NC_008554.1_1846844_1847018_+	pfam04964, Flp_Fap, Flp/Fap pilin component	NA|72aa|down_3|NC_008554.1_1847189_1847405_+	COG3847, Flp, Flp pilus assembly protein, pilin Flp [Intracellular trafficking and secretion]	NA|188aa|down_4|NC_008554.1_1847840_1848404_+	pfam01478, Peptidase_A24, Type IV leader peptidase family	NA|293aa|down_5|NC_008554.1_1848457_1849336_+	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB	NA|483aa|down_6|NC_008554.1_1849387_1850836_+	COG4964, CpaC, Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion]	NA|114aa|down_7|NC_008554.1_1850892_1851234_+	NA	NA|161aa|down_8|NC_008554.1_1851560_1852043_+	pfam07811, TadE, TadE-like protein	NA|428aa|down_9|NC_008554.1_1852083_1853367_+	pfam09977, Tad_C, Putative Tad-like Flp pilus-assembly
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	13	2343394-2343489	13	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	GTTGCGCCGTTGCGTGAGCATCCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|201aa|up_7|NC_008554.1_2333899_2334502_-,NA|137aa|up_5|NC_008554.1_2335411_2335822_+,NA|394aa|down_2|NC_008554.1_2346341_2347523_+,NA|91aa|down_6|NC_008554.1_2352406_2352679_+	NA|202aa|up_9|NC_008554.1_2332154_2332760_+	smart00091, PAS, PAS domain	NA|327aa|up_8|NC_008554.1_2332863_2333844_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|201aa|up_7|NC_008554.1_2333899_2334502_-	NA	NA|224aa|up_6|NC_008554.1_2334626_2335298_-	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain	NA|137aa|up_5|NC_008554.1_2335411_2335822_+	NA	NA|341aa|up_4|NC_008554.1_2335814_2336837_-	PRK13930, PRK13930, rod shape-determining protein MreB; Provisional	NA|483aa|up_3|NC_008554.1_2336924_2338373_-	smart00267, GGDEF, diguanylate cyclase	NA|671aa|up_2|NC_008554.1_2338673_2340686_+	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|343aa|up_1|NC_008554.1_2340831_2341860_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|379aa|up_0|NC_008554.1_2341838_2342975_-	cd06829, PLPDE_III_CANSDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Carboxynorspermidine Decarboxylase	NA|393aa|down_0|NC_008554.1_2343498_2344677_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|268aa|down_1|NC_008554.1_2345307_2346111_+	cd05233, SDR_c, classical (c) SDRs	NA|394aa|down_2|NC_008554.1_2346341_2347523_+	NA	NA|789aa|down_3|NC_008554.1_2347823_2350190_+	pfam00350, Dynamin_N, Dynamin family	NA|302aa|down_4|NC_008554.1_2350092_2350998_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|263aa|down_5|NC_008554.1_2351279_2352068_-	pfam14371, DUF4412, Domain of unknown function (DUF4412)	NA|91aa|down_6|NC_008554.1_2352406_2352679_+	NA	NA|183aa|down_7|NC_008554.1_2352829_2353378_-	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E	NA|502aa|down_8|NC_008554.1_2353576_2355082_-	cd01563, Thr-synth_1, Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of  threonine from aspartate	NA|316aa|down_9|NC_008554.1_2355456_2356404_+	PRK13186, lpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	14	2360987-2361184	2,2	CRT,PILER-CR	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	CCCCGGGCGAAGGGACAAT,CTCCCCGGGCGAAGGGACAATCC	19,23	0	0	NA	NA	NA:NA	3,2	3	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|91aa|up_6|NC_008554.1_2352406_2352679_+,NA	NA|789aa|up_9|NC_008554.1_2347823_2350190_+	pfam00350, Dynamin_N, Dynamin family	NA|302aa|up_8|NC_008554.1_2350092_2350998_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|263aa|up_7|NC_008554.1_2351279_2352068_-	pfam14371, DUF4412, Domain of unknown function (DUF4412)	NA|91aa|up_6|NC_008554.1_2352406_2352679_+	NA	NA|183aa|up_5|NC_008554.1_2352829_2353378_-	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E	NA|502aa|up_4|NC_008554.1_2353576_2355082_-	cd01563, Thr-synth_1, Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of  threonine from aspartate	NA|316aa|up_3|NC_008554.1_2355456_2356404_+	PRK13186, lpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA|191aa|up_2|NC_008554.1_2356676_2357249_+	pfam14334, DUF4390, Domain of unknown function (DUF4390)	NA|742aa|up_1|NC_008554.1_2357258_2359484_+	COG5000, NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]	NA|477aa|up_0|NC_008554.1_2359542_2360973_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|473aa|down_0|NC_008554.1_2362422_2363841_-	