The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009434	Pseudomonas stutzeri A1501, complete sequence	4567418	57078	68390	4567418		Bacillus_phage(100.0%)	7	NA	NA
WP_011911301.1|57078_57468_-	response regulator	NA	W8CYM9	Bacillus_phage	40.3	3.4e-15
WP_041755180.1|57464_60341_-	CHASE3 domain-containing protein	NA	W8CYF6	Bacillus_phage	33.5	4.5e-27
WP_011911303.1|60468_62109_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.8	9.1e-17
WP_003282388.1|62101_62491_-	response regulator	NA	W8CYM9	Bacillus_phage	31.6	2.0e-07
WP_041755181.1|62487_64899_-	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	35.1	2.9e-27
WP_011911305.1|64975_65362_-	response regulator	NA	W8CYM9	Bacillus_phage	35.0	1.2e-12
WP_041755182.1|65411_68390_-	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	34.3	2.1e-27
>prophage 3
NC_009434	Pseudomonas stutzeri A1501, complete sequence	4567418	2146615	2160388	4567418		uncultured_Caudovirales_phage(75.0%)	12	NA	NA
WP_011913122.1|2146615_2149147_+	pyrroloquinoline quinone biosynthesis protein PqqF	NA	A0A1V0SJA4	Klosneuvirus	29.0	3.5e-15
WP_011913123.1|2149404_2150595_+	porin	NA	NA	NA	NA	NA
WP_013982686.1|2150909_2152073_+	FIST C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011913125.1|2152002_2154642_+	PAS-domain containing protein	NA	A0A2K9L5I4	Tupanvirus	28.6	2.6e-13
WP_011913126.1|2154672_2155677_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_041755479.1|2155761_2156745_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	74.3	3.5e-141
WP_014596613.1|2156741_2157074_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	73.4	7.7e-40
WP_019406273.1|2157070_2157373_-	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	57.0	3.5e-23
WP_011913129.1|2157372_2157732_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	62.5	9.8e-33
WP_013982693.1|2157731_2158124_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	72.1	1.5e-47
WP_019406271.1|2158351_2159620_+	MFS transporter	NA	NA	NA	NA	NA
WP_011913132.1|2159719_2160388_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	76.7	7.6e-87
>prophage 4
NC_009434	Pseudomonas stutzeri A1501, complete sequence	4567418	3581244	3653893	4567418	transposase,protease,tRNA,integrase	Bodo_saltans_virus(11.11%)	57	3573768:3573783	3642117:3642132
3573768:3573783	attL	GCTCTGCGCTGCGGCG	NA	NA	NA	NA
WP_011914370.1|3581244_3582162_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_011914371.1|3582164_3582554_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_011914372.1|3582656_3585170_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.9	1.4e-21
WP_011914373.1|3585198_3586680_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_013983874.1|3586727_3587186_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_013983875.1|3587578_3587962_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_011914376.1|3587966_3588722_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_013983877.1|3588787_3590125_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_011914378.1|3590135_3590987_-	dihydropteroate synthase	NA	NA	NA	NA	NA
WP_020699857.1|3591155_3593069_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	I3UL75	Ostreococcus_lucimarinus_virus	48.0	1.4e-114
WP_011914380.1|3593683_3593995_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_011914381.1|3594022_3594457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011914382.1|3594434_3594911_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_011914383.1|3594907_3598129_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_011914384.1|3598165_3599314_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	NA	NA	NA	NA
WP_011914385.1|3599530_3600337_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_013983884.1|3600418_3601549_-	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	39.9	6.7e-27
WP_011914387.1|3601672_3603586_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	52.3	2.0e-148
WP_011914388.1|3603684_3604254_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_011914389.1|3604455_3606129_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_011914390.1|3606191_3606596_-	ferric iron uptake transcriptional regulator	NA	NA	NA	NA	NA
WP_041755721.1|3606691_3607204_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_011914392.1|3607244_3607559_-	RnfH family protein	NA	NA	NA	NA	NA
WP_011914393.1|3607551_3607986_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_011914394.1|3608192_3608675_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	46.7	2.6e-28
WP_011914395.1|3608727_3609519_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011914396.1|3609788_3611483_+	L-lactate permease	NA	NA	NA	NA	NA
WP_011914397.1|3611737_3612559_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_011914398.1|3612555_3614016_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
WP_011914399.1|3614012_3614684_+	lactate utilization protein	NA	NA	NA	NA	NA
WP_011914400.1|3614680_3617533_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_013983892.1|3617714_3618020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011914403.1|3621233_3622493_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_085988588.1|3623770_3624857_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	37.8	3.8e-43
WP_071534424.1|3626821_3627184_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_026084028.1|3627207_3627771_+	chlorite dismutase family protein	NA	NA	NA	NA	NA
WP_011914409.1|3627915_3630081_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_011914410.1|3630077_3631097_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_011914412.1|3631390_3631822_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1B1ITQ0	uncultured_Mediterranean_phage	40.4	1.8e-09
WP_011914413.1|3631904_3632618_+	SOS response-associated peptidase family protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	46.2	1.6e-55
WP_020307717.1|3632994_3633888_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011914415.1|3633898_3634846_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_020307713.1|3636690_3637008_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011914418.1|3637031_3640154_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_011914419.1|3640156_3641794_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003296208.1|3641790_3643077_-	TolC family protein	NA	NA	NA	NA	NA
3642117:3642132	attR	GCTCTGCGCTGCGGCG	NA	NA	NA	NA
WP_181063899.1|3643881_3644154_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011914420.1|3644168_3646361_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_003292130.1|3646361_3647051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003298494.1|3647047_3647851_+	cytochrome c3 family protein	NA	NA	NA	NA	NA
WP_003298493.1|3647862_3648198_+	DUF1622 domain-containing protein	NA	NA	NA	NA	NA
WP_003292133.1|3648431_3648761_-	DUF2790 domain-containing protein	NA	NA	NA	NA	NA
WP_011914422.1|3649771_3650107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011914423.1|3650302_3650596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003292136.1|3651200_3651656_+	DUF305 domain-containing protein	NA	W6GVI1	Samba_virus	39.4	1.2e-06
WP_003458515.1|3652095_3652365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011911868.1|3652354_3653893_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NC_009434	Pseudomonas stutzeri A1501, complete sequence	4567418	3668413	3712321	4567418	transposase,integrase	Acidithiobacillus_phage(50.0%)	35	3685342:3685357	3734748:3734763
WP_041755227.1|3668413_3670093_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	56.8	1.2e-165
WP_031297278.1|3669980_3670730_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	59.3	2.2e-79
WP_011911882.1|3671820_3673326_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	55.1	8.9e-152
WP_041755728.1|3674483_3674780_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_011914442.1|3674844_3675483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020307703.1|3676541_3678263_-	potassium/proton antiporter	NA	NA	NA	NA	NA
WP_011914444.1|3678463_3678955_+	phosphatidylglycerophosphatase A	NA	NA	NA	NA	NA
WP_011914445.1|3679179_3681057_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_003152807.1|3681628_3682249_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_187283639.1|3682535_3683063_+	DMT family transporter	NA	NA	NA	NA	NA
WP_011914447.1|3683249_3684764_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	52.4	4.8e-145
WP_011914448.1|3684781_3685537_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	54.7	8.3e-74
3685342:3685357	attL	CGACCGCTACGGCCAG	NA	NA	NA	NA
WP_187283640.1|3685657_3686047_+	EamA family transporter	NA	NA	NA	NA	NA
WP_080977923.1|3686328_3687555_+	TraI domain-containing protein	NA	NA	NA	NA	NA
WP_020307701.1|3687595_3688459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011914453.1|3689414_3690047_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011914454.1|3690133_3691024_-	cation transporter	NA	NA	NA	NA	NA
WP_019405735.1|3691545_3691863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011911495.1|3692463_3693492_+|transposase	IS30-like element ISPsp7 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.2	5.9e-46
WP_013982153.1|3694576_3695251_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.1	1.6e-28
WP_011914459.1|3695567_3696887_-	OprD family porin	NA	NA	NA	NA	NA
WP_011914460.1|3697188_3698430_+	TolC family protein	NA	NA	NA	NA	NA
WP_011914461.1|3698471_3699779_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_041755740.1|3699798_3702963_+	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA	NA
WP_003282470.1|3703190_3703421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011914465.1|3703821_3704742_+	cation transporter	NA	NA	NA	NA	NA
WP_011911785.1|3704936_3705974_-|transposase	IS630-like element ISPa47 family transposase	transposase	NA	NA	NA	NA
WP_003089120.1|3706244_3706643_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003089115.1|3706717_3707068_+	mercury transporter MerT	NA	NA	NA	NA	NA
WP_003150552.1|3707080_3707356_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
WP_003089113.1|3707363_3707576_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003299771.1|3707588_3710582_-|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	47.6	5.7e-259
WP_003150546.1|3710585_3710996_-	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA	NA
WP_003089107.1|3710995_3711235_-	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003291594.1|3711427_3712321_-|integrase	integrase	integrase	NA	NA	NA	NA
3734748:3734763	attR	CTGGCCGTAGCGGTCG	NA	NA	NA	NA
