assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000013745.1_ASM1374v1	NC_007925	Rhodopseudomonas palustris BisB18, complete sequence	1	1353981-1354085	1	CRISPRCasFinder	no		DEDDh,csa3,cas2,cas1,cas9	Orphan	GGCGCCATCGCCCCCTCGAAAACCCCCGCCGCGCCGATC	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas2,cas1,cas9	NA|75aa|up_6|NC_007925.1_1347029_1347254_+,NA|219aa|down_3|NC_007925.1_1356744_1357401_+,NA|90aa|down_4|NC_007925.1_1357410_1357680_+,NA|150aa|down_5|NC_007925.1_1358011_1358461_+	NA|720aa|up_9|NC_007925.1_1343314_1345474_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|125aa|up_8|NC_007925.1_1345582_1345957_+	cd18161, REC_hyHK_blue-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinase/response regulators similar to Pseudomonas savastanoi blue-light-activated histidine kinase	NA|276aa|up_7|NC_007925.1_1346107_1346935_+	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only]	NA|75aa|up_6|NC_007925.1_1347029_1347254_+	NA	NA|286aa|up_5|NC_007925.1_1347263_1348121_+	cd05355, SDR_c1, classical (c) SDR, subgroup 1	NA|236aa|up_4|NC_007925.1_1348468_1349176_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|551aa|up_3|NC_007925.1_1349325_1350978_+	PRK07564, PRK07564, phosphoglucomutase; Validated	NA|239aa|up_2|NC_007925.1_1351270_1351987_+	pfam07298, NnrU, NnrU protein	NA|404aa|up_1|NC_007925.1_1352092_1353304_+	pfam05940, NnrS, NnrS protein	NA|86aa|up_0|NC_007925.1_1353327_1353585_+	COG4309, COG4309, Uncharacterized conserved protein [Function unknown]	NA|52aa|down_0|NC_007925.1_1354750_1354906_+	pfam00556, LHC, Antenna complex alpha/beta subunit	NA|60aa|down_1|NC_007925.1_1354918_1355098_+	pfam00556, LHC, Antenna complex alpha/beta subunit	NA|485aa|down_2|NC_007925.1_1355293_1356748_+	pfam03209, PUCC, PUCC protein	NA|219aa|down_3|NC_007925.1_1356744_1357401_+	NA	NA|90aa|down_4|NC_007925.1_1357410_1357680_+	NA	NA|150aa|down_5|NC_007925.1_1358011_1358461_+	NA	NA|153aa|down_6|NC_007925.1_1358690_1359149_-	pfam09537, DUF2383, Domain of unknown function (DUF2383)	NA|410aa|down_7|NC_007925.1_1359262_1360492_-	COG1035, FrhB, Coenzyme F420-reducing hydrogenase, beta subunit [Energy production and conversion]	NA|169aa|down_8|NC_007925.1_1360588_1361095_-	pfam08547, CIA30, Complex I intermediate-associated protein 30 (CIA30)	NA|547aa|down_9|NC_007925.1_1361376_1363017_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]
GCF_000013745.1_ASM1374v1	NC_007925	Rhodopseudomonas palustris BisB18, complete sequence	2	3779627-3779728	2	CRISPRCasFinder	no		DEDDh,csa3,cas2,cas1,cas9	Orphan	TCGCTTCGCTCATCCGGGCTACGCTTGCT	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas2,cas1,cas9	NA|109aa|up_8|NC_007925.1_3773838_3774165_+,NA|74aa|up_6|NC_007925.1_3775238_3775460_-,NA|93aa|up_4|NC_007925.1_3776972_3777251_+,NA|113aa|up_0|NC_007925.1_3779181_3779520_+,NA|59aa|down_1|NC_007925.1_3780405_3780582_-,NA|104aa|down_7|NC_007925.1_3786306_3786618_-,NA|160aa|down_9|NC_007925.1_3790400_3790880_+	NA|1164aa|up_9|NC_007925.1_3770016_3773508_-	PRK09193, PRK09193, indolepyruvate ferredoxin oxidoreductase; Validated	NA|109aa|up_8|NC_007925.1_3773838_3774165_+	NA	NA|270aa|up_7|NC_007925.1_3774266_3775076_-	pfam06966, DUF1295, Protein of unknown function (DUF1295)	NA|74aa|up_6|NC_007925.1_3775238_3775460_-	