assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000014645.1_ASM1464v1	NC_008601	Francisella tularensis subsp. novicida U112, complete genome	1	817260-818233	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,cas4	DEDDh,cas3,csa3,cas9,cas1,cas2,cas4,cas12a	Type II-C,Type II-B,Type II-A	CTAACAGTAGTTTACCAAATAATTCAGCAACTGAAAC,CTAACAGTAGTTTACCAAATAATTCAGCAACTGAAAC,CTAACAGTAGTTTACCAAATAATTCAGCAACTGAAAC	37,37,37	0	0	NA	NA	NA:NA:NA	13,13,13	13	TypeII-C,TypeII-B,TypeII-A	DEDDh,cas3,csa3,cas9,cas1,cas2,cas4,cas12a	NA,NA|118aa|down_3|NC_008601.1_820724_821078_-	NA|408aa|up_9|NC_008601.1_805176_806400_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|119aa|up_8|NC_008601.1_806420_806777_+	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones]	NA|184aa|up_7|NC_008601.1_806790_807342_+	TIGR03406, FeS_long_SufT, probable FeS assembly SUF system protein SufT	NA|163aa|up_6|NC_008601.1_807353_807842_+	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|82aa|up_5|NC_008601.1_807846_808092_+	PRK07118, PRK07118, Fe-S cluster domain-containing protein	NA|394aa|up_4|NC_008601.1_808198_809380_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	cas9|1630aa|up_3|NC_008601.1_810051_814941_+	cd09704, Csx12, CRISPR/Cas system-associated protein Cas9	cas1|319aa|up_2|NC_008601.1_814921_815878_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas2|98aa|up_1|NC_008601.1_816035_816329_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	cas4|197aa|up_0|NC_008601.1_816309_816900_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	NA|362aa|down_0|NC_008601.1_818939_820025_+	TIGR04545, rSAM_ahbD_hemeb, heme b synthase	NA|83aa|down_1|NC_008601.1_820017_820266_+	cd03418, GRX_GRXb_1_3_like, Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain	NA|150aa|down_2|NC_008601.1_820262_820712_+	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|118aa|down_3|NC_008601.1_820724_821078_-	NA	NA|323aa|down_4|NC_008601.1_821242_822211_-	COG3049, COG3049, Penicillin V acylase and related amidases [Cell envelope biogenesis, outer membrane]	NA|251aa|down_5|NC_008601.1_822305_823058_-	cd18095, SpoU-like_rRNA-MTase, SAM-dependent rRNA methylase related to SpoU-TrmH	NA|651aa|down_6|NC_008601.1_823199_825152_+	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter	NA|159aa|down_7|NC_008601.1_825144_825621_-	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family	NA|285aa|down_8|NC_008601.1_825749_826604_+	PRK05550, PRK05550, bifunctional methionine sulfoxide reductase B/A protein; Provisional	NA|401aa|down_9|NC_008601.1_826600_827803_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_000014645.1_ASM1464v1	NC_008601	Francisella tularensis subsp. novicida U112, complete genome	2	1187042-1187136	2	CRISPRCasFinder	no		DEDDh,cas3,csa3,cas9,cas1,cas2,cas4,cas12a	Orphan	AAAACTAAAGATGCCTTAAGTGACACTGG	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,cas9,cas1,cas2,cas4,cas12a	NA|112aa|up_3|NC_008601.1_1182982_1183318_-,NA|87aa|up_2|NC_008601.1_1183334_1183595_-,NA|82aa|down_1|NC_008601.1_1187658_1187904_+	NA|941aa|up_9|NC_008601.1_1174114_1176937_-	PRK14016, PRK14016, cyanophycin synthetase; Provisional	NA|248aa|up_8|NC_008601.1_1177060_1177804_+	cd00885, cinA, Competence-damaged protein	NA|251aa|up_7|NC_008601.1_1177792_1178545_-	cd08562, GDPD_EcUgpQ_like, Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins	NA|593aa|up_6|NC_008601.1_1178702_1180481_+	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB	NA|410aa|up_5|NC_008601.1_1180495_1181725_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|389aa|up_4|NC_008601.1_1181798_1182965_-	COG4637, COG4637, Predicted ATPase [General function prediction only]	NA|112aa|up_3|NC_008601.1_1182982_1183318_-	NA	NA|87aa|up_2|NC_008601.1_1183334_1183595_-	NA	NA|334aa|up_1|NC_008601.1_1183728_1184730_+	pfam00762, Ferrochelatase, Ferrochelatase	NA|465aa|up_0|NC_008601.1_1184714_1186109_+	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]	NA|102aa|down_0|NC_008601.1_1187287_1187593_+	pfam05239, PRC, PRC-barrel domain	NA|82aa|down_1|NC_008601.1_1187658_1187904_+	NA	NA|288aa|down_2|NC_008601.1_1188088_1188952_+	cd05355, SDR_c1, classical (c) SDR, subgroup 1	NA|77aa|down_3|NC_008601.1_1188963_1189194_+	COG4572, ChaB, Putative cation transport regulator [General function prediction only]	NA|332aa|down_4|NC_008601.1_1189303_1190299_-	cd09019, galactose_mutarotase_like, galactose mutarotase_like	NA|392aa|down_5|NC_008601.1_1190295_1191471_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|395aa|down_6|NC_008601.1_1191483_1192668_-	TIGR00895, transport_protein, benzoate transport	NA|503aa|down_7|NC_008601.1_1192743_1194252_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|1355aa|down_8|NC_008601.1_1194412_1198477_-	PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|96aa|down_9|NC_008601.1_1198493_1198781_-	pfam03937, Sdh5, Flavinator of succinate dehydrogenase
