The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	320318	358089	4406967	transposase,integrase	Escherichia_phage(30.0%)	47	345474:345491	359765:359782
WP_049769275.1|320318_321692_+|transposase	IS701-like element ISNha2 family transposase	transposase	NA	NA	NA	NA
WP_081434927.1|321784_322216_+|transposase	IS200/IS605 family transposase	transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	43.0	2.6e-16
WP_086008300.1|323575_323890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508892.1|323886_324510_+	Maf-like protein	NA	NA	NA	NA	NA
WP_011508893.1|324499_324682_+	DNA gyrase inhibitor YacG	NA	NA	NA	NA	NA
WP_011508894.1|325062_326262_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	38.1	2.6e-69
WP_081435052.1|326377_326617_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_041357553.1|327142_327415_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043495.1|327528_328680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508896.1|328824_329229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508897.1|329221_332593_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508898.1|332706_333642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041357554.1|333658_333856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041357556.1|333870_334059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508899.1|334181_334670_+	HNH endonuclease	NA	A0A2H4PGT3	Escherichia_phage	40.4	1.9e-26
WP_011508900.1|334670_334883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011508901.1|335081_335732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043496.1|336063_336357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043497.1|336928_337783_+	hypothetical protein	NA	A0A1P8CWZ3	Bacillus_phage	37.0	1.3e-46
WP_157043498.1|337779_338535_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011508904.1|338589_338937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041357562.1|339058_339466_+	hypothetical protein	NA	A6M997	Geobacillus_virus	36.2	5.2e-14
WP_011508906.1|339510_340377_+	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	43.2	1.5e-55
WP_041357563.1|340373_340556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508907.1|340647_340911_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508908.1|340990_341329_+	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_011508909.1|341664_342351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508910.1|342347_342707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508911.1|342709_344599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508912.1|344585_344912_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011508913.1|344958_346329_+	hypothetical protein	NA	NA	NA	NA	NA
345474:345491	attL	GGTCGCCTTCAGCGGCGC	NA	NA	NA	NA
WP_011508914.1|346335_347844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508915.1|347847_349305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043499.1|349448_349748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011508916.1|349821_350184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508917.1|350186_350573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508918.1|350725_352225_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.7	3.9e-14
WP_011508919.1|352224_353088_+|transposase	transposase	transposase	A0A2L1IVB6	Escherichia_phage	30.7	1.3e-30
WP_011508920.1|353244_353643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011508921.1|353644_353869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011508922.1|353869_354598_-	hypothetical protein	NA	E7C9Q0	Salmonella_phage	38.6	3.1e-17
WP_157043500.1|354613_354787_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043501.1|354840_354978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043502.1|354970_355126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041357567.1|355698_355890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508924.1|356015_356792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011508925.1|356919_358089_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A291AUF0	Sinorhizobium_phage	48.5	2.5e-85
359765:359782	attR	GCGCCGCTGAAGGCGACC	NA	NA	NA	NA
>prophage 2
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	362134	369139	4406967	head,tail,protease,terminase,portal,capsid	Campylobacter_phage(25.0%)	8	NA	NA
WP_011508932.1|362134_362470_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_011508933.1|362466_364095_-|terminase	terminase large subunit	terminase	X2KQ40	Campylobacter_phage	26.9	9.9e-48
WP_011508934.1|364097_364511_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_041357575.1|364510_364810_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_011508936.1|365783_366170_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011508937.1|366229_367378_-|capsid	phage major capsid protein	capsid	B0VK33	Azospirillum_phage	34.2	5.2e-51
WP_011508938.1|367385_367919_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	49.4	8.0e-31
WP_011508939.1|367915_369139_-|portal	phage portal protein	portal	A4JWZ9	Burkholderia_virus	27.6	8.0e-34
>prophage 3
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	489698	502040	4406967		Staphylococcus_phage(16.67%)	9	NA	NA
WP_011509039.1|489698_491315_+	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	49.0	1.2e-141
WP_011509040.1|491569_492463_+	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	51.4	7.1e-64
WP_011509041.1|492587_493565_-	arginase	NA	A0A1V0SJM8	Klosneuvirus	35.4	5.1e-23
WP_041357608.1|493561_496276_-	DNA ligase D	NA	A0A291AUP8	Sinorhizobium_phage	38.8	9.1e-46
WP_081434929.1|496167_496530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509044.1|496542_497544_-	Ku protein	NA	NA	NA	NA	NA
WP_041357610.1|497771_498335_-	orotate phosphoribosyltransferase	NA	E3SNS3	Prochlorococcus_phage	39.4	7.7e-24
WP_011509046.1|498434_499070_-	LysE family translocator	NA	NA	NA	NA	NA
WP_157043729.1|499091_502040_-	DNA polymerase I	NA	A0A142F1Q9	Bacillus_phage	31.6	6.6e-66
>prophage 4
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	851395	893648	4406967	protease,terminase,transposase	Acidithiobacillus_phage(27.27%)	33	NA	NA
WP_011509354.1|851395_851701_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	34.7	1.9e-08
WP_041358710.1|851936_853619_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.5	3.9e-15
WP_011509356.1|854421_854745_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	43.9	3.7e-07
WP_011509357.1|856169_857414_-	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_011509358.1|857537_858293_-	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
WP_049769287.1|858518_860468_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_011509360.1|861020_861272_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_011509361.1|861342_862272_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.5	1.7e-44
WP_041358714.1|862378_863140_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_011509363.1|863169_864954_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_041358716.1|865650_866124_+	VOC family protein	NA	NA	NA	NA	NA
WP_157043737.1|866429_868145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358718.1|868330_870070_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043738.1|870318_871035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509368.1|871933_872797_-|transposase	transposase	transposase	A0A2L1IVB6	Escherichia_phage	30.7	2.2e-30
WP_011508918.1|872796_874296_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.7	3.9e-14
WP_157043532.1|875055_876675_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_041358722.1|876620_877604_-	sugar kinase	NA	NA	NA	NA	NA
WP_011509372.1|877608_878361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043739.1|878797_879661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509374.1|879660_880212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509375.1|880502_882023_-	recombinase family protein	NA	K4ICM1	Acidithiobacillus_phage	48.9	2.4e-88
WP_011509376.1|882012_882510_-	DUF2924 domain-containing protein	NA	NA	NA	NA	NA
WP_011509377.1|882506_882860_-	DUF3489 domain-containing protein	NA	K4HZZ2	Acidithiobacillus_phage	45.3	1.7e-08
WP_041357684.1|882956_883178_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358726.1|883318_883591_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011509380.1|884009_885410_-|terminase	phage terminase large subunit	terminase	A0A088FB00	Idiomarinaceae_phage	34.2	7.7e-57
WP_011509381.1|885399_885891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509382.1|885887_887198_-	DNA methylase N-4	NA	K4HZA5	Acidithiobacillus_phage	39.9	1.7e-66
WP_011509383.1|887941_889441_-	catalase	NA	A0A2K9L572	Tupanvirus	44.4	3.0e-91
WP_081434943.1|889591_889990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509385.1|891240_892269_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011509386.1|892535_893648_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	901768	965300	4406967	tail,integrase,transposase,plate	Bacillus_phage(33.33%)	46	918301:918316	957717:957732
WP_011509396.1|901768_904861_-|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
WP_041357689.1|904857_907710_-|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
WP_041358737.1|907706_908054_-	GPW/gp25 family protein	NA	NA	NA	NA	NA
WP_041357691.1|908074_908410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358740.1|908423_908948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509399.1|909044_910160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043740.1|910163_910442_-	LysM domain-containing protein	NA	NA	NA	NA	NA
WP_011509401.1|910522_911179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509402.1|911175_913905_-	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_011509403.1|913901_916592_-	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_041357693.1|916588_916879_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509404.1|916875_918969_-	AAA family ATPase	NA	A0A2D2W2A9	Stenotrophomonas_phage	31.3	5.2e-09
918301:918316	attL	CAGCGCCTCCTGCGAA	NA	NA	NA	NA
WP_011509405.1|918965_920285_-	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
WP_011509406.1|920281_921019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509407.1|921015_921729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509408.1|921740_922265_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_011509409.1|922280_924215_-|tail	phage tail sheath family protein	tail	J9PVC2	Bacillus_phage	30.5	5.7e-34
WP_011509410.1|925123_926155_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011509412.1|926997_931308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509413.1|934125_934479_-	DUF3489 domain-containing protein	NA	K4HZZ2	Acidithiobacillus_phage	43.2	7.0e-07
WP_041357696.1|934577_934799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509414.1|936316_936808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509383.1|938869_940369_-	catalase	NA	A0A2K9L572	Tupanvirus	44.4	3.0e-91
WP_081434943.1|940519_940918_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509415.1|940936_942490_-	phospholipase D family protein	NA	NA	NA	NA	NA
WP_011509416.1|942660_943539_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_011509417.1|944091_944961_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011509418.1|945355_945817_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_011509420.1|946218_947181_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011509422.1|947591_948035_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_011509423.1|948227_949223_-	catalase family peroxidase	NA	NA	NA	NA	NA
WP_081434944.1|949499_949892_-|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	36.7	3.5e-07
WP_049769413.1|949974_950364_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011509425.1|951000_951870_-|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	31.5	6.5e-30
WP_157043533.1|952179_952623_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_081434945.1|953374_953776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509427.1|954229_954751_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011509428.1|954910_955993_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_011509429.1|956070_958299_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
957717:957732	attR	TTCGCAGGAGGCGCTG	NA	NA	NA	NA
WP_041358749.1|958337_959300_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_011509431.1|959305_960520_+	acetate kinase	NA	NA	NA	NA	NA
WP_011509432.1|960516_961305_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_011509433.1|961411_962062_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_011509434.1|962065_962713_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_011509435.1|963265_963949_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_081434946.1|964220_965300_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	1097062	1154009	4406967	tail,protease,transposase	Bradyrhizobium_phage(28.57%)	39	NA	NA
