The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	66496	123762	2438589	bacteriocin,transposase,protease,tRNA	Bacillus_phage(33.33%)	54	NA	NA
WP_011675136.1|66496_67387_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011675137.1|67559_68027_+	universal stress protein	NA	NA	NA	NA	NA
WP_011675138.1|68153_68351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675139.1|68386_69007_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011675140.1|69074_70244_+	ring-cleaving dioxygenase	NA	NA	NA	NA	NA
WP_011675141.1|70254_70845_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003132258.1|70926_71076_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_010905107.1|71105_71279_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_011675142.1|71640_73422_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	29.4	3.7e-64
WP_011675145.1|74465_75251_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_011675146.1|75305_76565_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	45.5	5.1e-92
WP_011675147.1|76608_77097_-	GNAT family N-acetyltransferase	NA	A0A1B2ICF0	Erwinia_phage	50.9	1.1e-05
WP_011675148.1|77269_77737_+	DUF3013 family protein	NA	NA	NA	NA	NA
WP_011675149.1|77766_79320_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	27.9	1.2e-45
WP_011675150.1|79394_79679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675151.1|79712_80453_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011675152.1|80439_80928_+	YdeI/OmpD-associated family protein	NA	NA	NA	NA	NA
WP_011675153.1|80940_81894_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_011675154.1|82013_82766_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_011675155.1|82795_83752_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_011675156.1|83952_86175_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	U5J9N6	Bacillus_phage	28.3	2.2e-13
WP_011675157.1|87381_87837_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_011675158.1|87829_88834_+	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
WP_011675159.1|88836_89460_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_011675160.1|89593_90991_+	amino acid permease	NA	NA	NA	NA	NA
WP_011675161.1|91160_91802_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_011675162.1|91832_92342_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675163.1|93326_95924_+	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_011675164.1|96053_97091_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	35.5	2.7e-46
WP_011675165.1|97339_97606_+	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_011675166.1|97608_99336_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_011675167.1|99510_99819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675168.1|99908_100208_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_011675169.1|100312_100600_+	serine hydroxymethyltransferase	NA	NA	NA	NA	NA
WP_011675170.1|100879_101815_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011675172.1|102582_103365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675173.1|103550_103871_+	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
WP_011675174.1|103993_105157_+	MFS transporter	NA	NA	NA	NA	NA
WP_152023925.1|105539_106641_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	36.9	1.9e-34
WP_011675176.1|106726_107902_+|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	31.9	2.1e-31
WP_011675177.1|108941_110177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_120784986.1|110767_111879_-|transposase	IS3-like element IS981 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.8	7.2e-50
WP_011675181.1|114023_115217_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_011675182.1|115245_116625_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_011675183.1|116641_117838_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_011675184.1|118031_118607_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_031286668.1|118748_119117_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_011675186.1|119113_119923_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_011675187.1|120010_120925_+	protein jag	NA	NA	NA	NA	NA
WP_003131818.1|121056_121191_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_011675188.1|121368_122280_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_011675189.1|122349_122664_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011675190.1|122840_122999_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_011675191.1|123081_123762_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 2
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	278488	288398	2438589	integrase	Lactococcus_phage(90.91%)	15	278368:278391	289552:289575
278368:278391	attL	CAACAAAATGATGTAATTTCTTAT	NA	NA	NA	NA
WP_080513938.1|278488_279718_-|integrase	site-specific integrase	integrase	Q9AZI0	Lactococcus_phage	57.4	3.6e-127
WP_011675321.1|279777_280455_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011675322.1|280610_280841_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011675323.1|281057_281726_+	phage-encoded protein	NA	NA	NA	NA	NA
WP_011675324.1|281824_281995_+	DUF1655 domain-containing protein	NA	Q9AZH6	Lactococcus_phage	94.6	5.1e-24
WP_011675325.1|281996_282251_+	hypothetical protein	NA	Q9AZH5	Lactococcus_phage	91.3	7.7e-16
WP_011675327.1|282396_282666_+	hypothetical protein	NA	Q9AZH3	Lactococcus_phage	95.5	2.0e-38
WP_011675328.1|282676_284374_+	hypothetical protein	NA	Q9AZH2	Lactococcus_phage	98.4	3.7e-247
WP_003132807.1|284735_284918_+	hypothetical protein	NA	Q9AZH0	Lactococcus_phage	98.3	5.3e-27
WP_011675329.1|284936_285143_+	hypothetical protein	NA	Q9AZG9	Lactococcus_phage	98.5	2.8e-32
WP_011675330.1|285304_285877_+	hypothetical protein	NA	Q9AZG7	Lactococcus_phage	96.8	1.3e-95
WP_011675331.1|285892_286255_+	hypothetical protein	NA	Q9AZG6	Lactococcus_phage	95.0	1.0e-53
WP_011675332.1|286436_286607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675333.1|286808_287039_+	hypothetical protein	NA	A0A1P8BME4	Lactococcus_phage	92.1	3.6e-36
WP_041167514.1|287264_288398_+	DUF262 domain-containing protein	NA	A0A0R6PKN1	Moraxella_phage	26.8	9.7e-18
289552:289575	attR	CAACAAAATGATGTAATTTCTTAT	NA	NA	NA	NA
>prophage 3
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	408919	421076	2438589	tRNA	uncultured_virus(30.0%)	14	NA	NA
WP_011675460.1|408919_409237_+	thioredoxin family protein	NA	A0A0K2FIM3	Achromobacter_phage	31.9	9.0e-06
WP_011675461.1|409342_409969_+|tRNA	DUF4479 and tRNA-binding domain-containing protein	tRNA	NA	NA	NA	NA
WP_011675462.1|410130_411471_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011675463.1|411561_411951_+	single-stranded DNA-binding protein	NA	A0A218MNB4	uncultured_virus	45.7	2.9e-22
WP_011675464.1|412069_412354_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	43.0	2.3e-13
WP_011675465.1|412440_414069_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	2.2e-156
WP_011675466.1|414120_414933_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	38.1	1.5e-33
WP_031286625.1|415122_416478_-	PAS domain-containing protein	NA	W8CYF6	Bacillus_phage	32.9	3.7e-32
WP_003131580.1|416542_417244_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.7	1.2e-42
WP_011675469.1|417421_418057_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	66.0	2.7e-73
WP_011675470.1|418189_419050_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	44.8	3.1e-64
WP_011675471.1|419099_419882_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_011675472.1|419874_420201_+	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
WP_011675473.1|420200_421076_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	66.1	1.6e-100
>prophage 4
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	552374	680994	2438589	bacteriocin,tRNA,transposase,protease,integrase	Bacillus_phage(27.27%)	114	553487:553544	621008:621065
WP_152023927.1|552374_553486_-|transposase	IS3-like element IS981 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.8	7.2e-50
553487:553544	attL	GTTTTTGTCCTTTGTCTAAATTATACAATAGTGACTCTAAGATTTAAGGATAACATCA	NA	NA	NA	NA
WP_014573063.1|553751_554534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675588.1|554740_555058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675589.1|556130_556745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675590.1|556762_557806_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014573057.1|557811_558021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675592.1|558080_559205_+|integrase	site-specific integrase	integrase	A0A1S5SA77	Streptococcus_phage	29.1	3.9e-35
WP_011675593.1|559374_559944_+	thymidine kinase	NA	A0A1W6JJU6	Lactococcus_phage	53.7	1.3e-50
WP_011675594.1|559954_560398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675595.1|560415_561489_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_011675596.1|561488_562016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675598.1|562085_562841_+	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA	NA
WP_011675599.1|562945_563761_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_011675600.1|563791_564256_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011675601.1|564252_565173_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	32.8	2.2e-20
WP_011675602.1|565405_566653_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	54.3	8.3e-103
WP_011675603.1|566833_567436_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	38.2	2.0e-22
WP_011675604.1|567562_568660_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	61.4	1.9e-127