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|494aa|down_1|NC_008554.1_2363837_2365319_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|630aa|down_2|NC_008554.1_2365349_2367239_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed	NA|115aa|down_3|NC_008554.1_2367259_2367604_-	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK	NA|173aa|down_4|NC_008554.1_2367600_2368119_-	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J	NA|179aa|down_5|NC_008554.1_2368234_2368771_-	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI	NA|332aa|down_6|NC_008554.1_2369010_2370006_-	pfam00146, NADHdh, NADH dehydrogenase	NA|788aa|down_7|NC_008554.1_2370045_2372409_-	PRK13292, PRK13292, NADH-quinone oxidoreductase subunit B/C/D	NA|137aa|down_8|NC_008554.1_2372405_2372816_-	pfam00507, Oxidored_q4, NADH-ubiquinone/plastoquinone oxidoreductase, chain 3	NA|107aa|down_9|NC_008554.1_2373549_2373870_-	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	15	2384314-2384394	14	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	CGACGTTCCCGTGGAACGTCCCT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|84aa|up_4|NC_008554.1_2374482_2374734_-,NA|84aa|up_2|NC_008554.1_2376888_2377140_-,NA|177aa|down_7|NC_008554.1_2394124_2394655_+	NA|179aa|up_9|NC_008554.1_2368234_2368771_-	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI	NA|332aa|up_8|NC_008554.1_2369010_2370006_-	pfam00146, NADHdh, NADH dehydrogenase	NA|788aa|up_7|NC_008554.1_2370045_2372409_-	PRK13292, PRK13292, NADH-quinone oxidoreductase subunit B/C/D	NA|137aa|up_6|NC_008554.1_2372405_2372816_-	pfam00507, Oxidored_q4, NADH-ubiquinone/plastoquinone oxidoreductase, chain 3	NA|107aa|up_5|NC_008554.1_2373549_2373870_-	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|84aa|up_4|NC_008554.1_2374482_2374734_-	NA	NA|606aa|up_3|NC_008554.1_2374730_2376548_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|84aa|up_2|NC_008554.1_2376888_2377140_-	NA	NA|1434aa|up_1|NC_008554.1_2377160_2381462_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|379aa|up_0|NC_008554.1_2383163_2384300_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|113aa|down_0|NC_008554.1_2384834_2385173_+	cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands	NA|229aa|down_1|NC_008554.1_2385383_2386070_-	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE)	NA|633aa|down_2|NC_008554.1_2386132_2388031_-	PRK09533, PRK09533, bifunctional transaldolase/phosoglucose isomerase; Validated	NA|322aa|down_3|NC_008554.1_2388198_2389164_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|819aa|down_4|NC_008554.1_2389396_2391853_-	PRK08166, PRK08166, NADH-quinone oxidoreductase subunit NuoG	NA|422aa|down_5|NC_008554.1_2391930_2393196_-	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]	NA|164aa|down_6|NC_008554.1_2393203_2393695_-	PRK07539, PRK07539, NADH-quinone oxidoreductase subunit NuoE	NA|177aa|down_7|NC_008554.1_2394124_2394655_+	NA	NA|220aa|down_8|NC_008554.1_2395127_2395787_-	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain	NA|285aa|down_9|NC_008554.1_2396321_2397176_+	pfam13531, SBP_bac_11, Bacterial extracellular solute-binding protein
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	16	2460068-2460167	15	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	GCGACACCCGCGAAGCATGAAAACAGGCTC	30	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|75aa|up_5|NC_008554.1_2453240_2453465_+,NA|170aa|up_0|NC_008554.1_2458973_2459483_+,NA|142aa|down_7|NC_008554.1_2469155_2469581_+,NA|400aa|down_9|NC_008554.1_2471129_2472329_+	NA|620aa|up_9|NC_008554.1_2448095_2449955_-	PRK08626, PRK08626, fumarate reductase flavoprotein subunit; Provisional	NA|222aa|up_8|NC_008554.1_2449965_2450631_-	cd00581, QFR_TypeB_TM, Quinol:fumarate reductase (QFR) Type B subfamily, transmembrane subunit;  QFR couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, the opposite reaction to that catalyzed by the related protein, succinate:quinone oxidoreductase (SQR)	NA|316aa|up_7|NC_008554.1_2451146_2452094_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|257aa|up_6|NC_008554.1_2452160_2452931_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|75aa|up_5|NC_008554.1_2453240_2453465_+	