WP_081434955.1|1097062_1097311_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011509538.1|1097668_1098817_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011509539.1|1098820_1101967_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_011509541.1|1102381_1104784_-	glucan 1,4-alpha-glucosidase	NA	NA	NA	NA	NA
WP_011509542.1|1106054_1107410_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_041358790.1|1108155_1109490_-	two-component sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	33.1	1.1e-07
WP_011509544.1|1109465_1110128_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011509545.1|1110458_1111241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358792.1|1111371_1112067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509566.1|1112206_1112392_-	hypothetical protein	NA	A0A1X9SH55	Bradyrhizobium_phage	64.3	1.2e-10
WP_011509548.1|1112648_1117112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509549.1|1119343_1120213_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	A0A127AWE5	Bacillus_phage	29.8	9.7e-18
WP_011509550.1|1120382_1120742_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_011509551.1|1120738_1121017_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_011509552.1|1121013_1121502_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_011509553.1|1121498_1123106_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_011509554.1|1123102_1123447_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_011509555.1|1123446_1126383_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_041357725.1|1126505_1126730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081434957.1|1126760_1128146_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_081434958.1|1127929_1131409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509556.1|1131723_1132254_+|tail	phage tail protein	tail	A0A2R4A082	Microbacterium_phage	37.0	8.0e-15
WP_011509557.1|1132288_1132819_+|tail	phage tail protein	tail	E3T4R8	Cafeteria_roenbergensis_virus	31.2	1.5e-13
WP_011509558.1|1132863_1133406_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_011509559.1|1133392_1133980_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011509560.1|1133972_1134266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509561.1|1134580_1136731_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_157043746.1|1136714_1138718_+	tyrosinase family protein	NA	NA	NA	NA	NA
WP_011509563.1|1138757_1141403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509564.1|1141405_1141822_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509565.1|1141802_1142981_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_011509566.1|1143009_1143195_-	hypothetical protein	NA	A0A1X9SH55	Bradyrhizobium_phage	64.3	1.2e-10
WP_011509567.1|1144019_1144517_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_011509568.1|1144513_1145722_-	exo-alpha-sialidase	NA	NA	NA	NA	NA
WP_011509569.1|1145738_1148114_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011509571.1|1148812_1149976_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_081434959.1|1150326_1151913_+	CYTH and CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_011509574.1|1151998_1152955_-|protease	trypsin-like serine protease	protease	A0A1B1IRH0	uncultured_Mediterranean_phage	32.7	2.5e-14
WP_011509575.1|1153136_1154009_+|protease	serine protease	protease	NA	NA	NA	NA
>prophage 7
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	1183744	1191313	4406967		Enterobacteria_phage(33.33%)	7	NA	NA
WP_011509599.1|1183744_1184668_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	28.6	2.6e-08
WP_011509600.1|1184941_1186192_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_011509601.1|1186396_1187698_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	40.6	6.7e-79
WP_011509602.1|1187770_1188838_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	50.0	4.9e-88
WP_011509603.1|1188863_1189739_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	60.2	1.7e-94
WP_011509604.1|1189844_1190399_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	52.2	1.5e-48
WP_011509605.1|1190398_1191313_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	32.6	9.2e-27
>prophage 8
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	1546624	1611844	4406967	head,tail,transposase,protease,portal,capsid	Paracoccus_phage(25.0%)	61	NA	NA
WP_011509880.1|1546624_1548973_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011509881.1|1548990_1550058_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_011509882.1|1550061_1552407_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011509883.1|1552439_1553378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509885.1|1553859_1555236_-	thiamine biosynthesis protein ThiF	NA	NA	NA	NA	NA
WP_011509886.1|1555232_1556342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509887.1|1556478_1557057_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509888.1|1557053_1557476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509889.1|1557472_1558282_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_011509890.1|1558505_1560380_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011509891.1|1560636_1560921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011504826.1|1562497_1563733_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011509894.1|1565397_1566156_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_011509895.1|1566161_1567283_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_011509896.1|1567390_1568179_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_011509897.1|1568191_1568959_-	flagellar basal-body rod protein FlgF	NA	NA	NA	NA	NA
WP_041358861.1|1569326_1569821_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_011509899.1|1569833_1571039_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_011509900.1|1571035_1571470_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509901.1|1571466_1572267_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509902.1|1572365_1576175_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011509903.1|1576210_1576966_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_011509904.1|1576962_1577901_-	flagellar biosynthesis protein FliO	NA	NA	NA	NA	NA
WP_011509905.1|1578259_1578667_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_011509906.1|1578696_1579122_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_011509907.1|1579136_1579448_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_011509908.1|1579592_1579856_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_011509909.1|1580048_1580819_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA	NA
WP_011509910.1|1580832_1581912_+	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_011509911.1|1582067_1584629_+	response regulator	NA	NA	NA	NA	NA
WP_011509912.1|1584726_1585689_-	DUF2336 domain-containing protein	NA	NA	NA	NA	NA
WP_041357814.1|1585828_1586032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509913.1|1586161_1586932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509914.1|1587100_1587679_-	membrane protein	NA	NA	NA	NA	NA
WP_011509915.1|1587675_1588254_-	DUF1214 domain-containing protein	NA	NA	NA	NA	NA
WP_011509916.1|1588508_1590791_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_011509917.1|1591111_1591627_+	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
WP_011509918.1|1591911_1593471_+	MFS transporter	NA	NA	NA	NA	NA
WP_011509919.1|1593620_1593785_+	Flp family type IVb pilin	NA	NA	NA	NA	NA
WP_157043553.1|1593910_1594405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081435058.1|1594393_1594843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509921.1|1594835_1596104_+	DNA-packaging protein	NA	A0A0U4IJ26	Arthrobacter_phage	40.7	2.3e-76
WP_011509922.1|1596276_1596564_-	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_011509923.1|1596647_1597823_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	40.1	4.3e-77
WP_011509924.1|1597891_1598104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509925.1|1598103_1598292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509926.1|1598381_1599029_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	49.3	5.7e-31
WP_041358867.1|1599071_1599359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011509928.1|1599480_1600734_+|capsid	phage major capsid protein	capsid	A0A141GEW2	Brucella_phage	41.8	1.7e-79
WP_011509929.1|1600911_1601673_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_011509930.1|1601738_1602308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011509931.1|1602333_1602744_+	DUF3168 domain-containing protein	NA	I3UM06	Rhodobacter_phage	43.2	8.9e-14
WP_011509932.1|1602758_1603166_+|tail	phage major tail protein, TP901-1 family	tail	A0A1Q1PW44	Pseudoalteromonas_phage	30.0	1.2e-05
WP_011509933.1|1603312_1603633_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_011509934.1|1603629_1603842_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_011509935.1|1603834_1604419_+|tail	phage tail tape measure protein	tail	C0LP53	Escherichia_virus	31.4	2.8e-05
WP_011509936.1|1604558_1605200_+	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	49.5	4.3e-47
WP_011509937.1|1605196_1606093_+	DUF2163 domain-containing protein	NA	A0A0K0PVK1	Roseobacter_phage	44.5	4.4e-66
WP_011509938.1|1606106_1606553_+	peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	51.5	1.2e-35
WP_011509939.1|1606552_1610407_+	hypothetical protein	NA	A0A0B5A7K5	Paracoccus_phage	41.4	4.2e-238
WP_011509940.1|1610413_1611844_+	DUF2793 domain-containing protein	NA	A0A218M356	Acidovorax_phage	38.5	7.9e-33
>prophage 9
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	1775220	1830870	4406967	tRNA,protease,head,transposase	Bacillus_phage(20.0%)	48	NA	NA
WP_011510079.1|1775220_1776627_+|protease	DegQ family serine endoprotease	protease	W5SAB9	Pithovirus	33.7	2.1e-09
WP_011510080.1|1776623_1777964_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	39.9	2.9e-77
WP_157043560.1|1777960_1778659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510082.1|1778751_1779987_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_011510083.1|1780052_1780835_+	ATPase	NA	NA	NA	NA	NA
WP_011510084.1|1780884_1782582_+	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_011510085.1|1782578_1782848_+	type III secretion protein	NA	NA	NA	NA	NA
WP_041357845.1|1782971_1784504_+	acyl-CoA carboxylase subunit beta	NA	NA	NA	NA	NA
WP_041358874.1|1784614_1784956_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_011510088.1|1785194_1786661_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_049769313.1|1786657_1787173_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_011510090.1|1787253_1787793_+	ubiquinol-cytochrome c chaperone	NA	NA	NA	NA	NA
WP_041358876.1|1787804_1788401_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_011510092.1|1788673_1789738_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_011510093.1|1789734_1790712_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_011510094.1|1790843_1791176_+	integration host factor subunit alpha	NA	A0A1P8CWT5	Bacillus_phage	34.8	3.1e-09
WP_011510095.1|1791321_1791909_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011510096.1|1792753_1793350_+	DUF4337 domain-containing protein	NA	NA	NA	NA	NA
WP_157043561.1|1793535_1793829_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011510097.1|1794322_1794760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041357846.1|1795831_1796359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043562.1|1796938_1797484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086008345.1|1797836_1798591_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	34.7	2.9e-10
WP_011510102.1|1798667_1799561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043563.1|1799577_1799889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510104.1|1799863_1800547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510108.1|1802146_1802503_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510110.1|1805353_1807402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510111.1|1807408_1808305_-|head	head protein	head	M4SRT6	Rhodobacter_phage	52.5	1.3e-86
WP_011510112.1|1808301_1809288_-	Mu-like prophage I protein	NA	M4SNT6	Rhodobacter_phage	41.0	4.9e-26
WP_011510113.1|1809287_1809653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043564.1|1809928_1810324_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510115.1|1810334_1810679_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510116.1|1810675_1811395_-	ATP-binding protein	NA	A0A2D1GNS0	Pseudomonas_phage	22.4	4.6e-05
WP_011510117.1|1811397_1813401_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358879.1|1813397_1813616_-	phage-related DNA-binding protein	NA	NA	NA	NA	NA
