assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000014705.1_ASM1470v1	NC_008345	Shewanella frigidimarina NCIMB 400, complete sequence	1	3174510-3174618	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,RT	Orphan	GCTTTATTAAATCTGCGAGAAAGGTATCGT	30	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,RT	NA|556aa|up_0|NC_008345.1_3171383_3173051_-,NA|612aa|down_4|NC_008345.1_3179102_3180938_-	NA|654aa|up_9|NC_008345.1_3157871_3159833_+	TIGR03507, decahem_SO1788, decaheme c-type cytochrome, OmcA/MtrC family	NA|330aa|up_8|NC_008345.1_3159930_3160920_+	TIGR03508, decahem_SO, decaheme c-type cytochrome, DmsE family	NA|696aa|up_7|NC_008345.1_3160932_3163020_+	pfam11854, MtrB_PioB, Putative outer membrane beta-barrel porin, MtrB/PioB	NA|386aa|up_6|NC_008345.1_3163388_3164546_+	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms]	NA|453aa|up_5|NC_008345.1_3164675_3166034_+	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]	NA|390aa|up_4|NC_008345.1_3166054_3167224_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|547aa|up_3|NC_008345.1_3167454_3169095_+	TIGR03799, NOD_PanD_pyr, putative pyridoxal-dependent aspartate 1-decarboxylase	NA|348aa|up_2|NC_008345.1_3169815_3170859_-	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|86aa|up_1|NC_008345.1_3171107_3171365_+	pfam13495, Phage_int_SAM_4, Phage integrase, N-terminal SAM-like domain	NA|556aa|up_0|NC_008345.1_3171383_3173051_-	NA	NA|183aa|down_0|NC_008345.1_3174807_3175356_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|611aa|down_1|NC_008345.1_3175400_3177233_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|215aa|down_2|NC_008345.1_3177277_3177922_-	PRK09483, PRK09483, response regulator; Provisional	NA|140aa|down_3|NC_008345.1_3178172_3178592_-	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|612aa|down_4|NC_008345.1_3179102_3180938_-	NA	NA|570aa|down_5|NC_008345.1_3181359_3183069_-	PRK11089, PRK11089, PTS system glucose-specific transporter subunits  IIBC; Provisional	NA|343aa|down_6|NC_008345.1_3183148_3184177_-	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|715aa|down_7|NC_008345.1_3184411_3186556_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|580aa|down_8|NC_008345.1_3188073_3189813_+	COG1067, LonB, Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones]	NA|172aa|down_9|NC_008345.1_3189888_3190404_+	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase
GCF_000014705.1_ASM1470v1	NC_008345	Shewanella frigidimarina NCIMB 400, complete sequence	2	3390806-3390904	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,RT	Orphan	CGGACTACGTCCTGCTAAGGACAGC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,RT	NA|710aa|up_5|NC_008345.1_3380089_3382219_+,NA|114aa|up_3|NC_008345.1_3382584_3382926_-,NA	NA|275aa|up_9|NC_008345.1_3373868_3374693_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|216aa|up_8|NC_008345.1_3374727_3375375_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|374aa|up_7|NC_008345.1_3377798_3378920_-	cd17555, REC_RssB-like, phosphoacceptor receiver (REC) domain of Pseudomonas aeruginosa RssB and similar domains	NA|260aa|up_6|NC_008345.1_3378966_3379746_-	pfam04333, MlaA, MlaA lipoprotein	NA|710aa|up_5|NC_008345.1_3380089_3382219_+	NA	NA|104aa|up_4|NC_008345.1_3382230_3382542_+	COG2257, COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]	NA|114aa|up_3|NC_008345.1_3382584_3382926_-	NA	NA|323aa|up_2|NC_008345.1_3383711_3384680_+	pfam11383, DUF3187, Protein of unknown function (DUF3187)	NA|316aa|up_1|NC_008345.1_3384822_3385770_-	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|1630aa|up_0|NC_008345.1_3385773_3390663_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|381aa|down_0|NC_008345.1_3391218_3392361_-	pfam03022, MRJP, Major royal jelly protein	NA|215aa|down_1|NC_008345.1_3392372_3393017_-	cd02970, PRX_like2, Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs	NA|189aa|down_2|NC_008345.1_3393144_3393711_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|823aa|down_3|NC_008345.1_3394153_3396622_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|692aa|down_4|NC_008345.1_3396883_3398959_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|130aa|down_5|NC_008345.1_3399035_3399425_+	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators	NA|522aa|down_6|NC_008345.1_3400050_3401616_+	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|128aa|down_7|NC_008345.1_3401745_3402129_+	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|451aa|down_8|NC_008345.1_3402427_3403780_-	PRK10887, glmM, phosphoglucosamine mutase; Provisional	NA|296aa|down_9|NC_008345.1_3404158_3405046_-	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU
GCF_000014705.1_ASM1470v1	NC_008345	Shewanella frigidimarina NCIMB 400, complete sequence	3	3446947-3447045	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,RT	Orphan	CCTAGAAGCGAAGCGCACTATCCGCGTAGCGGCCTAG	37	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,RT	NA|368aa|up_7|NC_008345.1_3438653_3439757_-,NA	NA|338aa|up_9|NC_008345.1_3436725_3437739_-	pfam00762, Ferrochelatase, Ferrochelatase	NA|178aa|up_8|NC_008345.1_3437991_3438525_-	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|368aa|up_7|NC_008345.1_3438653_3439757_-	NA	NA|363aa|up_6|NC_008345.1_3440780_3441868_+	pfam00665, rve, Integrase core domain	NA|346aa|up_5|NC_008345.1_3442324_3443362_-	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|229aa|up_4|NC_008345.1_3443389_3444076_+	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins	NA|273aa|up_3|NC_008345.1_3444379_3445198_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|183aa|up_2|NC_008345.1_3445433_3445982_+	pfam02325, YGGT, YGGT family	NA|105aa|up_1|NC_008345.1_3446002_3446317_+	PRK05090, PRK05090, hypothetical protein; Validated	NA|154aa|up_0|NC_008345.1_3446352_3446814_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|214aa|down_0|NC_008345.1_3447115_3447757_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|380aa|down_1|NC_008345.1_3447757_3448897_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|619aa|down_2|NC_008345.1_3449101_3450958_+	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)	NA|314aa|down_3|NC_008345.1_3451413_3452355_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|271aa|down_4|NC_008345.1_3452765_3453578_-	pfam11101, DUF2884, Protein of unknown function (DUF2884)	NA|305aa|down_5|NC_008345.1_3453805_3454720_-	PRK00971, PRK00971, glutaminase; Provisional	NA|109aa|down_6|NC_008345.1_3454726_3455053_-	PRK11702, PRK11702, hypothetical protein; Provisional	NA|239aa|down_7|NC_008345.1_3455088_3455805_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|358aa|down_8|NC_008345.1_3456054_3457128_+	PRK10880, PRK10880, adenine DNA glycosylase	NA|93aa|down_9|NC_008345.1_3457162_3457441_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional
