assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000014165.1_ASM1416v1	NC_008146	Mycobacterium sp. MCS, complete genome	1	4054105-4054208	1	CRISPRCasFinder	no		WYL,cas3,csa3,casR,cas4,DEDDh,DinG	Orphan	GCGCTGAGGGCCTGGGCAAGTCTC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,csa3,casR,cas4,DEDDh,DinG,csf3gr5,csf2gr7,csf4gr11,csf1gr8	NA|237aa|up_9|NC_008146.1_4047204_4047915_-,NA|221aa|up_2|NC_008146.1_4052585_4053248_-,NA|125aa|up_1|NC_008146.1_4053271_4053646_-,NA|62aa|up_0|NC_008146.1_4053686_4053872_-,NA|105aa|down_1|NC_008146.1_4054798_4055113_-,NA|110aa|down_2|NC_008146.1_4055129_4055459_-,NA|75aa|down_4|NC_008146.1_4056815_4057040_-,NA|216aa|down_5|NC_008146.1_4057039_4057687_-,NA|73aa|down_6|NC_008146.1_4057689_4057908_-,NA|84aa|down_7|NC_008146.1_4057885_4058137_-,NA|93aa|down_8|NC_008146.1_4058221_4058500_-,NA|132aa|down_9|NC_008146.1_4058525_4058921_-	NA|237aa|up_9|NC_008146.1_4047204_4047915_-	NA	NA|192aa|up_8|NC_008146.1_4048019_4048595_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|291aa|up_7|NC_008146.1_4048596_4049469_-	COG1703, ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]	NA|384aa|up_6|NC_008146.1_4049481_4050633_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|255aa|up_5|NC_008146.1_4050711_4051476_+	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs	NA|247aa|up_4|NC_008146.1_4051472_4052213_+	PRK08278, PRK08278, SDR family oxidoreductase	NA|88aa|up_3|NC_008146.1_4052209_4052473_-	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|221aa|up_2|NC_008146.1_4052585_4053248_-	NA	NA|125aa|up_1|NC_008146.1_4053271_4053646_-	NA	NA|62aa|up_0|NC_008146.1_4053686_4053872_-	NA	NA|120aa|down_0|NC_008146.1_4054439_4054799_-	pfam01844, HNH, HNH endonuclease	NA|105aa|down_1|NC_008146.1_4054798_4055113_-	NA	NA|110aa|down_2|NC_008146.1_4055129_4055459_-	NA	NA|286aa|down_3|NC_008146.1_4055729_4056587_-	pfam05065, Phage_capsid, Phage capsid family	NA|75aa|down_4|NC_008146.1_4056815_4057040_-	NA	NA|216aa|down_5|NC_008146.1_4057039_4057687_-	NA	NA|73aa|down_6|NC_008146.1_4057689_4057908_-	NA	NA|84aa|down_7|NC_008146.1_4057885_4058137_-	NA	NA|93aa|down_8|NC_008146.1_4058221_4058500_-	NA	NA|132aa|down_9|NC_008146.1_4058525_4058921_-	NA
GCF_000014165.1_ASM1416v1	NC_008146	Mycobacterium sp. MCS, complete genome	2	4603408-4603494	2	CRISPRCasFinder	no	csa3	WYL,cas3,csa3,casR,cas4,DEDDh,DinG	Type I-A	GCATCATCCGCCGTCACCCGACCGGCG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,csa3,casR,cas4,DEDDh,DinG,csf3gr5,csf2gr7,csf4gr11,csf1gr8	NA|473aa|up_7|NC_008146.1_4593586_4595005_-,NA	NA|528aa|up_9|NC_008146.1_4591357_4592941_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|210aa|up_8|NC_008146.1_4592937_4593567_-	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|473aa|up_7|NC_008146.1_4593586_4595005_-	NA	NA|296aa|up_6|NC_008146.1_4595062_4595950_-	pfam17270, DUF5336, Family of unknown function (DUF5336)	NA|377aa|up_5|NC_008146.1_4596095_4597226_-	TIGR04021, LLM_DMSO2_sfnG, dimethyl sulfone monooxygenase SfnG	NA|283aa|up_4|NC_008146.1_4597326_4598175_+	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family	NA|510aa|up_3|NC_008146.1_4598246_4599776_-	PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated	NA|301aa|up_2|NC_008146.1_4599921_4600824_-	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|388aa|up_1|NC_008146.1_4600834_4601998_-	