NA	NA|337aa|up_5|NC_007925.1_3775647_3776658_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|93aa|up_4|NC_007925.1_3776972_3777251_+	NA	NA|264aa|up_3|NC_007925.1_3777307_3778099_-	pfam17923, TetR_C_18, Tetracyclin repressor-like, C-terminal domain	NA|222aa|up_2|NC_007925.1_3778193_3778859_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|77aa|up_1|NC_007925.1_3778958_3779189_+	pfam09000, Cytotoxic, Cytotoxic	NA|113aa|up_0|NC_007925.1_3779181_3779520_+	NA	NA|223aa|down_0|NC_007925.1_3779740_3780409_-	pfam02661, Fic, Fic/DOC family	NA|59aa|down_1|NC_007925.1_3780405_3780582_-	NA	NA|511aa|down_2|NC_007925.1_3780672_3782205_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|273aa|down_3|NC_007925.1_3782427_3783246_-	COG2602, COG2602, Beta-lactamase class D [Defense mechanisms]	NA|89aa|down_4|NC_007925.1_3783445_3783712_-	pfam01312, Bac_export_2, FlhB HrpN YscU SpaS Family	NA|580aa|down_5|NC_007925.1_3783708_3785448_-	pfam02120, Flg_hook, Flagellar hook-length control protein FliK	NA|262aa|down_6|NC_007925.1_3785508_3786294_-	COG5387, COG5387, Chaperone required for the assembly of the mitochondrial F1-ATPase [Posttranslational modification, protein turnover, chaperones]	NA|104aa|down_7|NC_007925.1_3786306_3786618_-	NA	NA|502aa|down_8|NC_007925.1_3786649_3788155_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|160aa|down_9|NC_007925.1_3790400_3790880_+	NA
GCF_000013745.1_ASM1374v1	NC_007925	Rhodopseudomonas palustris BisB18, complete sequence	3	3791046-3791121	3	CRISPRCasFinder	no		DEDDh,csa3,cas2,cas1,cas9	Orphan	TCGCTGCGCTCATGCGGGCTACT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas2,cas1,cas9	NA|59aa|up_8|NC_007925.1_3780405_3780582_-,NA|104aa|up_2|NC_007925.1_3786306_3786618_-,NA|160aa|up_0|NC_007925.1_3790400_3790880_+,NA|204aa|down_5|NC_007925.1_3795704_3796316_-	NA|223aa|up_9|NC_007925.1_3779740_3780409_-	pfam02661, Fic, Fic/DOC family	NA|59aa|up_8|NC_007925.1_3780405_3780582_-	NA	NA|511aa|up_7|NC_007925.1_3780672_3782205_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|273aa|up_6|NC_007925.1_3782427_3783246_-	COG2602, COG2602, Beta-lactamase class D [Defense mechanisms]	NA|89aa|up_5|NC_007925.1_3783445_3783712_-	pfam01312, Bac_export_2, FlhB HrpN YscU SpaS Family	NA|580aa|up_4|NC_007925.1_3783708_3785448_-	pfam02120, Flg_hook, Flagellar hook-length control protein FliK	NA|262aa|up_3|NC_007925.1_3785508_3786294_-	COG5387, COG5387, Chaperone required for the assembly of the mitochondrial F1-ATPase [Posttranslational modification, protein turnover, chaperones]	NA|104aa|up_2|NC_007925.1_3786306_3786618_-	NA	NA|502aa|up_1|NC_007925.1_3786649_3788155_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|160aa|up_0|NC_007925.1_3790400_3790880_+	NA	NA|180aa|down_0|NC_007925.1_3791358_3791898_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|203aa|down_1|NC_007925.1_3792074_3792683_-	pfam04940, BLUF, Sensors of blue-light using FAD	NA|219aa|down_2|NC_007925.1_3792839_3793496_-	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)	NA|509aa|down_3|NC_007925.1_3793733_3795260_+	PRK12472, PRK12472, hypothetical protein; Provisional	NA|140aa|down_4|NC_007925.1_3795268_3795688_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|204aa|down_5|NC_007925.1_3795704_3796316_-	