WP_011675605.1|568656_569853_+	3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	51.8	2.8e-116
WP_011675606.1|569898_570561_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_011675742.1|570597_570891_-	acylphosphatase	NA	NA	NA	NA	NA
WP_011675743.1|571002_571761_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_011675744.1|571972_572362_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_011675746.1|572667_573015_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675747.1|573028_573355_+	inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_011675748.1|573530_573974_-	flavodoxin	NA	A7KUZ7	Bacillus_phage	32.5	3.2e-09
WP_011675750.1|575798_576428_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675751.1|576707_577562_+	methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_011675752.1|577584_578490_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_011675753.1|578592_579039_-	GtrA family protein	NA	NA	NA	NA	NA
WP_011675755.1|579947_580223_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_011675756.1|580325_580502_+	DUF3272 family protein	NA	NA	NA	NA	NA
WP_011675757.1|580634_581567_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_011675758.1|581628_582414_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_011675759.1|582580_583000_+	DUF948 domain-containing protein	NA	NA	NA	NA	NA
WP_011675760.1|583029_583590_+	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_011675761.1|583723_585142_+	NADP-dependent phosphogluconate dehydrogenase	NA	E3SJC4	Synechococcus_phage	33.0	8.4e-35
WP_011675762.1|585323_587345_+	potassium transporter Kup	NA	A7K9V6	Acanthocystis_turfacea_chlorella_virus	34.1	1.1e-64
WP_011675763.1|587559_589575_+	potassium transporter Kup	NA	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	31.8	2.6e-58
WP_011675764.1|589627_589798_-	DUF3042 family protein	NA	NA	NA	NA	NA
WP_011675765.1|589992_590658_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	29.8	2.3e-19
WP_011675766.1|590789_591674_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_011675767.1|591819_592488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675768.1|592652_593555_+	SPFH domain-containing protein	NA	A0A1V0SL90	Klosneuvirus	35.2	1.8e-35
WP_021213677.1|593803_594469_-	hypothetical protein	NA	A0A1P8BMN5	Lactococcus_phage	56.9	3.2e-13
WP_011675770.1|594928_595276_-	XRE family transcriptional regulator	NA	A0A182BQC8	Lactococcus_phage	75.4	1.6e-43
WP_011675771.1|596040_596964_+	ribonuclease Z	NA	NA	NA	NA	NA
WP_011675772.1|596956_597658_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011675773.1|597830_600059_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	31.1	8.7e-79
WP_011675774.1|600182_600695_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	44.0	4.1e-32
WP_011675775.1|600885_601449_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_011675776.1|601584_603225_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_011675777.1|603285_603756_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_101961467.1|603847_605222_+|transposase	IS3-like element ISLla3 family transposase	transposase	A0A1B1P773	Bacillus_phage	43.3	1.3e-53
WP_152023928.1|605277_606425_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.0	1.7e-46
WP_011675608.1|606671_607127_+	CtsR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675609.1|607116_609567_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	34.0	1.3e-123
WP_011675610.1|609701_610259_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_010905473.1|610446_611748_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	87.6	4.0e-217
WP_011675611.1|611835_612771_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	27.8	3.0e-25
WP_011675613.1|613043_613811_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675614.1|613923_614121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675534.1|614117_615293_-|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	32.3	2.5e-32
WP_011675615.1|615914_616064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675616.1|616064_616955_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011675617.1|617496_617673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675618.1|617710_618979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675620.1|619711_620602_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_080513946.1|620738_620840_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_152023929.1|621065_622176_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.0	2.3e-48
621008:621065	attR	TGATGTTATCCTTAAATCTTAGAGTCACTATTGTATAATTTAGACAAAGGACAAAAAC	NA	NA	NA	NA
WP_011675623.1|622233_622959_+	abortive phage infection protein	NA	NA	NA	NA	NA
WP_011675624.1|623587_624586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101961446.1|624828_625940_-|transposase	IS3-like element IS981 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.2e-49
WP_011675626.1|626272_626944_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	7.2e-29
WP_011675627.1|626945_628019_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011675628.1|628030_628600_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675629.1|628786_630310_-	acyl-CoA synthetase	NA	NA	NA	NA	NA
WP_041167523.1|630556_631420_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_011675631.1|631680_634044_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	31.8	1.0e-106
WP_011675632.1|634274_634934_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_011675633.1|634936_636154_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_003129585.1|636150_636297_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_011675634.1|636674_637937_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_011675635.1|638041_641455_+	pyruvate carboxylase	NA	NA	NA	NA	NA
WP_011675636.1|645467_646706_+	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_011675637.1|646745_647345_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	52.6	9.3e-52
WP_011675638.1|647541_648072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003129597.1|648241_648640_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_011675640.1|648940_650104_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011675534.1|650160_651336_-|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	32.3	2.5e-32
WP_088792927.1|654489_655600_+|transposase	IS3-like element IS981 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.2e-49
WP_011675642.1|656021_656912_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_050748320.1|657225_658074_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_011675644.1|658160_659510_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_011675645.1|659726_659999_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_011675646.1|660002_660272_-	(4Fe-4S)-binding protein	NA	NA	NA	NA	NA
WP_031286717.1|660728_661502_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_011675648.1|661535_662069_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_011675649.1|662046_662607_+	ribonuclease M5	NA	NA	NA	NA	NA
WP_011675650.1|662736_663621_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_011675651.1|663728_664787_+	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_011675652.1|664918_665476_+	elongation factor P	NA	NA	NA	NA	NA
WP_011675653.1|665622_666024_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_011675654.1|666016_666994_+	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_011675655.1|667217_669221_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_011675656.1|669320_670463_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_041167435.1|671675_673124_+	glycogen synthase GlgA	NA	NA	NA	NA	NA
WP_011675658.1|673207_675610_+	glycogen/starch/alpha-glucan phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	40.2	1.9e-10
WP_011675659.1|675614_676505_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011675660.1|676846_678649_+	glycoside hydrolase family 13 protein	NA	NA	NA	NA	NA
WP_011675661.1|678724_678982_+	helix-turn-helix transcriptional regulator	NA	S5MAC0	Brevibacillus_phage	42.4	1.6e-05
WP_011675662.1|679081_679231_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011675663.1|679250_679949_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011675664.1|680139_680994_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	864025	905079	2438589	transposase,integrase	Streptococcus_phage(25.0%)	41	886090:886106	911525:911541
WP_011675813.1|864025_864916_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011675814.1|865104_867147_-	cadmium-translocating P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	25.4	4.2e-19
WP_011835499.1|867335_868193_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.0	2.6e-39
WP_031286477.1|868363_869617_+	exodeoxyribonuclease VII large subunit	NA	A0A2H4UVM9	Bodo_saltans_virus	32.3	1.2e-45
WP_011675817.1|869619_869859_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_011675818.1|870085_870976_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011675819.1|871034_872180_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	38.8	4.5e-47
WP_014572853.1|872404_873262_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_011675821.1|873262_873763_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011675822.1|873838_874645_+	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
WP_011675823.1|874641_875088_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_011675824.1|875267_876935_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_011675826.1|877636_878203_+	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