GCF_000014645.1_ASM1464v1	NC_008601	Francisella tularensis subsp. novicida U112, complete genome	3	1220436-1220598	3	CRISPRCasFinder	no		DEDDh,cas3,csa3,cas9,cas1,cas2,cas4,cas12a	Orphan	TTTGTTGTAGGGGCATCCCTTGTGGTTGCCATTATATCCATTATTTAAATC	51	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,cas9,cas1,cas2,cas4,cas12a	NA|139aa|up_9|NC_008601.1_1210132_1210549_-,NA|233aa|up_0|NC_008601.1_1219527_1220226_-,NA|518aa|down_2|NC_008601.1_1225101_1226655_-	NA|139aa|up_9|NC_008601.1_1210132_1210549_-	NA	NA|298aa|up_8|NC_008601.1_1210563_1211457_-	PRK00089, era, GTPase Era; Reviewed	NA|398aa|up_7|NC_008601.1_1211570_1212764_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|269aa|up_6|NC_008601.1_1212773_1213580_-	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|213aa|up_5|NC_008601.1_1213583_1214222_-	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|378aa|up_4|NC_008601.1_1214225_1215359_-	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate	NA|291aa|up_3|NC_008601.1_1215421_1216294_+	TIGR03596, GTPase_YlqF, ribosome biogenesis GTP-binding protein YlqF	NA|584aa|up_2|NC_008601.1_1216357_1218109_+	sd00010, SLR, Sel1-like repeat	NA|483aa|up_1|NC_008601.1_1218098_1219547_-	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|233aa|up_0|NC_008601.1_1219527_1220226_-	NA	NA|408aa|down_0|NC_008601.1_1220792_1222016_-	cd17289, RMtype1_S_BamJRS5ORF1993P-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Bacillus amyloliquefaciens JRS5 S subunit (S	NA|783aa|down_1|NC_008601.1_1222620_1224969_-	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|518aa|down_2|NC_008601.1_1225101_1226655_-	NA	NA|606aa|down_3|NC_008601.1_1227076_1228894_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|252aa|down_4|NC_008601.1_1229065_1229821_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|602aa|down_5|NC_008601.1_1229836_1231642_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|307aa|down_6|NC_008601.1_1231697_1232618_-	pfam04333, MlaA, MlaA lipoprotein	NA|401aa|down_7|NC_008601.1_1232694_1233897_-	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA|102aa|down_8|NC_008601.1_1233938_1234244_-	pfam03658, Ub-RnfH, RnfH family Ubiquitin	NA|144aa|down_9|NC_008601.1_1234243_1234675_-	cd07813, COQ10p_like, Coenzyme Q-binding protein COQ10p and similar proteins
GCF_000014645.1_ASM1464v1	NC_008601	Francisella tularensis subsp. novicida U112, complete genome	4	1470758-1471379	4,2,2	CRISPRCasFinder,CRT,PILER-CR	no	csa3,cas2,cas1,cas4,cas12a	DEDDh,cas3,csa3,cas9,cas1,cas2,cas4,cas12a	Type V-A,Type I-A	ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGAC,ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGAC,ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGAC	36,36,36	0	0	NA	NA	V-A:V-A:V-A	9,9,4	9	TypeV-A,TypeI-A	DEDDh,cas3,csa3,cas9,cas1,cas2,cas4,cas12a	NA|134aa|up_8|NC_008601.1_1464366_1464768_+,NA|156aa|up_7|NC_008601.1_1464829_1465297_+,NA|239aa|down_5|NC_008601.1_1477951_1478668_-	NA|142aa|up_9|NC_008601.1_1463754_1464180_-	TIGR01951, nusB, transcription antitermination factor NusB	NA|134aa|up_8|NC_008601.1_1464366_1464768_+	NA	NA|156aa|up_7|NC_008601.1_1464829_1465297_+	NA	NA|149aa|up_6|NC_008601.1_1465518_1465965_+	PRK05170, PRK05170, YcgN family cysteine cluster protein	NA|207aa|up_5|NC_008601.1_1466004_1466625_+	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily	NA|250aa|up_4|NC_008601.1_1466617_1467367_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|229aa|up_3|NC_008601.1_1467368_1468055_-	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|565aa|up_2|NC_008601.1_1468099_1469794_-	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|173aa|up_1|NC_008601.1_1469815_1470334_-	COG0607, PspE, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	csa3|101aa|up_0|NC_008601.1_1470395_1470698_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	cas2|91aa|down_0|NC_008601.1_1471518_1471791_-	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	cas1|335aa|down_1|NC_008601.1_1471771_1472776_-	TIGR04329, hypothetical_protein_SbacW_07302_partial, CRISPR-associated endonuclease Cas1, subtype PREFRAN	cas4|179aa|down_2|NC_008601.1_1472779_1473316_-	TIGR04328, hypothetical_protein_HMPREF9709_01098, CRISPR-associated protein Cas4, subtype PREFRAN	cas12a|1301aa|down_3|NC_008601.1_1473441_1477344_-	TIGR04330, conserved_hypothetical_protein, CRISPR-associated protein Cpf1, subtype PREFRAN	NA|172aa|down_4|NC_008601.1_1477431_1477947_-	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|239aa|down_5|NC_008601.1_1477951_1478668_-	NA	NA|230aa|down_6|NC_008601.1_1478677_1479367_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|212aa|down_7|NC_008601.1_1479436_1480072_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|297aa|down_8|NC_008601.1_1480068_1480959_-	PRK01231, ppnK, NAD(+) kinase	NA|315aa|down_9|NC_008601.1_1481149_1482094_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1