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|361aa|up_0|NC_008146.1_4602260_4603343_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|786aa|down_0|NC_008146.1_4603984_4606342_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|99aa|down_1|NC_008146.1_4606540_4606837_+	PRK07857, PRK07857, chorismate mutase	NA|682aa|down_2|NC_008146.1_4606889_4608935_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|483aa|down_3|NC_008146.1_4609094_4610543_-	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|555aa|down_4|NC_008146.1_4610594_4612259_+	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|250aa|down_5|NC_008146.1_4612308_4613058_-	PRK08251, PRK08251, SDR family oxidoreductase	NA|288aa|down_6|NC_008146.1_4613131_4613995_-	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|130aa|down_7|NC_008146.1_4614011_4614401_-	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|255aa|down_8|NC_008146.1_4614419_4615184_-	PRK08284, PRK08284, precorrin 6A synthase; Provisional	NA|351aa|down_9|NC_008146.1_4615211_4616264_-	pfam03631, Virul_fac_BrkB, Virulence factor BrkB
GCF_000014165.1_ASM1416v1	NC_008146	Mycobacterium sp. MCS, complete genome	3	5536988-5537088	3	CRISPRCasFinder	no	csa3	WYL,cas3,csa3,casR,cas4,DEDDh,DinG	Type I-A	GGCCACGACGGCGGGGCCGACGGCACCGC	29	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,csa3,casR,cas4,DEDDh,DinG,csf3gr5,csf2gr7,csf4gr11,csf1gr8	NA,NA|117aa|down_9|NC_008146.1_5545167_5545518_+	NA|93aa|up_9|NC_008146.1_5525745_5526024_+	pfam03861, ANTAR, ANTAR domain	NA|250aa|up_8|NC_008146.1_5526026_5526776_-	pfam13185, GAF_2, GAF domain	NA|216aa|up_7|NC_008146.1_5526791_5527439_-	smart01012, ANTAR, ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins	NA|709aa|up_6|NC_008146.1_5527873_5530000_-	pfam02538, Hydantoinase_B, Hydantoinase B/oxoprolinase	NA|196aa|up_5|NC_008146.1_5532293_5532881_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|426aa|up_4|NC_008146.1_5532846_5534124_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|164aa|up_3|NC_008146.1_5534213_5534705_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|323aa|up_2|NC_008146.1_5534708_5535677_-	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs	NA|152aa|up_1|NC_008146.1_5535739_5536195_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|173aa|up_0|NC_008146.1_5536288_5536807_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|405aa|down_0|NC_008146.1_5537101_5538316_+	pfam08007, Cupin_4, Cupin superfamily protein	NA|296aa|down_1|NC_008146.1_5538312_5539200_+	COG4759, COG4759, Uncharacterized protein conserved in bacteria containing thioredoxin-like domain [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_2|NC_008146.1_5539239_5539722_-	cd14797, DUF302, Uncharacterized domain family DUF302	NA|177aa|down_3|NC_008146.1_5539734_5540265_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|321aa|down_4|NC_008146.1_5540267_5541230_-	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs	NA|197aa|down_5|NC_008146.1_5541465_5542056_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|459aa|down_6|NC_008146.1_5542058_5543435_-	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters	NA|280aa|down_7|NC_008146.1_5543597_5544437_+	pfam02211, NHase_beta, Nitrile hydratase beta subunit	NA|221aa|down_8|NC_008146.1_5544500_5545163_+	TIGR03887, Thiocyanate_hydrolase_subunit_gamma, thiocyanate hydrolase, gamma subunit	NA|117aa|down_9|NC_008146.1_5545167_5545518_+	NA