WP_011675827.1|878297_878819_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_011675828.1|878840_879767_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_011835489.1|879998_880952_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_011675830.1|881107_881488_+	cell division protein FtsL	NA	NA	NA	NA	NA
WP_011675831.1|881484_883782_+	penicillin-binding protein	NA	NA	NA	NA	NA
WP_011675832.1|883856_884846_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_011675833.1|885044_885329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675834.1|885479_886997_+	ABC transporter permease	NA	NA	NA	NA	NA
886090:886106	attL	ATGTTGTCATTGAATCA	NA	NA	NA	NA
WP_011675835.1|887104_887767_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	3.2e-21
WP_011675836.1|888126_889014_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675616.1|889272_890163_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011675837.1|890249_890924_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_011675838.1|891083_891428_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_011675839.1|891603_892020_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_011675840.1|892357_892819_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_021037017.1|893072_893582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675842.1|893574_894903_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_011675843.1|895133_895691_+	HdeD family acid-resistance protein	NA	NA	NA	NA	NA
WP_011675844.1|895753_895999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011675845.1|896270_896996_+	nicotinamide mononucleotide transporter	NA	A0A2P0ZKW0	Lactobacillus_phage	28.7	1.4e-14
WP_011675846.1|897138_897294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011675847.1|897548_897974_+	universal stress protein	NA	NA	NA	NA	NA
WP_011675848.1|898141_898504_+	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_011675849.1|898565_899099_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675850.1|899770_900661_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_003131392.1|902855_903188_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_041167441.1|903323_904298_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	28.6	8.6e-31
WP_010890648.1|904398_905079_+|transposase	IS6-like element ISS1S family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	84.5	8.5e-110
911525:911541	attR	ATGTTGTCATTGAATCA	NA	NA	NA	NA
>prophage 6
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	929536	995917	2438589	transposase	Staphylococcus_phage(23.08%)	52	NA	NA
WP_011675872.1|929536_930712_+|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	32.3	2.5e-32
WP_011675874.1|932403_933294_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011675875.1|933457_934366_+	phosphodiester glycosidase family protein	NA	NA	NA	NA	NA
WP_011675878.1|939176_940067_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011675879.1|940305_941421_+	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_011675881.1|942537_943773_+	phosphopentomutase	NA	NA	NA	NA	NA
WP_011675882.1|943830_944100_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_011675883.1|944170_944875_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_011675884.1|946132_946579_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_011675885.1|946662_946989_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011675886.1|947149_948817_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_011675887.1|948925_949519_+	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	43.0	1.4e-15
WP_011675888.1|949661_950510_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011675889.1|950778_951666_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_011675890.1|951677_952430_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.2	1.8e-28
WP_011675891.1|952431_952659_+	DUF4059 family protein	NA	NA	NA	NA	NA
WP_011675892.1|952856_953783_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.1	3.4e-85
WP_011675893.1|953923_954172_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_041167444.1|954413_956867_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	44.2	8.6e-104
WP_041167547.1|956885_957473_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_011675896.1|957550_958609_+	endonuclease	NA	NA	NA	NA	NA
WP_011675898.1|959727_959991_+	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_011675899.1|960107_961445_+	PFL family protein	NA	NA	NA	NA	NA
WP_011675900.1|961540_962020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675901.1|962090_962786_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_011675902.1|962782_963529_+	D-alanyl-D-alanine carboxypeptidase family protein	NA	NA	NA	NA	NA
WP_011675903.1|963543_963948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675904.1|964095_965139_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_014572780.1|965168_965708_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_011675956.1|965779_967603_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	45.8	3.4e-129
WP_011675957.1|967765_969610_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675958.1|969779_971543_+	oleate hydratase	NA	NA	NA	NA	NA
WP_011675959.1|971609_972749_+	amidohydrolase	NA	NA	NA	NA	NA
WP_011675960.1|972870_973572_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_011675961.1|973654_974572_+	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_011675962.1|974571_976476_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_152023931.1|976560_977935_+|transposase	IS3-like element ISLla3 family transposase	transposase	A0A1B1P773	Bacillus_phage	43.3	1.7e-53
WP_095586744.1|977991_979139_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.0	2.3e-46
WP_011675964.1|979416_980742_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_011675965.1|981205_981607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675967.1|983245_985108_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.5	4.9e-99
WP_011675968.1|985177_985405_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_011675969.1|985419_985959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011675970.1|985948_986638_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675971.1|986829_988275_+	cardiolipin synthase	NA	NA	NA	NA	NA
WP_011675972.1|988339_989227_+	RNase adapter RapZ	NA	NA	NA	NA	NA
WP_011675973.1|989223_990207_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	65.2	1.0e-119
WP_011675974.1|990302_991220_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	43.9	2.2e-60
WP_011675975.1|991252_991810_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011675976.1|992098_993007_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.5	2.6e-21
WP_011675977.1|993106_994609_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011675978.1|994741_995917_-|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	31.9	9.4e-32
>prophage 7
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	1000066	1013695	2438589		Enterococcus_phage(25.0%)	11	NA	NA
WP_011675982.1|1000066_1000759_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.8	1.6e-31
WP_011675983.1|1000751_1001687_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011675984.1|1001796_1002774_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	65.7	6.0e-117
WP_011675985.1|1003058_1005227_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	60.7	3.3e-256
WP_011675986.1|1005363_1005786_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	36.4	1.7e-12
WP_011675987.1|1005787_1006006_-	redoxin NrdH	NA	C3U2K9	Lactococcus_phage	47.6	5.8e-12
WP_011675988.1|1006179_1006821_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_011675989.1|1007099_1009034_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	43.4	1.8e-125
WP_011675992.1|1009668_1010502_+	3'-5' exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	40.0	5.3e-21
WP_011675993.1|1010498_1010948_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011675994.1|1011220_1013695_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.9	1.0e-96
>prophage 8
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	1021267	1110680	2438589	head,portal,tRNA,holin,transposase,protease,plate,tail,capsid,terminase,integrase	Lactococcus_phage(70.83%)	108	1029703:1029719	1059802:1059818
WP_011675978.1|1021267_1022443_+|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	31.9	9.4e-32
WP_011676002.1|1022824_1023277_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_011676003.1|1023339_1024245_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.8	6.0e-10
WP_011676004.1|1024402_1024846_+	divergent PAP2 family protein	NA	NA	NA	NA	NA
WP_152023931.1|1025099_1026474_+|transposase	IS3-like element ISLla3 family transposase	transposase	A0A1B1P773	Bacillus_phage	43.3	1.7e-53
WP_095586744.1|1026546_1027693_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.0	2.3e-46
WP_041167449.1|1027708_1029352_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_011676006.1|1029354_1030311_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	38.1	2.4e-49
1029703:1029719	attL	GAAAAATTTGAAAATGA	NA	NA	NA	NA
WP_011676007.1|1030438_1031125_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.1	2.5e-32
WP_011676008.1|1031145_1031661_+	DUF2127 domain-containing protein	NA	NA	NA	NA	NA
WP_011676009.1|1031664_1032990_+	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	30.4	9.6e-25
WP_011676010.1|1032999_1033656_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_011676011.1|1033837_1035655_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	Q76DQ7	Chlorella_virus	36.3	6.2e-91
WP_041167450.1|1035773_1036457_+	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_011676013.1|1036756_1037881_-|integrase	site-specific integrase	integrase	Q9B016	Lactococcus_phage	99.7	3.0e-213
WP_011676014.1|1038004_1038838_-	DUF4428 domain-containing protein	NA	X5JB37	Clostridium_phage	36.1	3.9e-16
WP_011676015.1|1038856_1039423_-	hypothetical protein	NA	A0A1P8BM30	Lactococcus_phage	58.8	2.5e-54
WP_011676016.1|1039451_1039799_-	XRE family transcriptional regulator	NA	Q9AZJ7	Lactococcus_phage	54.5	9.8e-30
WP_011676017.1|1040089_1040320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011676018.1|1040334_1041057_+	ORF6C domain-containing protein	NA	A0A1P8BLQ9	Lactococcus_phage	98.8	9.9e-133
WP_011676019.1|1041069_1041405_+	DUF771 domain-containing protein	NA	Q38331	Lactococcus_phage	99.1	2.2e-58
WP_010905685.1|1041542_1041737_+	hypothetical protein	NA	Q77JL6	Lactococcus_phage	100.0	3.0e-28
WP_010905686.1|1041733_1042009_-	hypothetical protein	NA	Q9AYU7	Lactococcus_phage	100.0	1.6e-46
WP_011676021.1|1042114_1042363_+	hypothetical protein	NA	A0A059NT64	Lactococcus_phage	96.3	1.6e-34
WP_011676022.1|1042465_1042855_+	hypothetical protein	NA	O48508	Lactococcus_phage	99.2	6.0e-68
WP_011676023.1|1042865_1043474_+	ERF family protein	NA	Q6JM07	Lactococcus_phage	97.0	3.1e-87
WP_011676024.1|1043473_1043824_+	single-stranded DNA-binding protein	NA	Q6JM06	Lactococcus_phage	95.7	1.2e-56
WP_011676025.1|1043957_1044767_+	helix-turn-helix domain-containing protein	NA	Q9MCG3	Lactococcus_phage	83.3	1.2e-110
WP_011676026.1|1044747_1044969_+	hypothetical protein	NA	Q94M91	Lactococcus_phage	100.0	1.9e-34
WP_011676027.1|1044958_1045348_+	RusA family crossover junction endodeoxyribonuclease	NA	R9QLL1	Lactococcus_phage	99.2	9.2e-69
WP_011676028.1|1045351_1045591_+	DUF1031 family protein	NA	Q38102	Lactococcus_phage	92.4	1.6e-34
WP_041167451.1|1045695_1045986_+	hypothetical protein	NA	Q9AZU9	Lactococcus_phage	99.0	2.7e-49
WP_011676030.1|1046007_1046187_+	DUF1497 domain-containing protein	NA	Q9MCB5	Lactococcus_phage	96.6	3.5e-23
WP_011676031.1|1046176_1046749_+	DUF658 family protein	NA	Q9AZU8	Lactococcus_phage	92.1	1.0e-84
WP_011676032.1|1046763_1047096_+	hypothetical protein	NA	Q9G0E0	Lactococcus_phage	94.1	2.3e-12
WP_011676033.1|1047119_1047479_+	hypothetical protein	NA	A0A1P8BLI9	Lactococcus_phage	95.0	1.5e-60
WP_139949456.1|1047450_1048137_+	DUF1642 domain-containing protein	NA	A0A1P8BMI6	Lactococcus_phage	54.5	1.2e-50
WP_011676035.1|1048133_1048298_+	hypothetical protein	NA	A0A1P8BKW3	Lactococcus_phage	100.0	3.5e-22
WP_011676037.1|1048438_1048894_+	dUTP diphosphatase	NA	Q9AYX8	Lactococcus_phage	99.3	8.0e-72
WP_011676038.1|1048912_1049098_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011676039.1|1049094_1049238_+	DUF1660 domain-containing protein	NA	O80276	Lactococcus_virus	74.5	6.7e-17
WP_011676040.1|1049245_1049431_+	hypothetical protein	NA	Q8LTR8	Lactococcus_phage	67.2	6.2e-15
WP_011676041.1|1049427_1049646_+	hypothetical protein	NA	A0A1P8BKA1	Lactococcus_phage	95.6	1.2e-30
WP_010905705.1|1049638_1049821_+	hypothetical protein	NA	Q9AZZ4	Lactococcus_phage	100.0	4.3e-29
WP_011676043.1|1050077_1050221_+	hypothetical protein	NA	Q9AZ69	Lactococcus_phage	97.9	2.7e-18
WP_011676044.1|1050297_1050720_+	RinA family protein	NA	Q9AZM9	Lactococcus_phage	99.3	3.2e-51
WP_011676045.1|1051167_1051635_+|transposase	transposase	transposase	A0A1P8BLJ8	Lactococcus_phage	95.4	2.2e-77
WP_011676046.1|1051627_1053016_+|terminase	phage terminase large subunit	terminase	Q8LTR4	Lactococcus_phage	99.4	2.1e-272
WP_011676047.1|1053016_1054378_+|portal	phage portal protein	portal	Q9AZ65	Lactococcus_phage	96.2	2.1e-245
WP_011676048.1|1054381_1055425_+|capsid	minor capsid protein	capsid	B5SP29	Lactococcus_phage	98.0	8.8e-191
WP_011676049.1|1055539_1056202_+	DUF4355 domain-containing protein	NA	Q9AZ62	Lactococcus_phage	97.7	1.8e-72
WP_011676050.1|1056203_1057022_+|capsid	N4-gp56 family major capsid protein	capsid	Q9AZ61	Lactococcus_phage	99.3	4.5e-142
WP_011676051.1|1057021_1057222_+	hypothetical protein	NA	B5SP32	Lactococcus_phage	100.0	9.6e-30
WP_011676052.1|1057205_1057538_+|head,tail	phage head-tail connector protein	head,tail	B5SP33	Lactococcus_phage	99.1	2.1e-53
WP_011676053.1|1057534_1057846_+	hypothetical protein	NA	A0A1P8BKV3	Lactococcus_phage	97.1	6.7e-54
WP_011676054.1|1057842_1058169_+	HK97 gp10 family phage protein	NA	A0A1L2K255	Streptococcus_phage	92.6	4.7e-50
WP_011676055.1|1058165_1058561_+	hypothetical protein	NA	A0A1P8BM84	Lactococcus_phage	97.7	2.2e-65
WP_011676056.1|1058571_1059081_+|tail	phage major tail protein, TP901-1 family	tail	Q77K19	Lactococcus_phage	98.8	1.8e-88
WP_011676057.1|1059196_1059547_+	hypothetical protein	NA	A0A1P8BLS4	Lactococcus_phage	98.3	5.6e-57
WP_011676058.1|1059630_1059900_+	hypothetical protein	NA	A0A1P8BKT4	Lactococcus_phage	97.8	7.3e-41
1059802:1059818	attR	GAAAAATTTGAAAATGA	NA	NA	NA	NA
WP_011676059.1|1059915_1062540_+	tape measure protein	NA	A0A1P8BM12	Lactococcus_phage	95.8	1.6e-249
WP_011676060.1|1062549_1063311_+|tail	phage tail family protein	tail	Q9AZ58	Lactococcus_phage	97.2	2.0e-139
WP_011676061.1|1063310_1066250_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A1P8BMB8	Lactococcus_phage	89.3	0.0e+00
WP_011676062.1|1066267_1068712_+|plate	BppU family phage baseplate upper protein	plate	A0A1P8BMJ5	Lactococcus_phage	89.8	1.4e-74
WP_050748311.1|1068782_1068995_+	hypothetical protein	NA	M1NSI3	Streptococcus_phage	83.6	2.0e-17
WP_011676064.1|1069109_1069412_+	hypothetical protein	NA	Q8LTP6	Lactococcus_phage	95.0	1.7e-49
WP_011676065.1|1069401_1069626_+|holin	holin	holin	Q9G090	Lactococcus_phage	98.6	2.5e-34
WP_011676066.1|1069622_1070912_+	LysM peptidoglycan-binding domain-containing protein	NA	Q9FZS8	Lactococcus_phage	99.8	1.4e-246
WP_011676067.1|1071110_1071410_+	hypothetical protein	NA	Q9AZG1	Lactococcus_phage	56.1	5.7e-26
WP_011676068.1|1071423_1072335_+	DUF4065 domain-containing protein	NA	Q9AZG0	Lactococcus_phage	89.0	1.1e-152
WP_041167453.1|1072398_1072581_+|holin	bacteriophage holin	holin	A0A1B1IN19	Lactococcus_phage	96.7	2.4e-27
WP_003132737.1|1072690_1073341_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_011676069.1|1073563_1073956_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_011676070.1|1074128_1076036_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.8	5.2e-48
WP_014572500.1|1076198_1076339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676071.1|1076456_1077086_+	orotate phosphoribosyltransferase	NA	Q58MW1	Prochlorococcus_phage	26.8	5.2e-05
WP_011676072.1|1077238_1078510_+	dihydroorotase	NA	NA	NA	NA	NA
WP_080513955.1|1078811_1079834_+	SEL1-like repeat protein	NA	NA	NA	NA	NA
WP_011675176.1|1081282_1082458_-|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	31.9	2.1e-31
WP_011676075.1|1082572_1083169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152023927.1|1083381_1084492_+|transposase	IS3-like element IS981 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.8	7.2e-50
WP_011676077.1|1084596_1084998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011676079.1|1085528_1087958_+	BspA family leucine-rich repeat surface protein	NA	NA	NA	NA	NA
WP_011676080.1|1088222_1088891_+	DnaD domain-containing protein	NA	C5J987	Streptococcus_phage	31.4	1.1e-05
WP_011676081.1|1088912_1089569_+	endonuclease III	NA	NA	NA	NA	NA
WP_011676082.1|1089561_1090251_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_011676083.1|1090247_1091021_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_011676084.1|1091055_1091421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676085.1|1091559_1092375_-	sugar-phosphatase	NA	NA	NA	NA	NA
WP_011676086.1|1092427_1093771_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	33.0	1.2e-27
WP_011676087.1|1093943_1094342_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_011676088.1|1094334_1095510_+	DUF998 domain-containing protein	NA	NA	NA	NA	NA
WP_003130644.1|1095679_1095994_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_011676089.1|1095996_1096332_+|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_003130646.1|1096333_1096618_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_011676090.1|1096984_1098406_+	Nramp family divalent metal transporter	NA	NA	NA	NA	NA
WP_021212212.1|1098479_1099448_+	PhoH family protein	NA	H6X2N1	Pseudomonas_phage	48.4	2.0e-48
WP_011676092.1|1099517_1100012_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_011676093.1|1100102_1100591_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_011676094.1|1100574_1101030_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_011676095.1|1101046_1101625_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_011676096.1|1101682_1102333_-	ComF family protein	NA	NA	NA	NA	NA
WP_011676097.1|1103683_1104319_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	54.5	6.6e-56
WP_011676098.1|1104926_1105946_+	DUF475 domain-containing protein	NA	A0A172Q0Y5	Acinetobacter_phage	43.4	5.2e-55
WP_011676099.1|1106054_1106822_+	5'-nucleotidase	NA	NA	NA	NA	NA
WP_011676100.1|1107058_1107706_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_011676101.1|1107705_1108659_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_011676102.1|1108658_1110680_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
>prophage 9