NA	NA|165aa|up_4|NC_008554.1_2453641_2454136_-	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|496aa|up_3|NC_008554.1_2454393_2455881_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|470aa|up_2|NC_008554.1_2456111_2457521_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|224aa|up_1|NC_008554.1_2457531_2458203_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|170aa|up_0|NC_008554.1_2458973_2459483_+	NA	NA|285aa|down_0|NC_008554.1_2460218_2461073_-	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|159aa|down_1|NC_008554.1_2461069_2461546_-	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|768aa|down_2|NC_008554.1_2461595_2463899_-	pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding domain of aldehyde dehydrogenase	NA|430aa|down_3|NC_008554.1_2463895_2465185_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|348aa|down_4|NC_008554.1_2465181_2466225_-	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate	NA|374aa|down_5|NC_008554.1_2466340_2467462_-	PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated	NA|438aa|down_6|NC_008554.1_2467467_2468781_-	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain	NA|142aa|down_7|NC_008554.1_2469155_2469581_+	NA	NA|297aa|down_8|NC_008554.1_2469818_2470709_-	smart00849, Lactamase_B, Metallo-beta-lactamase superfamily	NA|400aa|down_9|NC_008554.1_2471129_2472329_+	NA
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	17	3131653-3131746	16	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	TCACCCGCGAAGCATGAAAACAG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA,NA	NA|886aa|up_9|NC_008554.1_3114028_3116686_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|344aa|up_8|NC_008554.1_3116821_3117853_-	PRK09354, recA, recombinase A; Provisional	NA|191aa|up_7|NC_008554.1_3118034_3118607_-	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|425aa|up_6|NC_008554.1_3118581_3119856_-	PRK00549, PRK00549, competence damage-inducible protein A; Provisional	NA|389aa|up_5|NC_008554.1_3120049_3121216_-	pfam01969, DUF111, Protein of unknown function DUF111	NA|498aa|up_4|NC_008554.1_3122391_3123885_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|337aa|up_3|NC_008554.1_3123863_3124874_+	pfam06616, BsuBI_PstI_RE, BsuBI/PstI restriction endonuclease C-terminus	NA|303aa|up_2|NC_008554.1_3124930_3125839_+	COG1715, Mrr, Restriction endonuclease [Defense mechanisms]	NA|671aa|up_1|NC_008554.1_3126171_3128184_-	pfam07603, DUF1566, Protein of unknown function (DUF1566)	NA|750aa|up_0|NC_008554.1_3128921_3131171_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|851aa|down_0|NC_008554.1_3131891_3134444_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|143aa|down_1|NC_008554.1_3134855_3135284_+	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|263aa|down_2|NC_008554.1_3135707_3136496_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|515aa|down_3|NC_008554.1_3136780_3138325_+	pfam00498, FHA, FHA domain	NA|353aa|down_4|NC_008554.1_3138418_3139477_+	PRK04204, PRK04204, RNA 3'-terminal phosphate cyclase	NA|86aa|down_5|NC_008554.1_3139529_3139787_+	pfam04457, DUF504, Protein of unknown function (DUF504)	NA|86aa|down_6|NC_008554.1_3139971_3140229_-	TIGR02605, CxxC_CxxC_SSSS, putative regulatory protein, FmdB family	NA|308aa|down_7|NC_008554.1_3140777_3141701_+	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain	NA|288aa|down_8|NC_008554.1_3141804_3142668_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|687aa|down_9|NC_008554.1_3142980_3145041_-	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	18	3478585-3478736	3	PILER-CR	no	WYL,cas3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Type I-E	GTCTCTCGCGCCTGCGCGTGGACCGAAAAC	30	0	0	NA	NA	NA	2	2	TypeI-E	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA|104aa|up_9|NC_008554.1_3468707_3469019_+,NA|330aa|up_4|NC_008554.1_3471958_3472948_+,NA	NA|104aa|up_9|NC_008554.1_3468707_3469019_+	NA	NA|378aa|up_8|NC_008554.1_3469002_3470136_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|175aa|up_7|NC_008554.1_3470178_3470703_+	pfam05573, NosL, NosL	NA|155aa|up_6|NC_008554.1_3470718_3471183_+	pfam05573, NosL, NosL	