WP_011510119.1|1813672_1814197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510120.1|1814586_1815675_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	64.0	3.9e-117
WP_011510122.1|1816213_1819090_-	aminomethyl-transferring glycine dehydrogenase	NA	M4QFZ1	Prochlorococcus_phage	51.5	1.3e-255
WP_011510123.1|1819163_1819529_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_011510124.1|1819538_1820702_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_041357852.1|1821196_1823872_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.3	2.9e-81
WP_011510126.1|1823903_1824302_-	VOC family protein	NA	NA	NA	NA	NA
WP_011510127.1|1824371_1825589_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_011510128.1|1825901_1827134_+	TrmJ/YjtD family RNA methyltransferase	NA	NA	NA	NA	NA
WP_011510129.1|1827419_1827905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510130.1|1828209_1829553_+|transposase	IS1380-like element ISNha3 family transposase	transposase	NA	NA	NA	NA
WP_081434946.1|1829790_1830870_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	1866966	1924658	4406967	head,tail,protease,terminase,portal,capsid,tRNA	Tupanvirus(18.18%)	55	NA	NA
WP_011510168.1|1866966_1869012_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.9	6.1e-119
WP_011510169.1|1869167_1869632_-	copper uptake system-associated protein	NA	NA	NA	NA	NA
WP_011510170.1|1869730_1870096_+	ArsC family reductase	NA	NA	NA	NA	NA
WP_011510171.1|1870441_1871197_+	ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	25.8	1.1e-06
WP_086008346.1|1871204_1871945_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.2	1.1e-14
WP_011510173.1|1872110_1873340_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_041358888.1|1873436_1874300_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_011510175.1|1874301_1875273_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_041358889.1|1875428_1876073_+	DUF47 domain-containing protein	NA	NA	NA	NA	NA
WP_011510177.1|1876087_1877092_+	inorganic phosphate transporter	NA	NA	NA	NA	NA
WP_011510178.1|1877084_1877399_-	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA	NA
WP_011510179.1|1877622_1879242_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	35.8	2.3e-12
WP_011510180.1|1879295_1879601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510181.1|1879771_1880356_+	NnrU family protein	NA	NA	NA	NA	NA
WP_011510182.1|1880357_1881185_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA	NA
WP_011510183.1|1881338_1881992_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011510184.1|1882032_1882572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510185.1|1882641_1884024_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_157043566.1|1884088_1884256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510186.1|1884381_1885125_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_011510187.1|1885385_1886108_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_011510188.1|1886169_1886769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510191.1|1889846_1893353_+	DNA polymerase III subunit alpha	NA	R4TPF1	Streptomyces_phage	37.6	5.2e-187
WP_011510192.1|1893533_1894532_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_011510193.1|1894659_1895583_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_011510194.1|1895635_1896352_+	UMP kinase	NA	NA	NA	NA	NA
WP_041357857.1|1896413_1896977_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_011510196.1|1896996_1897755_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	38.0	8.5e-18
WP_011510197.1|1897760_1898603_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_011510198.1|1898606_1899830_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_011510199.1|1899876_1901028_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_011510200.1|1901342_1903874_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_011510201.1|1903906_1904992_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_011510202.1|1904995_1905451_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_011510203.1|1905450_1906257_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_011510204.1|1906276_1907134_+	LpxI family protein	NA	NA	NA	NA	NA
WP_011510205.1|1907133_1908324_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_011510206.1|1908385_1909687_-	citrate (Si)-synthase	NA	NA	NA	NA	NA
WP_041357859.1|1909831_1911256_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011510208.1|1911460_1913137_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	56.6	1.3e-180
WP_011510210.1|1914644_1915949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086008347.1|1916061_1916421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041357860.1|1916417_1916612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043567.1|1917124_1917715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510212.1|1917971_1918844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510213.1|1918854_1919265_+	hypothetical protein	NA	B4UTP8	Rhizobium_phage	55.4	1.4e-27
WP_041357865.1|1919271_1919511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041357866.1|1919510_1919711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510215.1|1919710_1920931_+|portal	phage portal protein	portal	A4JWZ9	Burkholderia_virus	27.6	5.2e-33
WP_011510216.1|1920927_1921458_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0R6PIB4	Moraxella_phage	49.0	2.8e-28
WP_011510217.1|1921474_1922629_+|capsid	phage major capsid protein	capsid	B0VK33	Azospirillum_phage	35.6	4.4e-50
WP_011510218.1|1922687_1923074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043568.1|1923409_1923550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510221.1|1923942_1924245_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_011510222.1|1924241_1924658_+|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
>prophage 11
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	1962895	1975636	4406967	tRNA	uncultured_Mediterranean_phage(77.78%)	14	NA	NA
WP_011510256.1|1962895_1963921_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	43.5	1.8e-23
WP_011510257.1|1963917_1964757_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	33.3	2.6e-28
WP_086008311.1|1964757_1965525_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	49.7	1.3e-42
WP_011510259.1|1965588_1966212_-	MarC family protein	NA	NA	NA	NA	NA
WP_011510260.1|1966361_1969103_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.2	9.0e-102
WP_011510261.1|1969316_1969571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510262.1|1969898_1970396_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	35.4	2.0e-23
WP_011510263.1|1970428_1970989_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	47.9	5.6e-35
WP_011510264.1|1970998_1971427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041357874.1|1971402_1971867_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.8	4.7e-35
WP_041357875.1|1971977_1973060_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_011510267.1|1973056_1974190_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	48.7	3.5e-92
WP_011510268.1|1974217_1974436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510269.1|1974658_1975636_+	cysteine synthase A	NA	C3U2M1	Lactococcus_phage	50.0	7.0e-73
>prophage 12
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	1989875	1997075	4406967	tRNA	uncultured_Mediterranean_phage(83.33%)	8	NA	NA
WP_011510284.1|1989875_1990115_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	61.4	5.6e-08
WP_011510285.1|1990297_1990834_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_011510286.1|1990830_1991679_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	50.6	7.0e-53
WP_011510287.1|1991864_1993277_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	49.8	5.5e-95
WP_011510288.1|1993393_1994161_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	38.3	3.1e-36
WP_011510289.1|1994252_1994633_-	response regulator	NA	NA	NA	NA	NA
WP_011510290.1|1994915_1995569_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.3	2.3e-27
WP_011510291.1|1995725_1997075_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	42.7	2.8e-19
>prophage 14
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	2353143	2391146	4406967	head,transposase,integrase,portal,capsid,tRNA	Synechococcus_phage(20.0%)	41	2350053:2350069	2399884:2399900
2350053:2350069	attL	AGCGTTTTCGAGCGAAG	NA	NA	NA	NA
WP_011510587.1|2353143_2354916_-|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_041358930.1|2355138_2356287_+	ribonuclease D	NA	NA	NA	NA	NA
WP_011510589.1|2356388_2357048_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_011510590.1|2357202_2358714_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_041358932.1|2358721_2360923_-	RNA degradosome polyphosphate kinase	NA	NA	NA	NA	NA
WP_011510592.1|2361062_2361743_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_011510593.1|2361794_2362337_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_011510594.1|2362509_2363580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	42.5	6.1e-62
WP_011510595.1|2363590_2364241_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.4	1.2e-20
WP_011510596.1|2364334_2364538_-	cold-shock protein	NA	A0A218MMZ6	uncultured_virus	50.0	1.6e-11
WP_011510597.1|2364897_2365719_-	YjbE family putative metal transport protein	NA	W8EBD0	Pseudomonas_phage	45.9	1.2e-28
WP_011510598.1|2365905_2366328_-	nucleoside-diphosphate kinase	NA	M1PH31	Moumouvirus	35.6	2.5e-11
WP_011510599.1|2366626_2366974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510600.1|2367132_2369133_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_041357977.1|2369135_2370740_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	66.7	8.6e-20
WP_011510602.1|2371053_2371362_-	ETC complex I subunit	NA	NA	NA	NA	NA
WP_011510603.1|2371567_2373379_-	carbamoyltransferase	NA	E3SL71	Synechococcus_phage	32.0	7.4e-68
WP_157043597.1|2373489_2373837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358933.1|2373868_2374180_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510605.1|2374498_2374918_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_049769328.1|2375229_2376963_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_011510607.1|2376965_2377505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510608.1|2377532_2377967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043598.1|2377948_2378104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510609.1|2378522_2378849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510610.1|2378876_2379224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086008349.1|2379338_2380093_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	33.7	8.5e-10
WP_041357982.1|2380403_2380907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043599.1|2381373_2382117_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_081434984.1|2382085_2382358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086008350.1|2382963_2383380_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_041357985.1|2383623_2384292_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	38.6	1.3e-06
WP_011510618.1|2384967_2385321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510619.1|2385505_2385955_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_157043600.1|2386295_2386547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043601.1|2386981_2387149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510621.1|2387380_2387587_-	cold shock domain-containing protein	NA	A0A1W6JNX5	Morganella_phage	36.9	6.5e-05
WP_011510622.1|2387586_2388660_-|portal	phage portal protein	portal	NA	NA	NA	NA
WP_011510623.1|2388659_2389190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510624.1|2389191_2389893_-|head	peptidase U35, phage prohead HK97	head	NA	NA	NA	NA
WP_041357991.1|2389892_2391146_-|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
2399884:2399900	attR	CTTCGCTCGAAAACGCT	NA	NA	NA	NA
>prophage 15
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	2592661	2687595	4406967	head,plate,tail,transposase,protease,terminase,portal,capsid,tRNA	Aurantimonas_phage(10.34%)	98	NA	NA
WP_011510800.1|2592661_2593918_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	35.4	1.3e-55
WP_157043771.1|2594016_2597664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510802.1|2597957_2598593_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_011510803.1|2598692_2600060_+	peptidoglycan DD-metalloendopeptidase family protein	NA	S5M424	Bacillus_phage	43.2	3.5e-22
WP_157043609.1|2600256_2600436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510804.1|2600574_2602452_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	32.1	2.2e-67