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	1202345	1271426	2438589	transposase,tRNA	Staphylococcus_phage(27.27%)	58	NA	NA
WP_088792927.1|1202345_1203457_-|transposase	IS3-like element IS981 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.2e-49
WP_011676291.1|1204168_1205236_+	DUF475 domain-containing protein	NA	A0A172Q0Y5	Acinetobacter_phage	41.5	1.2e-54
WP_011676292.1|1205398_1205731_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011676294.1|1206406_1207324_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_153927107.1|1208577_1208724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011676296.1|1208902_1209610_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011676297.1|1210213_1211284_+	tyrosine recombinase XerS	NA	NA	NA	NA	NA
WP_011676298.1|1211333_1212680_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_011676299.1|1212751_1214878_-	type I DNA topoisomerase	NA	E3T4K4	Cafeteria_roenbergensis_virus	37.6	1.9e-99
WP_011676300.1|1215143_1215992_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_011676301.1|1216140_1216521_-	RidA family protein	NA	NA	NA	NA	NA
WP_011676302.1|1216560_1217271_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_011676303.1|1218713_1219736_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_011676304.1|1219781_1220258_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_011676305.1|1220250_1221975_-	acetolactate synthase large subunit	NA	A9YVT5	Ostreococcus_tauri_virus	27.4	6.6e-42
WP_011676306.1|1221985_1223698_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_011676307.1|1223817_1224600_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.0	2.9e-13
WP_011676134.1|1225154_1226045_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676135.1|1226237_1226771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676136.1|1226770_1228147_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_011676137.1|1228203_1228656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676138.1|1228698_1229145_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_011676139.1|1229146_1230178_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_011676140.1|1230318_1231110_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_011676141.1|1231136_1231622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676142.1|1231657_1233199_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	37.5	2.3e-06
WP_011676143.1|1233621_1234581_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
WP_011676144.1|1234613_1235399_-	histidinol-phosphatase HisJ family protein	NA	NA	NA	NA	NA
WP_011676145.1|1235399_1236038_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA	NA
WP_011676146.1|1236034_1236814_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA	NA
WP_011676147.1|1236782_1237523_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA	NA
WP_011676148.1|1237522_1238131_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
WP_031286436.1|1238175_1238946_-	aminoglycoside 3'-phosphotransferase	NA	A0A193CJY5	Infectious_laryngotracheitis_virus	26.1	5.6e-09
WP_011676150.1|1238957_1239566_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
WP_011676151.1|1239566_1240874_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
WP_011676153.1|1241713_1242670_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_011676154.1|1242669_1243740_-	histidinol-phosphate transaminase	NA	NA	NA	NA	NA
WP_011676155.1|1244269_1245061_-	DUF1295 domain-containing protein	NA	NA	NA	NA	NA
WP_139949461.1|1245057_1246764_-	DegV family EDD domain-containing protein	NA	NA	NA	NA	NA
WP_011676156.1|1246823_1247678_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676157.1|1247905_1248268_-	DUF2177 family protein	NA	NA	NA	NA	NA
WP_011676158.1|1248343_1248823_-	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_011676159.1|1249141_1251145_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.6	3.2e-80
WP_011676160.1|1251287_1252463_-|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	32.7	1.4e-32
WP_011676161.1|1252671_1253004_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011676162.1|1253584_1254475_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676163.1|1254790_1255189_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011676164.1|1255296_1256442_+	MFS transporter	NA	NA	NA	NA	NA
WP_011676165.1|1256548_1258213_-	acetolactate synthase AlsS	NA	NA	NA	NA	NA
WP_011676166.1|1258367_1259624_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011676167.1|1259651_1260824_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_011676168.1|1260889_1261510_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011676169.1|1261511_1263119_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011676170.1|1263163_1264534_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	E4ZFI6	Streptococcus_phage	56.0	3.8e-141
WP_011676171.1|1264596_1265418_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011676172.1|1265555_1266260_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_011676174.1|1267737_1270083_-	HAD-IC family P-type ATPase	NA	NA	NA	NA	NA
WP_011676160.1|1270250_1271426_+|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	32.7	1.4e-32
>prophage 10
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	1516437	1526750	2438589		Synechococcus_phage(33.33%)	7	NA	NA
WP_011676465.1|1516437_1517994_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	46.5	1.6e-71
WP_011676466.1|1518170_1518713_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	30.6	4.7e-10
WP_011676467.1|1520001_1520532_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011676468.1|1520583_1522173_-	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	34.1	5.0e-12
WP_011676469.1|1522363_1522912_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	32.0	1.5e-19
WP_153927091.1|1522940_1523963_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.5	5.4e-60
WP_011676471.1|1524146_1526750_-	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	32.7	8.0e-124
>prophage 11
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	1607738	1619255	2438589		Bacillus_phage(25.0%)	12	NA	NA
WP_021037558.1|1607738_1609211_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	33.1	6.7e-27
WP_011676631.1|1609216_1609909_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.1	5.3e-35
WP_011676632.1|1610065_1610596_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_011676633.1|1610728_1610974_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_011676634.1|1611297_1611660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676635.1|1611896_1612808_-	CHAP domain-containing protein	NA	A0A1P8BMN5	Lactococcus_phage	45.6	3.4e-05
WP_011834858.1|1612900_1613737_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_011676637.1|1613848_1614253_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	47.4	1.3e-28
WP_011676638.1|1614689_1615460_+	hypothetical protein	NA	Q38326	Lactococcus_phage	75.2	6.3e-69
WP_011676639.1|1615620_1616694_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.1	1.5e-60
WP_011676640.1|1616781_1617714_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	30.5	1.3e-23
WP_011676641.1|1617962_1619255_-	uracil-xanthine permease	NA	Q9KX94	Enterobacteria_phage	35.7	8.1e-61
>prophage 12
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	1628464	1696599	2438589	bacteriocin,head,terminase,portal,holin,transposase,plate,capsid,tail	Lactococcus_phage(88.64%)	73	NA	NA
WP_011676653.1|1628464_1629355_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676655.1|1629985_1631542_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_011676656.1|1631620_1634674_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA	NA
WP_011676657.1|1634722_1636435_-	ribonuclease J	NA	NA	NA	NA	NA
WP_011676658.1|1636784_1637456_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	44.3	6.1e-20
WP_011676659.1|1637495_1638389_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_011676660.1|1638717_1639173_-	NUDIX domain-containing protein	NA	D0R7J3	Paenibacillus_phage	38.9	1.0e-26
WP_011676661.1|1639182_1640259_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_011676662.1|1640354_1641218_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_011676663.1|1641566_1641818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676664.1|1641985_1643962_-	transketolase	NA	NA	NA	NA	NA
WP_011676665.1|1644129_1645530_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA	NA
WP_011676666.1|1645582_1645882_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_139949467.1|1645883_1646447_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_011676384.1|1646470_1647361_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676669.1|1649004_1649646_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_011676671.1|1650596_1652015_-	glucuronate isomerase	NA	NA	NA	NA	NA
WP_011676672.1|1652027_1652909_-	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_011676673.1|1652968_1654495_-	MFS transporter	NA	NA	NA	NA	NA
WP_041167593.1|1654680_1655757_-	mannonate dehydratase	NA	NA	NA	NA	NA
WP_011676675.1|1655913_1657548_-	mannitol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011676494.1|1657931_1658612_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011676495.1|1658676_1660107_-	MFS transporter	NA	NA	NA	NA	NA
WP_011676496.1|1660465_1660771_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_011676497.1|1660775_1661000_-|bacteriocin	garvicin Q family class II bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011676498.1|1661214_1662093_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676499.1|1662074_1662275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_180350402.1|1662931_1663084_-|holin	bacteriophage holin	holin	A0A059NTA2	Lactococcus_phage	91.5	1.9e-17