NA|225aa|up_5|NC_008554.1_3471287_3471962_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|330aa|up_4|NC_008554.1_3471958_3472948_+	NA	NA|157aa|up_3|NC_008554.1_3473056_3473527_+	COG1342, COG1342, Predicted DNA-binding proteins [General function prediction only]	NA|126aa|up_2|NC_008554.1_3473825_3474203_+	COG1433, COG1433, Uncharacterized conserved protein [Function unknown]	NA|384aa|up_1|NC_008554.1_3474240_3475392_+	TIGR00619, Nuclease_SbcCD_subunit_D, exonuclease SbcD	NA|1021aa|up_0|NC_008554.1_3475391_3478454_+	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	WYL|335aa|down_0|NC_008554.1_3479428_3480433_+	pfam13280, WYL, WYL domain	cas3|855aa|down_1|NC_008554.1_3480614_3483179_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|518aa|down_2|NC_008554.1_3483196_3484750_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|160aa|down_3|NC_008554.1_3484753_3485233_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|385aa|down_4|NC_008554.1_3485267_3486422_+	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|203aa|down_5|NC_008554.1_3487097_3487706_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|down_6|NC_008554.1_3487708_3488629_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|121aa|down_7|NC_008554.1_3488609_3488972_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|260aa|down_8|NC_008554.1_3494179_3494959_-	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|417aa|down_9|NC_008554.1_3494955_3496206_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	19	3489022-3493873	17,3,4	CRISPRCasFinder,CRT,PILER-CR	no	WYL,cas3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Type I-E	GTGTTCCCCACGCGGGTGGGGATGAACCG,GTGTTCCCCACGCGGGTGGGGATGAACCG,GTGTTCCCCACGCGGGTGGGGATGAACCG	29,29,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	79,79,66	79	TypeI-E	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA,NA|74aa|down_3|NC_008554.1_3497651_3497873_-,NA|99aa|down_6|NC_008554.1_3501222_3501519_+,NA|184aa|down_8|NC_008554.1_3503883_3504435_+,NA|125aa|down_9|NC_008554.1_3504448_3504823_-	NA|384aa|up_9|NC_008554.1_3474240_3475392_+	TIGR00619, Nuclease_SbcCD_subunit_D, exonuclease SbcD	NA|1021aa|up_8|NC_008554.1_3475391_3478454_+	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	WYL|335aa|up_7|NC_008554.1_3479428_3480433_+	pfam13280, WYL, WYL domain	cas3|855aa|up_6|NC_008554.1_3480614_3483179_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|518aa|up_5|NC_008554.1_3483196_3484750_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|160aa|up_4|NC_008554.1_3484753_3485233_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|385aa|up_3|NC_008554.1_3485267_3486422_+	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|203aa|up_2|NC_008554.1_3487097_3487706_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|up_1|NC_008554.1_3487708_3488629_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|121aa|up_0|NC_008554.1_3488609_3488972_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|260aa|down_0|NC_008554.1_3494179_3494959_-	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|417aa|down_1|NC_008554.1_3494955_3496206_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|255aa|down_2|NC_008554.1_3496792_3497557_-	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)	NA|74aa|down_3|NC_008554.1_3497651_3497873_-	NA	NA|147aa|down_4|NC_008554.1_3498195_3498636_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|678aa|down_5|NC_008554.1_3498947_3500981_+	pfam17159, MASE3, Membrane-associated sensor domain	NA|99aa|down_6|NC_008554.1_3501222_3501519_+	NA	NA|421aa|down_7|NC_008554.1_3501918_3503181_+	pfam07787, TMEM43, Transmembrane protein 43	NA|184aa|down_8|NC_008554.1_3503883_3504435_+	NA	NA|125aa|down_9|NC_008554.1_3504448_3504823_-	NA