WP_011510805.1|2602592_2603141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510806.1|2603298_2603754_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_011510807.1|2603750_2605253_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.4	6.6e-46
WP_011510808.1|2605624_2606794_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_011510809.1|2606790_2607888_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_086008319.1|2607821_2610383_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_011510811.1|2610486_2611446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510812.1|2611561_2612569_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_011510813.1|2612565_2613429_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_011510814.1|2613442_2614501_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_041358966.1|2614763_2615726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510816.1|2615734_2616394_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	31.8	1.3e-11
WP_011510817.1|2616397_2617285_-	YicC family protein	NA	NA	NA	NA	NA
WP_011510818.1|2617681_2618932_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_011510819.1|2619060_2620326_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_006610957.1|2620420_2620660_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_011510820.1|2620933_2621671_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA	NA
WP_011510821.1|2621690_2622650_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_011510822.1|2623034_2623478_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_011510823.1|2623483_2623723_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_011510824.1|2624162_2624510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081434992.1|2624586_2624913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043610.1|2625231_2625510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510826.1|2625776_2626073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510827.1|2626109_2627054_-	hypothetical protein	NA	A0A1R3Y6Z6	Salmonella_virus	44.0	8.0e-66
WP_011510828.1|2627581_2628025_+	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_011510829.1|2628924_2629452_-	HNH endonuclease	NA	A0A0N9RV98	Escherichia_phage	43.4	1.5e-26
WP_157043772.1|2629667_2630027_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510831.1|2630406_2630637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043611.1|2630636_2630822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510832.1|2630838_2631279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510833.1|2631278_2631716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510834.1|2631715_2632486_-	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_011510835.1|2632688_2633726_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_081434993.1|2633910_2636247_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_011510837.1|2636206_2637253_-	FkbM family methyltransferase	NA	A0A291AUV0	Sinorhizobium_phage	26.2	4.5e-09
WP_011510838.1|2637478_2638549_-	late control protein D	NA	R4JDM6	Burkholderia_phage	22.0	6.8e-21
WP_011510839.1|2638552_2638765_-|tail	tail protein X	tail	NA	NA	NA	NA
WP_011510840.1|2638771_2639197_-|tail	phage tail protein	tail	Q9ZXJ9	Pseudomonas_virus	31.7	3.6e-10
WP_041358045.1|2639196_2641218_-|tail	phage tail tape measure protein	tail	D5LGY4	Escherichia_phage	26.4	2.1e-55
WP_041358046.1|2641196_2641445_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510841.1|2641445_2641685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510842.1|2641702_2641996_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_011510843.1|2642005_2642521_-|tail	phage major tail tube protein	tail	R4JEU1	Burkholderia_phage	31.6	4.6e-15
WP_011510844.1|2642580_2644017_-|tail	tail protein	tail	V5YTI0	Pseudomonas_phage	38.7	1.5e-63
WP_011510845.1|2644059_2644596_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_011510846.1|2644592_2646365_-	DUF2793 domain-containing protein	NA	R9U0V1	Rhizobium_phage	40.1	1.6e-62
WP_011510847.1|2646365_2647028_-|tail	phage tail protein I	tail	A0A0M4R4W9	Salmonella_phage	38.0	1.4e-21
WP_011510848.1|2647024_2648074_-|plate	baseplate J protein	plate	V5YTH6	Pseudomonas_phage	32.7	1.8e-26
WP_157043612.1|2648070_2648598_-|plate	baseplate assembly protein	plate	K4I3Z7	Acidithiobacillus_phage	52.0	3.7e-20
WP_011510850.1|2648656_2649181_-|plate	baseplate assembly protein	plate	NA	NA	NA	NA
WP_011510851.1|2649184_2649970_-	hypothetical protein	NA	A0A0A8IKZ7	Aurantimonas_phage	42.2	6.5e-45
WP_011510852.1|2649969_2650350_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510853.1|2650401_2651433_-|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	37.3	6.5e-53
WP_011510854.1|2651518_2652172_-|head	head decoration protein	head	NA	NA	NA	NA
WP_011510855.1|2652186_2653242_-|protease	Clp protease ClpP	protease	R9TQF0	Rhizobium_phage	46.2	2.9e-64
WP_041358049.1|2653257_2653494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510857.1|2653493_2655110_-|portal	phage portal protein	portal	A0A0A8IK73	Aurantimonas_phage	45.7	2.8e-119
WP_041358051.1|2655106_2656900_-|terminase	phage terminase large subunit family protein	terminase	Q8H9P3	Vibrio_phage	33.4	6.6e-85
WP_011510859.1|2656817_2657366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510860.1|2657595_2658171_-	hypothetical protein	NA	A0A0A8IL87	Aurantimonas_phage	40.2	1.8e-28
WP_011510861.1|2658224_2658425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510863.1|2659583_2660006_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510864.1|2660002_2660593_-	NusG antitermination factor	NA	NA	NA	NA	NA
WP_011510865.1|2660614_2660950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043613.1|2660946_2661141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358055.1|2661137_2661419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510866.1|2661415_2662549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043614.1|2662545_2663277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043615.1|2663188_2664202_-	hypothetical protein	NA	A0A0D4DBT2	Acinetobacter_phage	48.1	5.8e-38
WP_157043616.1|2664198_2664405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043617.1|2664401_2664989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510871.1|2665559_2666222_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_041357530.1|2666769_2667285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508810.1|2668009_2668471_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510872.1|2668959_2669724_+	hypothetical protein	NA	G0ZND1	Cronobacter_phage	46.2	5.9e-35
WP_011510873.1|2669720_2670050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358062.1|2670039_2670261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510874.1|2670287_2671010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510875.1|2671012_2671603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081434995.1|2672131_2673097_+	hypothetical protein	NA	A0A240F4W2	Ochrobactrum_phage	32.9	9.4e-30
WP_011510877.1|2673809_2674796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510878.1|2674838_2675447_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_011510879.1|2675689_2678089_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	43.7	4.5e-174
WP_041358064.1|2678348_2678681_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	39.8	3.0e-12
WP_011510881.1|2679164_2680616_+	pilus assembly protein	NA	NA	NA	NA	NA
WP_011510882.1|2680692_2681031_-	phasin family protein	NA	NA	NA	NA	NA
WP_011510883.1|2681398_2683159_+	peptidase M15	NA	B6DZZ7	Stx2-converting_phage	34.7	2.5e-28
WP_041358066.1|2683373_2684093_-	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_041358068.1|2684187_2684964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510886.1|2685277_2686129_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_011510130.1|2686251_2687595_+|transposase	IS1380-like element ISNha3 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	2708465	2750161	4406967	head,tail,transposase,integrase,protease,terminase,portal,capsid,tRNA	Pandoravirus(12.5%)	50	2714553:2714575	2755308:2755330
WP_081434946.1|2708465_2709545_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011510908.1|2709724_2710192_+	RidA family protein	NA	NA	NA	NA	NA
WP_011510909.1|2710197_2710950_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_041358074.1|2711093_2712350_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_011510911.1|2712382_2712811_+	HIT family protein	NA	NA	NA	NA	NA
WP_011510912.1|2712815_2713307_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_157043618.1|2713533_2714538_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
2714553:2714575	attL	AGACTTCTTCAACAGCCTGCTAG	NA	NA	NA	NA
WP_011510914.1|2714712_2715189_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_011510915.1|2715191_2715656_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_011510916.1|2715807_2716236_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_011510917.1|2716433_2717018_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_011510918.1|2717274_2718552_+	O-acetylhomoserine aminocarboxypropyltransferase	NA	A0A0B5JD48	Pandoravirus	26.9	5.4e-17
WP_011510919.1|2718742_2719972_-	NarK/NasA family nitrate transporter	NA	NA	NA	NA	NA
WP_041358076.1|2720270_2721353_-	heme A synthase	NA	NA	NA	NA	NA
WP_011510921.1|2721449_2721656_+	DUF2842 domain-containing protein	NA	NA	NA	NA	NA
WP_011510922.1|2721832_2723026_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011510923.1|2723050_2725192_-	LPS biosynthesis protein	NA	NA	NA	NA	NA
WP_011510924.1|2725541_2726249_+	polysaccharide export protein	NA	NA	NA	NA	NA
WP_011510925.1|2726252_2727386_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_011510926.1|2727509_2729042_+	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA	NA
WP_011510927.1|2729076_2730342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510928.1|2730357_2731536_-	saccharopine dehydrogenase	NA	NA	NA	NA	NA
WP_041358079.1|2731804_2732038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358080.1|2732261_2732519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510930.1|2732870_2734565_+|integrase	tyrosine-type recombinase/integrase	integrase	A4ZR98	Synechococcus_virus	27.6	1.7e-05
WP_081434996.1|2734578_2734776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043619.1|2735040_2735238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043620.1|2735852_2736002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011510933.1|2736006_2736246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510934.1|2736356_2736662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510935.1|2736860_2737196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358089.1|2737199_2737394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510936.1|2737657_2737903_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510937.1|2738822_2741021_-	hypothetical protein	NA	A0A1P8VVI0	Erythrobacter_phage	27.4	4.2e-09
WP_011510938.1|2741017_2741359_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_041358091.1|2741355_2741769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043621.1|2741756_2743400_-|terminase	terminase large subunit	terminase	A0A0K1Y5T8	Streptomyces_phage	31.1	6.3e-50
WP_011510941.1|2743365_2743758_-|terminase	phage terminase small subunit P27 family	terminase	A0A0M7REI3	Lactobacillus_phage	26.4	1.5e-05
WP_081434997.1|2743754_2744120_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_011510943.1|2744068_2744482_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_011510944.1|2744481_2744763_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0R6PE96	Moraxella_phage	43.2	3.8e-08
WP_041358095.1|2744759_2744978_-	DUF2158 domain-containing protein	NA	NA	NA	NA	NA
WP_041358097.1|2744990_2745386_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510947.1|2745762_2746341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510948.1|2746354_2746741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011510949.1|2746803_2747976_-|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	30.0	1.7e-36
WP_041358985.1|2747977_2748472_-|head,protease	HK97 family phage prohead protease	head,protease	NA	NA	NA	NA
WP_081434998.1|2748471_2748654_-	DUF2158 domain-containing protein	NA	NA	NA	NA	NA
WP_011510951.1|2748650_2748977_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_011510952.1|2748973_2750161_-|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	35.4	5.9e-50
2755308:2755330	attR	CTAGCAGGCTGTTGAAGAAGTCT	NA	NA	NA	NA
>prophage 17
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	3001610	3073141	4406967	tRNA,protease,transposase	Bacillus_phage(14.29%)	61	NA	NA
WP_011511168.1|3001610_3002564_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_041358162.1|3002562_3003456_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_011511170.1|3003599_3005093_-	Do family serine endopeptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	27.9	4.3e-21
WP_011511171.1|3005371_3005572_-	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_011511172.1|3005608_3006508_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_011511173.1|3006504_3007662_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_011511174.1|3007821_3008358_-	dihydrofolate reductase	NA	A0A0A0PL85	Bacillus_phage	41.7	1.1e-22
WP_011511175.1|3008354_3009149_-	thymidylate synthase	NA	A0A2R4A1R4	Microbacterium_phage	65.1	1.5e-102
WP_041359016.1|3009914_3010448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511177.1|3010538_3011954_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_041359017.1|3012175_3012364_+	DUF4169 family protein	NA	NA	NA	NA	NA
WP_011511179.1|3012360_3012615_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_041358164.1|3012927_3013260_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011511181.1|3013365_3017193_-	AsmA family protein	NA	NA	NA	NA	NA
WP_011511182.1|3017460_3017976_+	thioesterase	NA	NA	NA	NA	NA
WP_011511183.1|3017982_3018156_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_011511184.1|3018431_3020933_+	AAA family ATPase	NA	A7KV33	Bacillus_phage	36.7	5.3e-109
WP_011511185.1|3021051_3021972_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.2	4.8e-23
WP_011511186.1|3021973_3022735_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_157043632.1|3022951_3023329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511188.1|3023539_3024349_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_011511189.1|3024512_3026120_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011511190.1|3026905_3027178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511191.1|3027218_3028115_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_011511192.1|3028226_3030119_+	aminopeptidase P family protein	NA	A0A0P0I8D7	Acinetobacter_phage	32.0	5.7e-79
WP_011511193.1|3030151_3031087_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011511194.1|3031891_3032611_-	DUF899 domain-containing protein	NA	NA	NA	NA	NA
WP_011511195.1|3032914_3033124_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	53.1	1.5e-09
WP_157043633.1|3033281_3033620_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511197.1|3033843_3035280_-	adenosylhomocysteinase	NA	S4W1G4	Pandoravirus	30.5	2.8e-46
WP_011511198.1|3035516_3036713_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	52.2	1.3e-100
WP_011511199.1|3036770_3038123_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511200.1|3038451_3039762_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	40.9	1.3e-79
WP_081435005.1|3039762_3039891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358166.1|3039887_3040883_-	cytochrome-c peroxidase	NA	NA	NA	NA	NA
WP_011511202.1|3041313_3042669_+|transposase	IS5-like element ISNha6 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	45.0	2.0e-49
WP_157043634.1|3043405_3043774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358169.1|3043781_3043985_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511206.1|3044400_3045510_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_157043635.1|3045517_3046435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511208.1|3046444_3047617_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_011511209.1|3047634_3048933_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_011511210.1|3048929_3050627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041359023.1|3050675_3051443_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_011511212.1|3051446_3052520_+	CDP-glucose 4,6-dehydratase	NA	A0A0P0YMS6	Yellowstone_lake_phycodnavirus	24.6	1.2e-14
WP_011511213.1|3052516_3053068_+	dTDP-4-keto-6-deoxy-D-glucose epimerase	NA	I7HJC4	Enterobacteria_phage	38.1	3.2e-22
WP_011511214.1|3053064_3054291_+	class I SAM-dependent methyltransferase	NA	A0A1V0SJ68	Klosneuvirus	27.8	2.7e-29
WP_011511215.1|3054287_3055133_+	NAD(P)-dependent oxidoreductase	NA	M4QPK0	Synechococcus_phage	22.9	6.4e-06
WP_157043636.1|3055376_3055607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511216.1|3055616_3058520_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_011511217.1|3058649_3059807_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_041359025.1|3061003_3062176_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_011511220.1|3062708_3063857_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_011511221.1|3063866_3064724_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011511222.1|3064730_3065522_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	6.2e-11
WP_011511223.1|3065813_3066803_+	GDP-mannose 4,6-dehydratase	NA	M1HXY1	Acanthocystis_turfacea_Chlorella_virus	52.4	4.6e-96
WP_041358174.1|3066816_3067779_+	NAD-dependent epimerase/dehydratase family protein	NA	Q58M98	Prochlorococcus_phage	25.6	4.5e-08
WP_086008322.1|3068286_3069729_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.5	3.4e-52
WP_157043637.1|3070358_3070751_+|transposase	transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	47.9	5.7e-10
WP_011511226.1|3070734_3072009_-|transposase	IS256-like element ISNha10 family transposase	transposase	NA	NA	NA	NA
WP_011511227.1|3072388_3073141_-	ATPase AAA	NA	K4HZD4	Acidithiobacillus_phage	46.7	4.9e-58
>prophage 18
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	3144785	3151668	4406967	integrase	Escherichia_phage(33.33%)	11	3142931:3142945	3162621:3162635
3142931:3142945	attL	GCCTTGACCTCATCA	NA	NA	NA	NA
WP_041358191.1|3144785_3145079_-	hypothetical protein	NA	V5Q8V7	Xylella_phage	49.0	9.2e-05
WP_011511283.1|3145308_3145590_+	plasmid maintenance system killer protein	NA	A0A222YWE2	Escherichia_phage	35.5	5.4e-10
WP_011511284.1|3145612_3145915_+	HigA family addiction module antidote protein	NA	A0A222YWD7	Escherichia_phage	36.1	2.7e-07
WP_041358192.1|3146156_3146453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511286.1|3146473_3146806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049769349.1|3147112_3147421_+	ribonuclease HI	NA	A0A142CJN1	Brazilian_marseillevirus	41.8	2.4e-11
WP_011511288.1|3147417_3147666_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511289.1|3147918_3148998_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A291AUF0	Sinorhizobium_phage	30.7	2.3e-29
WP_011511290.1|3149147_3149480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358196.1|3149478_3150552_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_011511292.1|3150768_3151668_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	32.6	1.2e-34
3162621:3162635	attR	GCCTTGACCTCATCA	NA	NA	NA	NA
>prophage 19
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	3223151	3304320	4406967	transposase	Thermus_phage(14.29%)	59	NA	NA
WP_011508717.1|3223151_3224183_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	28.0	5.2e-10
WP_011511365.1|3224869_3225922_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_011511366.1|3226105_3226399_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_011511367.1|3226529_3227069_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_011511368.1|3227435_3227666_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511369.1|3228151_3228625_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511370.1|3229166_3230714_+	monooxygenase	NA	NA	NA	NA	NA
WP_086008361.1|3230755_3231190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511372.1|3231286_3232342_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011511373.1|3232556_3233090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511374.1|3233252_3233804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511375.1|3234094_3234967_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511376.1|3235112_3237032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081435073.1|3237358_3239089_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	28.8	3.5e-19
WP_011511378.1|3239127_3240471_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_081435017.1|3240487_3241264_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_011511380.1|3241665_3242022_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011511381.1|3242240_3243032_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041359062.1|3243463_3244300_-	molybdenum storage protein subunit alpha	NA	NA	NA	NA	NA
WP_011504826.1|3244535_3245771_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011511383.1|3245905_3246718_-	uridine monophosphate kinase	NA	NA	NA	NA	NA
WP_011511384.1|3248018_3249512_+	porin	NA	NA	NA	NA	NA
WP_011511385.1|3249703_3251221_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	36.6	1.9e-48
WP_011511386.1|3251334_3251745_-	DUF2237 domain-containing protein	NA	NA	NA	NA	NA
WP_011511387.1|3252186_3252834_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_041359063.1|3254054_3257699_+	nitrate reductase subunit alpha	NA	NA	NA	NA	NA
WP_081435018.1|3258124_3258418_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011511389.1|3258335_3259145_-	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_011511390.1|3259145_3259484_-	nitrite reductase small subunit NirD	NA	NA	NA	NA	NA
WP_011511391.1|3259483_3261937_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_041358209.1|3261933_3262254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511393.1|3262790_3263246_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_157043648.1|3263475_3264891_+	carbohydrate porin	NA	NA	NA	NA	NA
WP_011511395.1|3265331_3266954_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.4	3.5e-61
WP_081435019.1|3266989_3267307_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_157043777.1|3272004_3274161_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_011511397.1|3274484_3275480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511398.1|3275509_3277000_-	arylsulfatase	NA	NA	NA	NA	NA
WP_011511399.1|3277008_3277950_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_011511400.1|3277946_3278192_-	DUF3302 domain-containing protein	NA	NA	NA	NA	NA
WP_086008362.1|3278211_3279474_-	DUF1254 domain-containing protein	NA	M1IA53	Paramecium_bursaria_Chlorella_virus	28.0	1.4e-36
WP_011511402.1|3279768_3281169_-	DUF1254 domain-containing protein	NA	NA	NA	NA	NA
WP_011511403.1|3281180_3282203_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_157043649.1|3283183_3283855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511404.1|3283906_3286513_+	hypothetical protein	NA	A0A291AUU8	Sinorhizobium_phage	59.0	1.4e-40
WP_011511405.1|3288047_3289073_-	formylglycine-generating enzyme family protein	NA	NA	NA	NA	NA
WP_081435074.1|3289102_3289282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511407.1|3290045_3291149_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_157043650.1|3291278_3291395_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011511408.1|3292320_3292917_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
WP_011511409.1|3293055_3293748_-	response regulator	NA	NA	NA	NA	NA
WP_011511410.1|3293744_3296429_-	sensor histidine kinase KdpD	NA	NA	NA	NA	NA
WP_011511411.1|3296438_3297056_-	K(+)-transporting ATPase subunit C	NA	NA	NA	NA	NA
WP_011511412.1|3297065_3299135_-	potassium-transporting ATPase subunit KdpB	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	23.1	1.5e-24
WP_011511413.1|3299153_3300857_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_081435020.1|3300867_3300957_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_011511414.1|3302775_3303123_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_157043651.1|3303119_3303542_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_157043652.1|3303495_3304320_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	3310986	3389150	4406967	transposase	Tupanvirus(12.5%)	58	NA	NA
WP_011508717.1|3310986_3312018_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	28.0	5.2e-10
WP_041359085.1|3312479_3312917_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_041359087.1|3312913_3313147_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	39.0	3.5e-07
WP_011511422.1|3314253_3315327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081435021.1|3315323_3316502_-	PqqD family peptide modification chaperone	NA	NA	NA	NA	NA
WP_011511424.1|3316668_3316917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011508718.1|3318269_3319493_-|transposase	IS256-like element ISNha9 family transposase	transposase	A0A218MNI5	uncultured_virus	42.5	2.6e-40
WP_011511426.1|3319642_3319978_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358224.1|3320005_3320869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358226.1|3321023_3321227_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358228.1|3321350_3321584_+	DUF4082 domain-containing protein	NA	NA	NA	NA	NA
WP_041358229.1|3322136_3322325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511427.1|3324812_3325187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511428.1|3325344_3326394_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.8	5.2e-50
WP_011511429.1|3326622_3326955_-	VanZ family protein	NA	NA	NA	NA	NA
WP_081435076.1|3327219_3328236_+	serine/threonine protein phosphatase	NA	K4JNE2	Caulobacter_virus	38.8	5.4e-28
WP_011511431.1|3328308_3329622_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_157043779.1|3329621_3331313_-	type I secretion system permease/ATPase	NA	W8CYL7	Bacillus_phage	28.2	1.8e-20
WP_011511433.1|3331733_3335570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511434.1|3336010_3336793_+	FkbM family methyltransferase	NA	NA	NA	NA	NA
WP_011511435.1|3336830_3337637_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_011511436.1|3337677_3338982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358233.1|3339001_3340195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511438.1|3340235_3342380_-	glycosyltransferase	NA	A9YX16	Burkholderia_phage	28.7	5.7e-19
WP_011511439.1|3342490_3344005_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_157043780.1|3344284_3345586_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_011511441.1|3345649_3346789_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	30.8	1.1e-37
WP_049769433.1|3346785_3347781_-	NAD-dependent epimerase/dehydratase family protein	NA	M1NML0	Moumouvirus	32.6	3.0e-39
WP_011511443.1|3347854_3348958_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	E5ES42	Bathycoccus_sp._RCC1105_virus	31.9	7.0e-45
WP_011511444.1|3349143_3349653_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_081435023.1|3349711_3351214_-	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_011511446.1|3351267_3352035_-	acyltransferase	NA	NA	NA	NA	NA
WP_011511447.1|3352031_3353084_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_011511448.1|3353137_3354397_-	UDP-N-acetyl-D-mannosamine dehydrogenase	NA	NA	NA	NA	NA
WP_011511449.1|3354389_3355508_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	26.8	5.8e-23
WP_157043781.1|3355509_3356262_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_011511451.1|3356516_3357434_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_157043782.1|3357467_3358334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041359114.1|3358700_3360017_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011511454.1|3360130_3362353_-	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	28.9	6.1e-40
WP_011511455.1|3362330_3362669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049769354.1|3362718_3363609_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011511457.1|3363654_3368889_-	DUF4082 domain-containing protein	NA	NA	NA	NA	NA
WP_041358236.1|3369056_3369956_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	61.1	4.7e-100
WP_157043653.1|3369949_3370906_-	dTDP-4-dehydrorhamnose reductase	NA	A0A140G5S3	Enterobacteria_phage	36.9	7.6e-32
WP_011511460.1|3370865_3371918_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	49.8	5.0e-93
WP_041359122.1|3371935_3372490_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	40.2	4.7e-18
WP_011511462.1|3372896_3375215_+	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA	NA
WP_157043783.1|3375532_3376663_+	polysaccharide export protein	NA	NA	NA	NA	NA
WP_011510741.1|3377508_3378624_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011511465.1|3380380_3381532_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011511466.1|3381824_3382229_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_081435024.1|3382183_3382792_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011511468.1|3383825_3385298_+	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA	NA
WP_157043654.1|3385349_3385526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043784.1|3386443_3386809_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_011511471.1|3387739_3388132_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_041359133.1|3388607_3389150_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	3627932	3702617	4406967	tail,plate,transposase,integrase	Rhizobium_phage(20.0%)	82	3648968:3649018	3702621:3702671
WP_011509106.1|3627932_3629042_+|transposase	IS5-like element ISNha7 family transposase	transposase	NA	NA	NA	NA
WP_157043788.1|3630225_3632388_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_011511680.1|3632825_3633491_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011511681.1|3633487_3634786_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_011511682.1|3634766_3636164_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	30.9	2.6e-20
WP_011511683.1|3636164_3636839_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011511684.1|3637137_3638394_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011511685.1|3638414_3641567_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_041359187.1|3641688_3643137_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_011511687.1|3643372_3643978_-	FABP family protein	NA	NA	NA	NA	NA
WP_157043657.1|3644053_3644287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511688.1|3644575_3646264_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_157043658.1|3646950_3648042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511690.1|3648074_3648815_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
3648968:3649018	attL	CATGGTGGGCCCGGAGGGACTCGAACCCCCAACCAGACCGTTATGAGCGGC	NA	NA	NA	NA
WP_049769436.1|3649520_3649745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043659.1|3649741_3649942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043660.1|3649922_3651467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358281.1|3651707_3651905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358282.1|3652660_3652927_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511694.1|3653182_3653542_+	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_157043661.1|3655007_3655220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086008365.1|3655858_3656698_+|integrase	tyrosine-type recombinase/integrase	integrase	B4UTU2	Rhizobium_phage	46.6	9.9e-52
WP_157043662.1|3656891_3657413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511698.1|3657774_3658596_+	2OG-Fe(II) oxygenase	NA	NA	NA	NA	NA
WP_041358286.1|3658850_3659042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511699.1|3659217_3659451_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043663.1|3659539_3659704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041359191.1|3659861_3660104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511700.1|3660607_3660838_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511701.1|3661038_3661479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511702.1|3661478_3662243_-	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_041359193.1|3662442_3662730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511703.1|3662882_3663968_-	late control protein D	NA	R4JDM6	Burkholderia_phage	24.1	5.3e-21
WP_011511704.1|3664016_3664421_+	hypothetical protein	NA	R9TRP2	Rhizobium_phage	38.6	2.0e-13
WP_011511705.1|3664417_3664630_-|tail	tail protein X	tail	NA	NA	NA	NA
WP_011511706.1|3664636_3665062_-|tail	phage tail protein	tail	Q9ZXJ9	Pseudomonas_virus	30.8	8.1e-10
WP_157043789.1|3665061_3667152_-|tail	phage tail tape measure protein	tail	R9TP54	Rhizobium_phage	31.4	1.6e-34
WP_011511708.1|3667549_3667846_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_041358288.1|3667842_3668082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511710.1|3668319_3668835_-|tail	phage major tail tube protein	tail	R4JEU1	Burkholderia_phage	31.6	7.8e-15
WP_011511711.1|3668890_3670327_-|tail	tail protein	tail	V5YTI0	Pseudomonas_phage	43.8	6.4e-67
WP_157043664.1|3670369_3670858_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_011511713.1|3670854_3672561_-	hypothetical protein	NA	B5BTX4	Ralstonia_phage	37.4	4.2e-33
WP_157043665.1|3672561_3672738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511714.1|3672796_3675094_-	hypothetical protein	NA	A0A0A8ILB4	Aurantimonas_phage	27.6	3.1e-63
WP_011511715.1|3675090_3676359_-|tail	phage tail protein I	tail	NA	NA	NA	NA
WP_011511716.1|3676355_3677267_-|plate	baseplate J-like protein	plate	R4JDM0	Burkholderia_phage	38.4	6.8e-38
WP_041358291.1|3677266_3677647_-|plate	baseplate assembly protein	plate	K4I3Z7	Acidithiobacillus_phage	53.0	2.0e-20
WP_157043666.1|3677648_3677825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511718.1|3677836_3678364_-|plate	baseplate assembly protein	plate	NA	NA	NA	NA
WP_011511720.1|3679151_3679514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511721.1|3679526_3679853_-	DUF2190 family protein	NA	NA	NA	NA	NA
WP_081435028.1|3679900_3683482_-	hypothetical protein	NA	G8EXZ6	Synechococcus_phage	32.8	3.1e-86
WP_011511723.1|3683399_3683948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511724.1|3684140_3684719_-	hypothetical protein	NA	A0A0A8IL87	Aurantimonas_phage	41.8	4.5e-27
WP_011511725.1|3684885_3685137_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_011511726.1|3685184_3685385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511727.1|3685466_3685931_-	low affinity iron permease family protein	NA	G1JW61	Mycobacterium_phage	34.1	3.0e-05
WP_011511728.1|3686211_3686634_-	NusG antitermination factor	NA	NA	NA	NA	NA
WP_041358294.1|3686626_3686845_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_157043667.1|3686841_3687132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511730.1|3687205_3687577_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511731.1|3687585_3689133_-	bifunctional DNA primase/helicase	NA	A0A1X9SGS1	Bradyrhizobium_phage	38.9	7.4e-85
WP_011511732.1|3689325_3690282_-	DUF1376 domain-containing protein	NA	H2BD69	Pseudomonas_phage	44.2	2.0e-32
WP_041358296.1|3690412_3690625_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511733.1|3690670_3691063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043668.1|3691218_3691362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511734.1|3691458_3692013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511735.1|3692023_3692284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511736.1|3692362_3693085_+	phage repressor	NA	NA	NA	NA	NA
WP_041359207.1|3693137_3693371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511738.1|3693553_3693847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511739.1|3694000_3695065_-	ImmA/IrrE family metallo-endopeptidase	NA	B6SBZ6	Clostridium_virus	33.3	1.8e-34
WP_011511740.1|3695077_3695692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041359211.1|3696964_3697198_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043669.1|3697635_3697809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011511743.1|3698168_3698948_+	hypothetical protein	NA	G0ZND1	Cronobacter_phage	43.4	3.3e-33
WP_011511744.1|3699117_3699537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511745.1|3699673_3700135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511746.1|3700134_3700716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511747.1|3700715_3701084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011511748.1|3701378_3702617_+|integrase	tyrosine-type recombinase/integrase	integrase	B4UTU2	Rhizobium_phage	42.6	4.3e-67
3702621:3702671	attR	CATGGTGGGCCCGGAGGGACTCGAACCCCCAACCAGACCGTTATGAGCGGC	NA	NA	NA	NA
>prophage 22
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	4151739	4231107	4406967	tail,transposase	Leptospira_phage(14.29%)	58	NA	NA
WP_011510478.1|4151739_4152768_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_049769376.1|4154379_4155759_-	MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.6	8.9e-66
WP_157043689.1|4156192_4156483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041359274.1|4156572_4156893_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_011512129.1|4156897_4157467_+	hypothetical protein	NA	A0A1B1PDB7	Escherichia_phage	29.6	3.0e-15
WP_157043690.1|4157648_4158236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512131.1|4158232_4158997_+	metallophosphoesterase	NA	A0A076YQ07	Rhizobium_phage	37.2	1.5e-38
WP_011512132.1|4159070_4159448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043797.1|4159588_4161061_+	AAA family ATPase	NA	A0A0R6PGP8	Moraxella_phage	26.7	2.3e-11
WP_011512134.1|4161218_4162502_+	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_011512135.1|4163251_4166092_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_049769378.1|4166081_4167206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043691.1|4167450_4167924_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081435036.1|4167995_4168340_-	HNH endonuclease	NA	A0A1S6KZY3	Salmonella_phage	44.4	1.3e-10