WP_011676500.1|1663286_1664633_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1P8BMS7	Lactococcus_phage	95.5	5.9e-248
WP_011676501.1|1664629_1664896_-|holin	phage holin	holin	Q38613	Lactococcus_phage	98.9	9.5e-41
WP_011676502.1|1664920_1666972_-|plate	BppU family phage baseplate upper protein	plate	A0A1P8BMU0	Lactococcus_phage	73.2	2.6e-231
WP_011676503.1|1666984_1667209_-	hemolysin XhlA family protein	NA	A0A1B1IMU8	Lactococcus_phage	100.0	6.1e-33
WP_011676504.1|1667221_1667737_-	hypothetical protein	NA	Q9G096	Lactococcus_phage	50.6	1.3e-33
WP_050748323.1|1667755_1668652_-	hypothetical protein	NA	Q8LTP8	Lactococcus_phage	77.0	1.0e-123
WP_041167465.1|1669088_1670069_-|plate	BppU family phage baseplate upper protein	plate	B5SP43	Lactococcus_phage	97.2	5.9e-181
WP_011676506.1|1670081_1672871_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A1P8BLR1	Lactococcus_phage	96.9	0.0e+00
WP_011676507.1|1672870_1673632_-|tail	phage tail family protein	tail	Q9AYV7	Lactococcus_phage	96.4	8.2e-138
WP_011676508.1|1673645_1675859_-	tape measure protein	NA	Q8LTQ2	Lactococcus_phage	97.4	4.8e-295
WP_011676509.1|1675874_1676144_-	hypothetical protein	NA	A0A1P8BKT4	Lactococcus_phage	100.0	5.1e-42
WP_011676510.1|1676227_1676578_-	hypothetical protein	NA	A0A1P8BMH1	Lactococcus_phage	97.4	2.1e-56
WP_011676511.1|1676693_1677203_-|tail	phage major tail protein, TP901-1 family	tail	Q77K19	Lactococcus_phage	97.0	4.9e-86
WP_011676512.1|1677213_1677603_-	hypothetical protein	NA	Q38611	Lactococcus_phage	96.9	1.1e-64
WP_011676513.1|1677599_1677938_-	HK97 gp10 family phage protein	NA	Q77K21	Lactococcus_phage	95.5	1.6e-53
WP_011676514.1|1677934_1678246_-	hypothetical protein	NA	A0A1P8BMJ2	Lactococcus_phage	96.1	5.7e-53
WP_011676515.1|1678242_1678575_-|head,tail	phage head-tail connector protein	head,tail	A0A1L2JXP0	Streptococcus_phage	97.3	1.8e-52
WP_011676051.1|1678558_1678759_-	hypothetical protein	NA	B5SP32	Lactococcus_phage	100.0	9.6e-30
WP_011676516.1|1678758_1679535_-|capsid	N4-gp56 family major capsid protein	capsid	Q9AZ61	Lactococcus_phage	98.8	3.1e-132
WP_011676517.1|1679580_1680249_-	DUF4355 domain-containing protein	NA	Q9AZ62	Lactococcus_phage	99.1	1.9e-74
WP_011676518.1|1680433_1680781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011676519.1|1680740_1681082_-	hypothetical protein	NA	A0A1P8BM52	Lactococcus_phage	47.1	3.2e-09
WP_011676520.1|1681078_1682128_-|capsid	minor capsid protein	capsid	B5SP29	Lactococcus_phage	97.4	4.1e-188
WP_011676521.1|1682131_1683508_-|portal	phage portal protein	portal	Q9AZ65	Lactococcus_phage	94.8	4.5e-243
WP_011676522.1|1683522_1684911_-|terminase	phage terminase large subunit	terminase	Q9AZ66	Lactococcus_phage	98.5	3.1e-268
WP_011676523.1|1684903_1685314_-|terminase	terminase	terminase	Q9AZ67	Lactococcus_phage	100.0	1.4e-67
WP_011676524.1|1685622_1686045_-	RinA family protein	NA	Q9AZ68	Lactococcus_phage	96.4	7.2e-51
WP_011676525.1|1686122_1686329_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676526.1|1686457_1686751_-	DUF1359 domain-containing protein	NA	Q9AZ70	Lactococcus_phage	100.0	7.5e-47
WP_011676527.1|1686881_1687085_-	DUF1660 domain-containing protein	NA	Q8LTM1	Lactococcus_phage	100.0	1.1e-28
WP_011676528.1|1687081_1687312_-	hypothetical protein	NA	Q94M84	Lactococcus_phage	94.7	5.1e-35
WP_011676529.1|1687364_1687784_-	dUTP diphosphatase	NA	A5GYP0	Lactococcus_phage	99.3	6.7e-73
WP_011676530.1|1687780_1688092_-	hypothetical protein	NA	R9R1F9	Lactococcus_phage	98.6	4.5e-34
WP_011676531.1|1688088_1688703_-	DUF1642 domain-containing protein	NA	A5GYN9	Lactococcus_phage	56.7	2.4e-47
WP_011676532.1|1688695_1688902_-	DUF1125 domain-containing protein	NA	Q9MC26	Lactococcus_phage	98.5	7.6e-30
WP_011676533.1|1688902_1689163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676534.1|1689233_1689743_-	DUF658 family protein	NA	A0A1P8BM35	Lactococcus_phage	94.3	3.2e-77
WP_011676535.1|1689732_1689912_-	DUF1497 domain-containing protein	NA	Q9MCB5	Lactococcus_phage	100.0	5.4e-24
WP_041167598.1|1690023_1690263_-	DUF1031 family protein	NA	Q38102	Lactococcus_phage	97.5	5.7e-37
WP_011676537.1|1690275_1690665_-	RusA family crossover junction endodeoxyribonuclease	NA	R9QLL1	Lactococcus_phage	98.4	4.6e-68
WP_011676538.1|1690661_1691387_-	hypothetical protein	NA	A0A1P8BKN5	Lactococcus_phage	98.8	3.4e-133
WP_139949471.1|1691386_1691758_-	phage replisome organiser protein	NA	A0A1P8BLH6	Lactococcus_phage	100.0	3.9e-40
WP_152023927.1|1691807_1692918_+|transposase	IS3-like element IS981 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.8	7.2e-50
WP_011676540.1|1693188_1694163_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011676541.1|1695120_1696599_-	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.1	5.9e-15
>prophage 13
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	1822884	1884973	2438589	bacteriocin,transposase	Bacillus_phage(16.67%)	53	NA	NA
WP_162484995.1|1822884_1823996_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.1	3.6e-49
WP_011676762.1|1824016_1824757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676764.1|1825519_1825945_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_011676765.1|1826129_1827539_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_011676766.1|1827710_1828580_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_011676767.1|1828595_1830098_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_011676768.1|1830285_1830813_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010906128.1|1830814_1831321_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_004255255.1|1831335_1832049_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_004255250.1|1832095_1832311_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_011676769.1|1832493_1833270_-	esterase family protein	NA	NA	NA	NA	NA
WP_011676771.1|1833879_1834770_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676773.1|1837463_1838825_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011676774.1|1838821_1839751_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	3.1e-22
WP_011676775.1|1839856_1840255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676776.1|1840371_1840932_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_011676777.1|1841104_1842283_-	cation transporter	NA	NA	NA	NA	NA
WP_011676778.1|1842670_1843327_-	thiaminase II	NA	NA	NA	NA	NA
WP_011676779.1|1843545_1843848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676780.1|1843868_1844840_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_011676781.1|1844845_1845415_-	biotin transporter BioY	NA	NA	NA	NA	NA
WP_011676782.1|1845615_1846506_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676783.1|1846558_1847803_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_011676784.1|1847792_1848941_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_011676786.1|1849289_1849583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011676788.1|1850341_1851187_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_011676789.1|1851333_1854144_-	type VII secretion protein EsaA	NA	NA	NA	NA	NA
WP_162484997.1|1854206_1854563_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_011676791.1|1854672_1855335_-|bacteriocin	bacteriocin immunity protein	bacteriocin	Q9AZK7	Lactococcus_phage	37.1	1.9e-05
WP_152023938.1|1855541_1856652_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.6e-49
WP_011676793.1|1856685_1857099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676794.1|1857206_1857497_-	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
WP_011676795.1|1857868_1859281_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_011676796.1|1859376_1859835_-	SUF system NifU family Fe-S cluster assembly protein	NA	A0A218MM29	uncultured_virus	32.1	4.5e-06
WP_031286519.1|1859968_1860451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676798.1|1860452_1861670_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.6	1.6e-106
WP_011676799.1|1861669_1862926_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_011676800.1|1863065_1863836_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	25.7	4.7e-08
WP_011676801.1|1864011_1865337_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_011676802.1|1865339_1866041_-	adaptor protein MecA	NA	NA	NA	NA	NA
WP_011676803.1|1866168_1866903_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.8	1.8e-36
WP_011676804.1|1866902_1867589_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_011676805.1|1867734_1868643_-	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA	NA
WP_011676806.1|1868766_1872390_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.4	2.0e-72
WP_011676807.1|1872497_1876088_-	DNA-directed RNA polymerase subunit beta	NA	A0A2P0VMZ3	Tetraselmis_virus	24.5	8.3e-39
WP_011676808.1|1876356_1876956_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_011676809.1|1877191_1877866_+	helix-turn-helix transcriptional regulator	NA	S4TZZ1	uncultured_phage	43.1	1.0e-06
WP_011676810.1|1877980_1879864_+	peptidase M13	NA	E3T4I7	Cafeteria_roenbergensis_virus	30.6	1.6e-73
WP_011676811.1|1879912_1880218_-	MGMT family protein	NA	NA	NA	NA	NA
