The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_008060	Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence	3294563	292377	305476	3294563		Hokovirus(12.5%)	11	NA	NA
WP_006476838.1|292377_294330_+	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	49.8	1.6e-148
WP_006476837.1|294586_295723_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.9	5.0e-22
WP_011544642.1|295727_297641_+	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	36.7	2.9e-54
WP_006476834.1|297763_298579_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	33.7	6.7e-37
WP_011544643.1|298622_299309_-	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	29.5	1.2e-07
WP_006476832.1|299305_299848_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_011544644.1|299883_301440_-	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	32.7	6.2e-23
WP_006476830.1|301445_302123_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_011544645.1|302134_302920_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_006476828.1|303122_304178_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.9	2.2e-72
WP_011544646.1|304276_305476_-	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NA	A0A2H4UVM2	Bodo_saltans_virus	24.3	3.4e-05
>prophage 3
NC_008060	Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence	3294563	2852939	2928290	3294563	transposase,tRNA,plate	Pseudomonas_phage(20.0%)	55	NA	NA
WP_011546547.1|2852939_2854238_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_078041952.1|2854336_2855431_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_006477064.1|2855687_2856770_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	46.6	6.7e-08
WP_011546548.1|2856777_2857620_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_006477066.1|2857687_2857999_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_006477067.1|2858022_2858619_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_011546549.1|2858821_2859613_+	dioxygenase	NA	NA	NA	NA	NA
WP_011546550.1|2861088_2862687_-	APC family permease	NA	NA	NA	NA	NA
WP_006477070.1|2863106_2863310_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	71.6	1.4e-20
WP_011546551.1|2863413_2864664_-	Hsp70 family protein	NA	NA	NA	NA	NA
WP_011546552.1|2864888_2865494_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_011546553.1|2865651_2866935_-	MFS transporter	NA	NA	NA	NA	NA
WP_011546554.1|2867154_2867775_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_006477075.1|2867852_2868425_+	DUF1415 domain-containing protein	NA	NA	NA	NA	NA
WP_011546555.1|2868464_2869355_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_041489268.1|2869444_2870578_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011546557.1|2870713_2871046_-	YegP family protein	NA	NA	NA	NA	NA
WP_011546558.1|2871201_2871696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154233672.1|2872112_2872322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011546560.1|2872339_2874508_+	peptidase M1	NA	A0A0P0IY26	Acinetobacter_phage	26.7	2.2e-50
WP_011546561.1|2874629_2875550_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011694129.1|2875713_2876691_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011694128.1|2876715_2876868_+	DUF1427 family protein	NA	NA	NA	NA	NA
WP_011546564.1|2876911_2877940_-	transporter	NA	NA	NA	NA	NA
WP_011546565.1|2878152_2879157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011546566.1|2879278_2880124_+	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_011546567.1|2880425_2884370_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_006477085.1|2884366_2885356_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_050768801.1|2885364_2886309_+	OmpA family protein	NA	NA	NA	NA	NA
WP_011546569.1|2886576_2887197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011546570.1|2887229_2888099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011546572.1|2888615_2890877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011546573.1|2890863_2891799_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_041489595.1|2891776_2891986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079999346.1|2892018_2892888_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_011546575.1|2892841_2893882_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_011546577.1|2896513_2897635_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_011694123.1|2900387_2901488_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_006477091.1|2901451_2903287_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_006477092.1|2903363_2903849_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_006477093.1|2903911_2904415_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_006477094.1|2904485_2905976_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_006484395.1|2905991_2906507_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_011546581.1|2906553_2907189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006477097.1|2907561_2908173_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_006477098.1|2908275_2909622_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_011546582.1|2909618_2910401_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_011546583.1|2910487_2910805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011546584.1|2911340_2911916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011546587.1|2916635_2919827_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.6	7.9e-57
WP_011546588.1|2920183_2920984_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011546589.1|2921093_2921297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011546591.1|2923029_2923914_-	sce7726 family protein	NA	NA	NA	NA	NA
WP_011546592.1|2924027_2925644_-	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	22.3	2.6e-24
WP_011544710.1|2927027_2928290_+|transposase	IS110-like element ISBma3 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NC_008061	Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence	2788459	2123373	2149234	2788459	integrase,transposase	Escherichia_phage(28.57%)	25	2145206:2145221	2157294:2157309
WP_011548482.1|2123373_2124390_+|transposase	IS481-like element ISBcen24 family transposase	transposase	NA	NA	NA	NA
WP_011694465.1|2124394_2124532_+|transposase	transposase	transposase	A0A1B0Z042	Pseudomonas_phage	78.4	1.9e-08
WP_011548486.1|2126454_2126724_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_011548487.1|2126720_2127209_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011548488.1|2127290_2127518_+	DUF1016 family protein	NA	NA	NA	NA	NA
WP_085962301.1|2127783_2128883_-|transposase	IS3-like element ISBcen23 family transposase	transposase	S5WIU1	Leptospira_phage	37.9	4.8e-38
WP_011546517.1|2129184_2130690_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_011546518.1|2130682_2131480_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	37.2	9.8e-33
WP_011548491.1|2131574_2132438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089446904.1|2132596_2132785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011548492.1|2132765_2133320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011548493.1|2133408_2134359_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_011548495.1|2134996_2135641_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
WP_011548496.1|2135653_2135962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011548497.1|2136730_2137894_+	arabinogalactan endo-1,4-beta-galactosidase	NA	NA	NA	NA	NA
WP_011548498.1|2137937_2139233_-	MFS transporter	NA	NA	NA	NA	NA
WP_011548499.1|2139237_2141208_-	beta-galactosidase	NA	NA	NA	NA	NA
WP_011548500.1|2141244_2142096_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_011548501.1|2142107_2143025_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_011548502.1|2143115_2144354_-	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011548503.1|2144417_2145572_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.9	3.4e-26
2145206:2145221	attL	GCAGCACGCGCGCGGC	NA	NA	NA	NA
WP_011548504.1|2145807_2146821_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.7	6.4e-13
WP_011548505.1|2147161_2147383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011694462.1|2147379_2148168_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.7	9.4e-36
WP_011694461.1|2148142_2149234_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2L1IVA1	Escherichia_phage	32.7	1.5e-12
2157294:2157309	attR	GCCGCGCGCGTGCTGC	NA	NA	NA	NA