WP_157043692.1|4169141_4169966_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011512140.1|4170390_4170828_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_011512141.1|4170827_4171289_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_011512143.1|4173127_4173490_+	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_011512144.1|4174099_4174603_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_011512145.1|4178079_4178391_+	polyhydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_157043693.1|4178320_4178644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512147.1|4182487_4182904_+	DUF2252 domain-containing protein	NA	NA	NA	NA	NA
WP_157043798.1|4184292_4184769_+|transposase	transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	47.9	5.3e-10
WP_011512149.1|4184749_4185103_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	48.4	1.4e-20
WP_011512150.1|4185157_4186732_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	33.7	7.1e-59
WP_011512152.1|4188441_4188774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043799.1|4188968_4189145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512155.1|4190556_4190907_-	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_011512157.1|4195227_4196229_+	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_011512158.1|4196428_4196668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512160.1|4199474_4199738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358422.1|4200156_4200660_-	phasin family protein	NA	NA	NA	NA	NA
WP_086008331.1|4200724_4202090_+|transposase	IS3 family transposase	transposase	Q88285	Snakehead_retrovirus	32.7	4.2e-07
WP_011512163.1|4202574_4203738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512164.1|4203948_4205763_+	AAA family ATPase	NA	A8ATK7	Listeria_phage	31.4	2.3e-05
WP_011512165.1|4205759_4207028_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_011512166.1|4207224_4208307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043694.1|4208309_4208828_-	DUF4917 family protein	NA	NA	NA	NA	NA
WP_157043695.1|4208831_4209326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512168.1|4209641_4210931_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358426.1|4210969_4211284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043696.1|4211508_4211703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512170.1|4211703_4212801_+	replication protein	NA	NA	NA	NA	NA
WP_011512171.1|4212873_4213215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512172.1|4213288_4213786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512173.1|4213794_4215705_+	cell division protein FtsK	NA	H0USY1	Bacillus_phage	31.0	2.3e-11
WP_011512174.1|4215784_4216258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043697.1|4216697_4217009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512176.1|4216983_4219671_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_011512177.1|4219810_4220182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043698.1|4220178_4220520_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011512179.1|4220542_4221856_+	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_011512180.1|4222056_4224993_+	N-6 DNA methylase	NA	Q6NE04	Leptospira_phage	24.9	1.7e-53
WP_011512181.1|4225030_4225255_-	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_011512182.1|4225251_4225827_-	helix-turn-helix domain-containing protein	NA	W6CWV1	Ralstonia_phage	41.9	2.6e-27
WP_041359283.1|4227012_4227210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043699.1|4227448_4228462_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512185.1|4228761_4231107_-|tail	tail fiber domain-containing protein	tail	A0A140B3N1	Vibrio_phage	31.3	1.7e-11
>prophage 23
NC_007964	Nitrobacter hamburgensis X14, complete genome	4406967	4239576	4368825	4406967	transposase,holin,integrase	Mycobacterium_phage(22.22%)	111	4234866:4234881	4251899:4251914
4234866:4234881	attL	GAGCACATCATCGCGC	NA	NA	NA	NA
WP_011512194.1|4239576_4240494_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_157043800.1|4240486_4240798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512196.1|4240977_4241622_+	AAA family ATPase	NA	A2I303	Vibrio_virus	47.5	6.5e-43
WP_011512197.1|4241618_4241885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512198.1|4241914_4243096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512199.1|4244071_4245685_+	recombinase family protein	NA	R9TP69	Rhizobium_phage	43.8	3.9e-113
WP_157043700.1|4246884_4247076_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358442.1|4248270_4248507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512200.1|4248503_4249718_-	PHB depolymerase family esterase	NA	NA	NA	NA	NA
WP_041359286.1|4249721_4250141_-	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_011512202.1|4251162_4251402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512203.1|4251422_4252361_-	Ku protein	NA	NA	NA	NA	NA
4251899:4251914	attR	GCGCGATGATGTGCTC	NA	NA	NA	NA
WP_157043701.1|4252975_4253677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512206.1|4255092_4256094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512207.1|4256090_4256627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512208.1|4256623_4257019_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_011512209.1|4257015_4257723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512210.1|4257816_4258278_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_011512211.1|4258304_4258565_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_157043702.1|4258696_4258816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512212.1|4258845_4261194_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_041358447.1|4263398_4264727_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.9	9.6e-33
WP_011512218.1|4271616_4272150_-	cytochrome b	NA	NA	NA	NA	NA
WP_081435039.1|4272396_4273476_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011512221.1|4274256_4274790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358451.1|4274973_4275231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358453.1|4275652_4275889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512223.1|4276092_4276437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043703.1|4276485_4277046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043704.1|4277186_4277327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081435041.1|4277412_4277502_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_157043705.1|4279030_4279204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512225.1|4279187_4281257_+	recombinase family protein	NA	R4TNI9	Mycobacterium_phage	24.4	5.9e-13
WP_011512227.1|4282779_4283805_-	ATP-dependent DNA ligase	NA	NA	NA	NA	NA
WP_011512228.1|4283831_4284641_-	Ku protein	NA	NA	NA	NA	NA
WP_011512229.1|4284718_4287421_+	DNA ligase D	NA	C5IHN5	Burkholderia_virus	40.5	1.3e-28
WP_011512230.1|4287451_4287667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512231.1|4288785_4289220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512233.1|4289538_4290699_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_011508919.1|4291478_4292342_-|transposase	transposase	transposase	A0A2L1IVB6	Escherichia_phage	30.7	1.3e-30
WP_011508918.1|4292341_4293841_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.7	3.9e-14
WP_086008372.1|4294086_4294764_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011512235.1|4295163_4296696_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011512236.1|4297248_4298085_+	Ku protein	NA	NA	NA	NA	NA
WP_011512240.1|4300721_4300961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043706.1|4301218_4301470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043707.1|4301507_4301651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512241.1|4301954_4303454_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_011512242.1|4303453_4304317_+|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	35.9	5.3e-32
WP_041358470.1|4305332_4305524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358471.1|4305568_4305751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043801.1|4305722_4305896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512243.1|4305914_4306094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049769391.1|4307185_4308478_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_041358474.1|4308563_4309934_+|transposase	IS701-like element ISNha1 family transposase	transposase	NA	NA	NA	NA
WP_157043708.1|4310287_4310584_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512246.1|4311029_4311473_-	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_157043709.1|4311659_4311797_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512247.1|4312311_4312578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043802.1|4314053_4315442_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_011512250.1|4316532_4317558_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011512251.1|4317876_4318086_-	photosystem reaction center subunit H	NA	NA	NA	NA	NA
WP_011512252.1|4318211_4318532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043710.1|4318748_4319033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512254.1|4319897_4320914_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_157043803.1|4321914_4322286_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081435044.1|4323346_4323664_+	plasmid stabilization protein	NA	NA	NA	NA	NA
WP_049769449.1|4324520_4324757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512221.1|4325284_4325818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512259.1|4325907_4326249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512261.1|4328848_4329877_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011512262.1|4330254_4330770_+	thermonuclease family protein	NA	NA	NA	NA	NA
WP_011512264.1|4331559_4331712_+	aa3-type cytochrome c oxidase subunit IV	NA	NA	NA	NA	NA
WP_011512265.1|4331995_4332280_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011512266.1|4332556_4333036_+	low affinity iron permease family protein	NA	Q19XG2	Mycobacterium_phage	38.4	2.8e-06
WP_011512267.1|4333037_4333610_+	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_011512268.1|4333795_4334620_-	YncE family protein	NA	NA	NA	NA	NA
WP_157043804.1|4335138_4335321_+	DUF1016 family protein	NA	NA	NA	NA	NA
WP_086008333.1|4335579_4336445_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_157043805.1|4336420_4337518_-	peptidase M15	NA	NA	NA	NA	NA
WP_011512270.1|4337744_4339307_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_081435045.1|4339320_4339683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512271.1|4339904_4340162_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011512272.1|4340513_4341788_+	amidohydrolase	NA	NA	NA	NA	NA
WP_011512273.1|4341920_4342589_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_011512274.1|4342627_4343155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043711.1|4343248_4343404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358489.1|4343485_4343881_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011512277.1|4344216_4345446_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_041358492.1|4346306_4346933_-	membrane protein	NA	NA	NA	NA	NA
WP_011512279.1|4347453_4348026_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011512280.1|4348141_4348993_+	4,5-DOPA dioxygenase extradiol	NA	NA	NA	NA	NA
WP_041358495.1|4349655_4349952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081435046.1|4350368_4350590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043712.1|4350902_4351988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043713.1|4352345_4352483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011512282.1|4352715_4353093_+	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_011512283.1|4353322_4354228_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_011512284.1|4354368_4355031_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_157043714.1|4358008_4358182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512288.1|4358954_4359137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512289.1|4359509_4359719_-	CsbD family protein	NA	NA	NA	NA	NA
WP_157043715.1|4360031_4360496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512291.1|4360263_4361562_-	chemotaxis protein CheR	NA	NA	NA	NA	NA
WP_011512292.1|4361758_4363687_+	ABC transporter ATP-binding protein/permease	NA	NA	NA	NA	NA
WP_157043716.1|4363740_4363932_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011512294.1|4364235_4364844_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011512295.1|4365011_4365515_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_157043806.1|4365797_4366775_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011512297.1|4367304_4368336_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_049769393.1|4368327_4368825_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	294829	22195	82179	294829	transposase	Pithovirus(25.0%)	46	NA	NA