WP_011676812.1|1880287_1881961_-	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_011676813.1|1882171_1883623_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_011676814.1|1883704_1883965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676815.1|1884082_1884973_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	1947569	2015853	2438589	head,terminase,portal,tRNA,transposase,protease,capsid,tail,integrase	Lactococcus_phage(83.02%)	80	1976301:1976323	2015873:2015895
WP_011676874.1|1947569_1950368_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	26.1	1.9e-83
WP_011676875.1|1950817_1951753_-	DivIVA domain-containing protein	NA	NA	NA	NA	NA
WP_011676876.1|1951809_1952601_-	RNA-binding protein	NA	NA	NA	NA	NA
WP_011676877.1|1952597_1952873_-	YggT family protein	NA	NA	NA	NA	NA
WP_011676878.1|1952872_1953463_-	cell division protein SepF	NA	NA	NA	NA	NA
WP_011676879.1|1953496_1954174_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_011676880.1|1954177_1955431_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_011676881.1|1955460_1956831_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_011676882.1|1956993_1957863_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	33.8	2.5e-13
WP_011676883.1|1957979_1958708_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_011676884.1|1958900_1959791_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011676885.1|1959867_1960980_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_021211914.1|1961117_1961963_-	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	32.9	1.5e-31
WP_011676887.1|1961974_1963297_-	MFS transporter	NA	NA	NA	NA	NA
WP_011676889.1|1964788_1966099_-	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	31.7	1.5e-62
WP_011676890.1|1966227_1966902_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_011676891.1|1966919_1967423_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676892.1|1967559_1968240_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_011676893.1|1968267_1968546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676894.1|1968538_1969123_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_011676895.1|1969224_1970601_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	35.7	5.5e-31
WP_011676896.1|1970823_1971615_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	33.2	2.4e-31
WP_010906184.1|1971698_1971968_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_011676897.1|1972138_1974016_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	A0A1V0SDC3	Indivirus	32.4	9.8e-23
WP_011676898.1|1974015_1974792_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_011676899.1|1974914_1976189_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
1976301:1976323	attL	AACGTAACTAAAAACGTAACTAA	NA	NA	NA	NA
WP_011676900.1|1976476_1977103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041167469.1|1977213_1978152_-	glycosyltransferase family 2 protein	NA	V9QJB1	Oenococcus_phage	50.6	7.9e-82
WP_011676902.1|1978069_1979671_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_063284079.1|1979810_1980590_-	C40 family peptidase	NA	A0A1P8BKR7	Lactococcus_phage	96.9	2.0e-123
WP_011676904.1|1980890_1981262_-	hypothetical protein	NA	A0A1B1IMJ7	Lactococcus_phage	94.6	8.1e-22
WP_050748314.1|1981279_1982737_-	hypothetical protein	NA	A0A059NTA1	Lactococcus_phage	50.3	2.6e-92
WP_011676905.1|1982736_1982874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041167470.1|1982870_1985372_-	hypothetical protein	NA	A0A059NT86	Lactococcus_phage	83.2	0.0e+00
WP_011676906.1|1985383_1985749_-	hypothetical protein	NA	A0A059NT91	Lactococcus_phage	98.3	9.3e-63
WP_011676907.1|1985760_1990461_-|tail	tail protein	tail	A0A059NT57	Lactococcus_phage	96.8	0.0e+00
WP_011676908.1|1990492_1990864_-	hypothetical protein	NA	A0A059NT78	Lactococcus_phage	100.0	1.1e-47
WP_011676909.1|1990887_1991298_-	hypothetical protein	NA	A0A059NTA0	Lactococcus_phage	99.3	2.8e-68
WP_011676910.1|1991371_1991785_-	hypothetical protein	NA	A0A059NT84	Lactococcus_phage	92.0	1.3e-65
WP_011676911.1|1991797_1992160_-	hypothetical protein	NA	A0A059NT89	Lactococcus_phage	96.7	3.6e-59
WP_011676912.1|1992159_1992708_-	hypothetical protein	NA	A0A059NT55	Lactococcus_phage	100.0	6.0e-98
WP_041167471.1|1992691_1993045_-	hypothetical protein	NA	A0A059NT74	Lactococcus_phage	96.6	3.0e-58
WP_011676914.1|1993025_1993352_-|head,tail	phage head-tail connector protein	head,tail	A0A059NT99	Lactococcus_phage	95.5	1.1e-51
WP_011676915.1|1993372_1994491_-	Ig-like domain-containing protein	NA	A0A059NT82	Lactococcus_phage	98.1	1.1e-165
WP_041167616.1|1994502_1995159_-	DUF4355 domain-containing protein	NA	A0A182BQ92	Lactococcus_phage	89.9	1.5e-79
WP_011676917.1|1995323_1996430_-|capsid	minor capsid protein	capsid	A0A059NT80	Lactococcus_phage	98.4	1.9e-199
WP_011676918.1|1996435_1996723_-|protease	ribosomal-processing cysteine protease Prp	protease	A0A059NT85	Lactococcus_phage	95.8	5.6e-47
WP_041167618.1|1996719_1996950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676920.1|1996991_1997156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676921.1|1997112_1998621_-|portal	phage portal protein	portal	A0A182BQ97	Lactococcus_phage	97.8	1.0e-248
WP_011676922.1|1998629_1999865_-|terminase	PBSX family phage terminase large subunit	terminase	A0A182BQ98	Lactococcus_phage	96.4	2.6e-234
WP_011676923.1|1999854_2000367_-|terminase	terminase small subunit	terminase	A0A059NT97	Lactococcus_phage	91.2	2.3e-75
WP_003131928.1|2000662_2001088_-	DUF722 domain-containing protein	NA	A0A059NT50	Lactococcus_phage	100.0	1.3e-76
WP_011676924.1|2001164_2001473_-	hypothetical protein	NA	A0A1P8BKI6	Lactococcus_phage	92.2	9.6e-45
WP_011676925.1|2001805_2001991_-	hypothetical protein	NA	A0A1P8BKA3	Lactococcus_phage	62.3	1.1e-11
WP_011676926.1|2001998_2002193_-	DUF1660 domain-containing protein	NA	A0A1P8BLJ5	Lactococcus_phage	98.4	3.7e-34
WP_011676927.1|2002189_2002432_-	hypothetical protein	NA	R9QN74	Lactococcus_phage	76.2	3.9e-33
WP_011676928.1|2002482_2003169_-	hypothetical protein	NA	Q38108	Lactococcus_phage	96.9	7.7e-127
WP_011676929.1|2003155_2003467_-	hypothetical protein	NA	Q8H9H2	Lactococcus_phage	96.9	2.9e-49
WP_011676930.1|2003466_2003886_-	dUTP diphosphatase	NA	A5GYP0	Lactococcus_phage	97.8	9.6e-72
WP_011676931.1|2003882_2004239_-	hypothetical protein	NA	A0A1B1IMV9	Lactococcus_phage	69.5	9.4e-44
WP_011676932.1|2004235_2004757_-	DUF1642 domain-containing protein	NA	A0A059NT63	Lactococcus_phage	59.3	4.4e-42
WP_011676933.1|2004749_2004956_-	DUF1125 domain-containing protein	NA	A0A1P8BL00	Lactococcus_phage	100.0	2.4e-31
WP_011676934.1|2004969_2005494_-	hypothetical protein	NA	A0A059NT70	Lactococcus_phage	99.4	1.6e-92
WP_011676935.1|2005600_2005840_-	DUF1031 domain-containing protein	NA	Q9MBY5	Lactococcus_phage	100.0	6.1e-39
WP_011676937.1|2006250_2006472_-	hypothetical protein	NA	Q94M91	Lactococcus_phage	98.6	2.4e-34
WP_011676939.1|2007397_2007823_-	single-stranded DNA-binding protein	NA	Q9AZV6	Lactococcus_phage	95.0	5.7e-72
WP_011676940.1|2007815_2008574_-	hypothetical protein	NA	Q0ILF6	Lactococcus_phage	97.6	7.7e-144
WP_011676941.1|2008582_2008978_-	hypothetical protein	NA	Q0ILF7	Lactococcus_phage	98.5	5.5e-69
WP_011676942.1|2009076_2009313_-	DUF1408 domain-containing protein	NA	A5GYQ9	Lactococcus_phage	100.0	7.1e-40
WP_063282574.1|2009409_2009775_+	DUF2513 domain-containing protein	NA	A0A1Q1PVT8	Staphylococcus_phage	37.0	3.6e-14
WP_011676945.1|2010290_2010560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011676946.1|2010572_2011355_-	phage repressor protein/antirepressor Ant	NA	A0A1B1IMQ3	Lactococcus_phage	70.5	1.9e-89
WP_011676947.1|2011367_2011607_-	helix-turn-helix transcriptional regulator	NA	A0A1P8BKU7	Lactococcus_phage	94.9	1.4e-35
WP_011676948.1|2011704_2012214_+	hypothetical protein	NA	A0A1B1IMQ8	Lactococcus_phage	98.8	2.8e-89
WP_011676952.1|2012831_2013026_-	putative transcriptional regulator	NA	A0A1B1IMU6	Lactococcus_phage	94.8	1.0e-23
WP_011676953.1|2013288_2013816_+	helix-turn-helix domain-containing protein	NA	A0A1B1IMU5	Lactococcus_phage	52.2	6.5e-25
WP_011676954.1|2013821_2014256_+	zinc peptidase	NA	NA	NA	NA	NA
WP_011676955.1|2014269_2014605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011676956.1|2014671_2015853_+|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	47.5	6.9e-91
2015873:2015895	attR	AACGTAACTAAAAACGTAACTAA	NA	NA	NA	NA
>prophage 15
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	2116657	2184157	2438589	transposase,terminase,tRNA,integrase	Lactococcus_phage(61.54%)	70	2109820:2109837	2142384:2142401
2109820:2109837	attL	AAAGCTGTCAGTAAAATT	NA	NA	NA	NA
WP_011677045.1|2116657_2117068_-	DUF722 domain-containing protein	NA	Q9AZI2	Lactococcus_phage	90.4	3.2e-64
WP_011677046.1|2117064_2117508_-|terminase	terminase small subunit	terminase	Q9AZI3	Lactococcus_phage	83.0	1.3e-58
WP_011677047.1|2117640_2118183_-	hypothetical protein	NA	Q9AZI4	Lactococcus_phage	82.2	9.3e-51
WP_011677048.1|2118399_2120028_-	DNA primase	NA	Q9AZI5	Lactococcus_phage	91.7	9.2e-296
WP_011677049.1|2120038_2120833_-	bifunctional DNA primase/polymerase	NA	Q9AZI6	Lactococcus_phage	96.2	6.1e-152
WP_011677050.1|2120829_2121165_-	hypothetical protein	NA	Q9AZI7	Lactococcus_phage	90.7	2.0e-51
WP_011677052.1|2121412_2121652_-	hypothetical protein	NA	Q9AZJ0	Lactococcus_phage	93.7	2.0e-37
WP_011677053.1|2121694_2121976_-	hypothetical protein	NA	Q9AZJ1	Lactococcus_phage	94.6	1.8e-45
WP_011677054.1|2121972_2122224_-	helix-turn-helix transcriptional regulator	NA	Q9AZJ2	Lactococcus_phage	89.0	5.2e-33
WP_011677055.1|2122220_2122826_-	hypothetical protein	NA	Q9AZJ3	Lactococcus_phage	79.5	4.2e-60
WP_011677056.1|2122830_2123025_-	DUF1655 domain-containing protein	NA	Q9AZF2	Lactococcus_phage	95.3	1.1e-27