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	20	4030450-4030548	18	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	AATAGGTCCTATAAGACCTATAGGACCTGTCAAGA	35	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA,NA|86aa|down_4|NC_008554.1_4036336_4036594_+,NA|208aa|down_6|NC_008554.1_4036992_4037616_-	NA|263aa|up_9|NC_008554.1_4019679_4020468_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|329aa|up_8|NC_008554.1_4020539_4021526_-	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|226aa|up_7|NC_008554.1_4021537_4022215_-	PRK00024, PRK00024, DNA repair protein RadC	NA|212aa|up_6|NC_008554.1_4022254_4022890_-	pfam05494, MlaC, MlaC protein	NA|307aa|up_5|NC_008554.1_4023369_4024290_+	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|175aa|up_4|NC_008554.1_4024430_4024955_-	cd10553, PhsB_like, uncharacterized beta subfamily of DMSO Reductase similar to Desulfonauticus sp PhsB	NA|696aa|up_3|NC_008554.1_4025178_4027266_-	PRK15488, PRK15488, thiosulfate reductase PhsA; Provisional	NA|122aa|up_2|NC_008554.1_4027316_4027682_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|423aa|up_1|NC_008554.1_4028518_4029787_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|130aa|up_0|NC_008554.1_4029989_4030379_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|556aa|down_0|NC_008554.1_4030649_4032317_-	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|503aa|down_1|NC_008554.1_4032855_4034364_+	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|276aa|down_2|NC_008554.1_4034580_4035408_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|176aa|down_3|NC_008554.1_4035599_4036127_+	cd16352, CheD, chemotaxis protein CheD stimulates methylation of methyl-accepting chemotaxis proteins	NA|86aa|down_4|NC_008554.1_4036336_4036594_+	NA	NA|91aa|down_5|NC_008554.1_4036654_4036927_+	pfam04316, FlgM, Anti-sigma-28 factor, FlgM	NA|208aa|down_6|NC_008554.1_4036992_4037616_-	NA	NA|106aa|down_7|NC_008554.1_4037990_4038308_+	pfam03091, CutA1, CutA1 divalent ion tolerance protein	NA|412aa|down_8|NC_008554.1_4038332_4039568_-	pfam00815, Histidinol_dh, Histidinol dehydrogenase	NA|258aa|down_9|NC_008554.1_4039637_4040411_-	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]
GCF_000014965.1_ASM1496v1	NC_008554	Syntrophobacter fumaroxidans MPOB, complete sequence	21	4622570-4622658	19	CRISPRCasFinder	no		csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	Orphan	AACGAGATCCCGCCCGCGCGAACC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas9_archaeal,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,csx20,csx1,PrimPol,cas1,cas2,cas3,RT,DinG,WYL,cas8e,cse2gr11,cas7,cas6e	NA,NA|141aa|down_0|NC_008554.1_4623766_4624189_-,NA|81aa|down_3|NC_008554.1_4626323_4626566_-,NA|389aa|down_5|NC_008554.1_4627538_4628705_+,NA|355aa|down_6|NC_008554.1_4628697_4629762_+,NA|109aa|down_7|NC_008554.1_4630084_4630411_+,NA|113aa|down_9|NC_008554.1_4631295_4631634_+	NA|204aa|up_9|NC_008554.1_4605403_4606015_-	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase	NA|464aa|up_8|NC_008554.1_4606427_4607819_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|338aa|up_7|NC_008554.1_4608329_4609343_+	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed	NA|303aa|up_6|NC_008554.1_4609396_4610305_+	PRK08655, PRK08655, prephenate dehydrogenase; Provisional	NA|178aa|up_5|NC_008554.1_4610323_4610857_-	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|152aa|up_4|NC_008554.1_4612888_4613344_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|390aa|up_3|NC_008554.1_4613749_4614919_+	PRK00321, rdgC, recombination associated protein; Reviewed	NA|351aa|up_2|NC_008554.1_4614940_4615993_+	PRK06007, fliF, flagellar basal body M-ring protein FliF	NA|738aa|up_1|NC_008554.1_4616081_4618295_-	cd07545, P-type_ATPase_Cd-like, P-type heavy metal-transporting ATPase, similar to Staphylococcus aureus plasmid pI258 CadA, a cadmium-efflux ATPase	NA|1235aa|up_0|NC_008554.1_4618478_4622183_-	pfam13502, AsmA_2, AsmA-like C-terminal region	NA|141aa|down_0|NC_008554.1_4623766_4624189_-	NA	NA|529aa|down_1|NC_008554.1_4624185_4625772_-	smart00857, Resolvase, Resolvase, N terminal domain	NA|175aa|down_2|NC_008554.1_4625764_4626289_-	pfam11149, DUF2924, Protein of unknown function (DUF2924)	NA|81aa|down_3|NC_008554.1_4626323_4626566_-	NA	NA|208aa|down_4|NC_008554.1_4626868_4627492_+	PRK00215, PRK00215, transcriptional repressor LexA	NA|389aa|down_5|NC_008554.1_4627538_4628705_+	NA	NA|355aa|down_6|NC_008554.1_4628697_4629762_+	NA	NA|109aa|down_7|NC_008554.1_4630084_4630411_+	NA	NA|195aa|down_8|NC_008554.1_4630606_4631191_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|113aa|down_9|NC_008554.1_4631295_4631634_+	NA