WP_011505014.1|22195_23470_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_011505013.1|24400_25291_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_086008374.1|26061_26877_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011505012.1|27130_27364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049769456.1|27468_27909_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011505010.1|28064_28751_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011505009.1|28934_30254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011505007.1|33952_35374_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_011505006.1|35377_36388_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_086008375.1|36384_36492_+	DUF2474 family protein	NA	NA	NA	NA	NA
WP_011505005.1|36762_37200_+	universal stress protein	NA	NA	NA	NA	NA
WP_011505004.1|37861_38227_+	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_011505003.1|38669_39788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011505002.1|39969_40446_+	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	41.7	1.4e-15
WP_011505001.1|40530_43485_+	aconitate hydratase AcnA	NA	NA	NA	NA	NA
WP_011505000.1|43500_43971_+	VOC family protein	NA	NA	NA	NA	NA
WP_041359504.1|44225_45602_+	sulfite oxidase	NA	NA	NA	NA	NA
WP_011504998.1|45607_45973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043810.1|46511_46688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081434946.1|48872_49952_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_157043811.1|50825_51122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504994.1|52169_52322_-	aa3-type cytochrome c oxidase subunit IV	NA	NA	NA	NA	NA
WP_011504992.1|53682_54978_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
WP_011504991.1|55227_55992_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_157043812.1|57475_57646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043813.1|59891_60113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043814.1|60932_61109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011504989.1|64067_64772_+	DUF72 domain-containing protein	NA	A0A2K9L3D5	Tupanvirus	25.7	3.1e-06
WP_041359399.1|65313_65544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504988.1|65769_66132_+	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_157043815.1|66460_66679_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011504986.1|66724_67234_-	membrane protein	NA	NA	NA	NA	NA
WP_041359401.1|67230_68283_-	type III polyketide synthase	NA	NA	NA	NA	NA
WP_011504984.1|68423_68915_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_011504983.1|69074_69317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043816.1|69575_69830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011504982.1|70217_70475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504981.1|70444_71398_+	cation transporter	NA	NA	NA	NA	NA
WP_011504979.1|72005_72449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011504978.1|72562_72934_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_011504975.1|74463_74946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041359410.1|75541_76870_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.9	8.1e-32
WP_041359519.1|77930_78980_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_157043817.1|79287_79458_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504970.1|79501_79672_-	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
WP_086008376.1|81421_82179_-|transposase	IS5 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	35.5	3.8e-10
>prophage 2
NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	294829	86970	130301	294829	transposase	Streptococcus_phage(50.0%)	27	NA	NA
WP_011504965.1|86970_88041_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011504826.1|89881_91117_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_041359415.1|93424_93742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504961.1|97803_98853_+|transposase	IS110 family transposase	transposase	A0A1X9I5Z0	Streptococcus_phage	32.2	1.6e-06
WP_011504958.1|103918_104608_+	DUF1236 domain-containing protein	NA	NA	NA	NA	NA
WP_081435098.1|105191_105473_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011504956.1|105525_105750_-	DUF2171 domain-containing protein	NA	NA	NA	NA	NA
WP_011504955.1|106151_106316_+	DUF3309 family protein	NA	NA	NA	NA	NA
WP_011504953.1|109271_109673_-	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_011504952.1|111802_112012_-	CsbD family protein	NA	NA	NA	NA	NA
WP_011504951.1|112223_112595_-	response regulator	NA	NA	NA	NA	NA
WP_049769463.1|112551_113676_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_049769464.1|113612_116723_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_157043818.1|117332_117515_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504950.1|118361_118868_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_041359424.1|119968_120301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504948.1|120468_120702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086008376.1|120834_121592_-|transposase	IS5 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	35.5	3.8e-10
WP_011504947.1|121754_122012_-	bacterioferritin	NA	NA	NA	NA	NA
WP_011504826.1|122903_124139_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_157043819.1|125328_125559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041359432.1|125549_125882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043820.1|125905_126628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043821.1|126928_127318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011504943.1|128835_129198_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_086008377.1|129373_129754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086008378.1|129797_130301_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 3
NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	294829	165789	212259	294829	transposase	Burkholderia_virus(33.33%)	39	NA	NA
WP_081435090.1|165789_166116_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_049769465.1|166611_168171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086008380.1|168525_169756_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	64.7	3.4e-101
WP_157043826.1|171365_171644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086008381.1|171873_172634_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011504903.1|173268_174231_-	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_011504902.1|174651_176631_-	glycosyltransferase	NA	M1I5K9	Paramecium_bursaria_Chlorella_virus	24.9	4.0e-19
WP_011504901.1|176630_177800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043827.1|177853_178858_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_011504899.1|179280_179568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081435091.1|179704_180895_-	glycogen synthase	NA	NA	NA	NA	NA
WP_011504897.1|181357_181597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043828.1|182319_183174_+	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
WP_081435092.1|184346_184568_+	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA	NA
WP_011504892.1|186157_186760_+	cupin	NA	NA	NA	NA	NA
WP_011504891.1|186756_187104_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_011504890.1|187100_187535_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_011504889.1|187559_188663_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011504887.1|189335_189917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504885.1|191873_192944_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_041359452.1|193265_193481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043829.1|193864_194659_+	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA	NA
WP_157043830.1|198090_198321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043831.1|198343_198487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081435093.1|199578_200151_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011504878.1|202171_202525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049769471.1|202620_202869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504876.1|203949_204327_+	PRC-barrel domain containing protein	NA	NA	NA	NA	NA
WP_157043846.1|204578_204704_+	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
WP_157043832.1|205654_205822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011504875.1|205919_206174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043833.1|206372_206552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011504874.1|206675_206966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157043847.1|207395_207599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157043834.1|208110_209088_+|transposase	IS5 family transposase	transposase	A0A077SK28	Escherichia_phage	45.8	4.8e-74
WP_041359457.1|209529_209712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081434946.1|209827_210907_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011504870.1|211020_211476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011504869.1|211503_212259_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NC_007961	Nitrobacter hamburgensis X14 plasmid 3, complete sequence	121408	13054	54199	121408	transposase,integrase	Ochrobactrum_phage(28.57%)	41	25052:25066	38244:38258
WP_011505211.1|13054_14200_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011505212.1|14412_14742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011505213.1|14843_15548_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011505214.1|15987_17289_-	IncP-type conjugal transfer protein TrbI	NA	NA	NA	NA	NA
WP_011505215.1|17299_17752_-	conjugal transfer protein TrbH	NA	NA	NA	NA	NA
WP_011505216.1|17754_18594_-	P-type conjugative transfer protein TrbG	NA	NA	NA	NA	NA
WP_011505217.1|18611_19274_-	conjugal transfer protein TrbF	NA	NA	NA	NA	NA
WP_011505218.1|19316_20471_-	P-type conjugative transfer protein TrbL	NA	NA	NA	NA	NA
WP_157043863.1|20483_20780_-	entry exclusion protein TrbK	NA	NA	NA	NA	NA
WP_011505220.1|20665_21463_-	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA	NA
WP_011505221.1|21434_23888_-	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA	NA
WP_011505222.1|23897_24197_-	conjugal transfer protein TrbD	NA	NA	NA	NA	NA
WP_011505223.1|24189_24561_-	conjugal transfer protein TrbC	NA	NA	NA	NA	NA
WP_041359818.1|24550_25519_-	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA	NA
25052:25066	attL	GCCCGAGCCGGTGCC	NA	NA	NA	NA
WP_011505225.1|25536_26160_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011505226.1|26575_27790_+	plasmid partitioning protein RepA	NA	A0A240F4U1	Ochrobactrum_phage	50.8	1.6e-103
WP_011505227.1|27786_28818_+	plasmid partitioning protein RepB	NA	A0A240F4U0	Ochrobactrum_phage	36.0	5.2e-34
WP_011505228.1|29094_30420_+	replication initiation protein RepC	NA	L7TKN6	Rhizobium_phage	29.7	1.9e-28
WP_041359822.1|30501_30750_+	plasmid stabilization protein	NA	NA	NA	NA	NA
WP_011505230.1|30746_31160_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_011505231.1|31164_32238_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_011505232.1|32240_32627_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_011505233.1|32626_32881_-	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA	NA
WP_011505234.1|33182_34838_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_041359759.1|34828_35758_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_157043872.1|35718_36975_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011505237.1|37168_38113_+	DUF1403 family protein	NA	NA	NA	NA	NA
WP_086008387.1|38211_38829_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
38244:38258	attR	GCCCGAGCCGGTGCC	NA	NA	NA	NA
WP_157043864.1|39116_39290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081435108.1|39424_39991_+	DUF1612 domain-containing protein	NA	NA	NA	NA	NA
WP_011505239.1|40049_40340_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_041359829.1|40336_40843_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011505241.1|41154_42996_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.2	5.6e-15
WP_011510130.1|43981_45325_+|transposase	IS1380-like element ISNha3 family transposase	transposase	NA	NA	NA	NA
WP_157043865.1|45568_45823_+	hypothetical protein	NA	A0A077KET4	Ralstonia_phage	49.4	5.9e-16
WP_157043866.1|45835_46096_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011505244.1|46676_48005_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_011505245.1|50050_50476_+|transposase	IS200/IS605 family transposase	transposase	Q331U4	Clostridium_botulinum_C_phage	38.9	3.3e-19
WP_011505246.1|50683_51910_+	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	63.3	2.1e-114
WP_011505247.1|51952_53017_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011505248.1|53095_54199_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