WP_011677057.1|2123143_2123392_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011677058.1|2123395_2123593_-	hypothetical protein	NA	Q9AZJ6	Lactococcus_phage	79.7	8.9e-20
WP_011677059.1|2123851_2124235_+	XRE family transcriptional regulator	NA	Q9AZJ7	Lactococcus_phage	70.1	1.4e-45
WP_011677060.1|2124246_2124798_+	hypothetical protein	NA	Q9AZJ8	Lactococcus_phage	79.9	6.2e-87
WP_011677061.1|2124811_2125006_+	hypothetical protein	NA	Q9AZK1	Lactococcus_phage	96.9	3.9e-28
WP_031286289.1|2125292_2125550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011677063.1|2125665_2126976_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_011677065.1|2127624_2128806_+|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	45.2	4.9e-89
WP_011677066.1|2129018_2129645_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_011677067.1|2129677_2130697_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011677068.1|2130689_2131460_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.8	4.9e-29
WP_011677069.1|2131478_2133257_-	glycerophosphodiester phosphodiesterase	NA	A0A076G4Q2	Staphylococcus_phage	27.0	2.0e-09
WP_011677070.1|2133555_2133954_+	HIT family protein	NA	NA	NA	NA	NA
WP_011677071.1|2133968_2134190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014573252.1|2134201_2134546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011677073.1|2134623_2135313_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_011677074.1|2135699_2136125_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_011677075.1|2136260_2137025_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011677076.1|2137024_2137903_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	26.4	8.6e-06
WP_011677077.1|2137969_2138179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011677078.1|2138212_2138734_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_011677079.1|2138908_2139766_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011677080.1|2139810_2140269_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011677081.1|2140353_2140911_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_004254608.1|2141066_2141783_-	UMP kinase	NA	NA	NA	NA	NA
WP_011677082.1|2141867_2142320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011677083.1|2142449_2143637_-	acetate kinase	NA	NA	NA	NA	NA
2142384:2142401	attR	AATTTTACTGACAGCTTT	NA	NA	NA	NA
WP_011677084.1|2143795_2144983_-	acetate kinase	NA	NA	NA	NA	NA
WP_011677085.1|2145174_2146113_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011677086.1|2146200_2146452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031286284.1|2146552_2148385_-	translational GTPase TypA	NA	A0A1S5SF82	Streptococcus_phage	35.4	9.2e-18
WP_152023940.1|2148704_2149717_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.1	3.6e-40
WP_011677091.1|2150662_2151553_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011677092.1|2151613_2152072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011677094.1|2153041_2153770_-	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011677095.1|2153962_2154184_+	YqgQ family protein	NA	NA	NA	NA	NA
WP_011677096.1|2154217_2155189_+	ROK family glucokinase	NA	NA	NA	NA	NA
WP_011677097.1|2155191_2155578_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_011677098.1|2155693_2156140_-	DNA starvation/stationary phase protection protein	NA	A0A2K9VCK5	Lactobacillus_phage	33.6	2.5e-17
WP_011677099.1|2156276_2156864_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_011677100.1|2156940_2157831_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011677101.1|2157900_2158995_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_011677102.1|2159069_2159561_-|tRNA	prolyl-tRNA editing protein	tRNA	NA	NA	NA	NA
WP_011677103.1|2159635_2161129_-	amino acid permease	NA	NA	NA	NA	NA
WP_011677104.1|2161318_2162449_-	aminotransferase	NA	NA	NA	NA	NA
WP_011677105.1|2162712_2163657_-	carbamate kinase	NA	NA	NA	NA	NA
WP_011677106.1|2163689_2164634_-	carbamate kinase	NA	NA	NA	NA	NA
WP_011677107.1|2164651_2166232_-	amino acid permease	NA	NA	NA	NA	NA
WP_011677108.1|2166362_2167427_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_011677109.1|2169124_2170819_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	34.2	7.8e-80
WP_004254487.1|2170886_2171345_+	arginine repressor	NA	NA	NA	NA	NA
WP_011677111.1|2171504_2172836_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_011677112.1|2173036_2173636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011677113.1|2173799_2176904_-	SNF2 helicase associated domain-containing protein	NA	A0A2L1IWL4	Gordonia_phage	30.1	2.4e-42
WP_152023941.1|2177241_2178253_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.5	7.3e-41
WP_011677116.1|2180723_2181680_-	serine hydrolase	NA	NA	NA	NA	NA
WP_011677117.1|2181752_2182532_-	VOC family protein	NA	NA	NA	NA	NA
WP_011677118.1|2182760_2182922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011675534.1|2182981_2184157_-|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	32.3	2.5e-32
>prophage 16
NC_008527	Lactococcus lactis subsp. cremoris SK11, complete sequence	2438589	2243337	2309598	2438589	transposase,protease,tRNA	uncultured_Mediterranean_phage(25.0%)	50	NA	NA
WP_152023942.1|2243337_2244731_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	44.6	2.9e-56
WP_011677177.1|2244803_2245613_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_011677178.1|2245605_2246343_-	metal ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	25.7	7.0e-17
WP_011677179.1|2246521_2247364_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011677180.1|2247360_2247798_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011677181.1|2247877_2248177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041167483.1|2248200_2248647_-	competence protein ComGF	NA	NA	NA	NA	NA
WP_011677183.1|2248609_2248906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050574401.1|2249267_2249618_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_011677100.1|2251512_2252403_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011677185.1|2252690_2257598_-	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	37.2	9.1e-20
WP_011677186.1|2257771_2258074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011677187.1|2258232_2259564_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011677188.1|2259579_2261430_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011677189.1|2261499_2262786_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_011677190.1|2262804_2263608_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_011677191.1|2263607_2264342_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	37.0	2.6e-16
WP_011677192.1|2264691_2265024_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_011677194.1|2265834_2266314_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_011677195.1|2266689_2267913_+|protease	serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	25.8	2.4e-06
WP_011677196.1|2268034_2269033_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_011677197.1|2269170_2270511_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_011677198.1|2270618_2270843_+	YkuJ family protein	NA	NA	NA	NA	NA
WP_011677199.1|2270981_2271986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014573352.1|2272042_2272795_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_011677201.1|2273002_2275636_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	31.3	3.8e-57
WP_011677202.1|2275897_2276707_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_011677203.1|2276706_2277312_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_011677205.1|2283761_2285492_-	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
WP_011677206.1|2285696_2286725_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_011677207.1|2286846_2287614_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_011677208.1|2288008_2289034_+	lactonase family protein	NA	NA	NA	NA	NA
WP_011677209.1|2289289_2292001_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_011677211.1|2292464_2292962_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_011677212.1|2292948_2293158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011675620.1|2293445_2294336_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_014573366.1|2294442_2295762_-	KxxxW cyclic peptide radical SAM maturase	NA	NA	NA	NA	NA
WP_011677213.1|2296261_2297293_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_011677214.1|2297276_2297777_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	32.1	2.0e-15
WP_031286167.1|2297824_2298364_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_011677216.1|2298534_2299755_-	MFS transporter	NA	NA	NA	NA	NA
WP_050748315.1|2301252_2301747_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_011677218.1|2301770_2302877_+	anti sigma factor C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011677219.1|2302971_2304318_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_014573374.1|2304661_2305168_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
WP_011677222.1|2305201_2305942_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011677223.1|2305987_2306791_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011677224.1|2306860_2307706_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_041167488.1|2307935_2308217_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011675534.1|2308422_2309598_+|transposase	IS256-like element IS905 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	32.3	2.5e-32