NA	NA|328aa|down_6|NC_007925.1_3796540_3797524_+	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)	NA|358aa|down_7|NC_007925.1_3797605_3798679_-	cd01902, Ntn_CGH, Choloylglycine hydrolase (CGH) is a bile salt-modifying enzyme that hydrolyzes non-peptide carbon-nitrogen bonds in choloylglycine and choloyltaurine, both of which are present in bile	NA|962aa|down_8|NC_007925.1_3799040_3801926_+	cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins	NA|336aa|down_9|NC_007925.1_3802009_3803017_+	COG3591, COG3591, V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]
GCF_000013745.1_ASM1374v1	NC_007925	Rhodopseudomonas palustris BisB18, complete sequence	4	4995446-4996735	4,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas9	DEDDh,csa3,cas2,cas1,cas9	Type II-B, Type II-B,Type II-C,Type II-A, or Type II-C?	GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT,GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT,GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCTC,GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT	36,36,37,36	0	0	NA	NA	NA:NA:NA:NA	19,19,14,14	19	TypeII-B,TypeII-B,TypeII-C,TypeII-A,orTypeII-C?	DEDDh,csa3,cas2,cas1,cas9	NA|107aa|up_1|NC_007925.1_4994564_4994885_-,NA|207aa|down_5|NC_007925.1_5004883_5005504_-,NA|118aa|down_8|NC_007925.1_5007921_5008275_-	NA|285aa|up_9|NC_007925.1_4979907_4980762_+	TIGR03309, matur_yqeB, selenium-dependent molybdenum hydroxylase system protein, YqeB family	NA|555aa|up_8|NC_007925.1_4980942_4982607_+	COG1032, COG1032, Fe-S oxidoreductase [Energy production and conversion]	NA|260aa|up_7|NC_007925.1_4982632_4983412_+	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|1038aa|up_6|NC_007925.1_4983536_4986650_+	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein	NA|885aa|up_5|NC_007925.1_4986852_4989507_+	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|503aa|up_4|NC_007925.1_4989614_4991123_-	COG0433, COG0433,  HerA helicase [Replication, recombination, and repair]	NA|283aa|up_3|NC_007925.1_4991280_4992129_+	COG4798, COG4798, Predicted methyltransferase [General function prediction only]	NA|727aa|up_2|NC_007925.1_4992338_4994519_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|107aa|up_1|NC_007925.1_4994564_4994885_-	NA	NA|87aa|up_0|NC_007925.1_4995129_4995390_-	cd11557, ST7, Suppression of tumorigenicity 7	cas2|110aa|down_0|NC_007925.1_4996793_4997123_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|300aa|down_1|NC_007925.1_4997119_4998019_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1067aa|down_2|NC_007925.1_4997994_5001195_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|502aa|down_3|NC_007925.1_5001855_5003361_+	pfam00665, rve, Integrase core domain	NA|278aa|down_4|NC_007925.1_5003354_5004188_+	PRK08181, PRK08181, transposase; Validated	NA|207aa|down_5|NC_007925.1_5004883_5005504_-	NA	NA|301aa|down_6|NC_007925.1_5006202_5007105_-	PRK10463, PRK10463, hydrogenase nickel incorporation protein HypB; Provisional	NA|233aa|down_7|NC_007925.1_5007132_5007831_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|118aa|down_8|NC_007925.1_5007921_5008275_-	NA	NA|69aa|down_9|NC_007925.1_5008271_5008478_-	pfam10133, RNA_bind_2, Predicted RNA-binding protein
