assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000013605.1_ASM1360v1	NC_007908	Rhodoferax ferrireducens T118, complete sequence	1	2155554-2155639	1	CRISPRCasFinder	no		PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	TTGCGGGACAGACCGTAGTTACACG	25	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,cas6e,csf3gr5,csf2gr7,csf1gr8	NA,NA	NA|443aa|up_9|NC_007908.1_2143436_2144765_-	PRK07056, PRK07056, amidase; Provisional	NA|251aa|up_8|NC_007908.1_2144939_2145692_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|308aa|up_7|NC_007908.1_2145779_2146703_+	PRK09377, tsf, elongation factor Ts; Provisional	NA|241aa|up_6|NC_007908.1_2146812_2147535_+	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway)	NA|187aa|up_5|NC_007908.1_2147595_2148156_+	PRK00083, frr, ribosome recycling factor; Reviewed	NA|282aa|up_4|NC_007908.1_2148254_2149100_+	PRK11624, cdsA, phosphatidate cytidylyltransferase	NA|405aa|up_3|NC_007908.1_2149108_2150323_+	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional	NA|454aa|up_2|NC_007908.1_2150341_2151703_+	PRK10779, PRK10779, sigma E protease regulator RseP	NA|761aa|up_1|NC_007908.1_2151752_2154035_+	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein	NA|175aa|up_0|NC_007908.1_2154034_2154559_+	smart00935, OmpH, Outer membrane protein (OmpH-like)	NA|146aa|down_0|NC_007908.1_2155677_2156115_+	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|265aa|down_1|NC_007908.1_2156125_2156920_+	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA|378aa|down_2|NC_007908.1_2156979_2158113_+	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed	NA|208aa|down_3|NC_007908.1_2158120_2158744_+	PRK00015, rnhB, ribonuclease HII; Validated	NA|265aa|down_4|NC_007908.1_2158740_2159535_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|396aa|down_5|NC_007908.1_2159687_2160875_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|227aa|down_6|NC_007908.1_2160871_2161552_+	PRK10958, PRK10958, leucine export protein LeuE; Provisional	NA|1099aa|down_7|NC_007908.1_2161638_2164935_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|159aa|down_8|NC_007908.1_2165120_2165597_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|138aa|down_9|NC_007908.1_2165598_2166012_+	pfam13664, DUF4149, Domain of unknown function (DUF4149)
GCF_000013605.1_ASM1360v1	NC_007908	Rhodoferax ferrireducens T118, complete sequence	2	2768554-2768636	2	CRISPRCasFinder	no		PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	GTGTAACTACGGTCTGTCCCGCAA	24	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,cas6e,csf3gr5,csf2gr7,csf1gr8	NA|315aa|up_7|NC_007908.1_2761589_2762534_-,NA|201aa|up_5|NC_007908.1_2764042_2764645_-,NA|186aa|up_4|NC_007908.1_2764674_2765232_-,NA|173aa|down_7|NC_007908.1_2776629_2777148_-	NA|872aa|up_9|NC_007908.1_2757893_2760509_+	pfam14403, CP_ATPgrasp_2, Circularly permuted ATP-grasp type 2	NA|331aa|up_8|NC_007908.1_2760505_2761498_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|315aa|up_7|NC_007908.1_2761589_2762534_-	NA	NA|491aa|up_6|NC_007908.1_2762537_2764010_-	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]	NA|201aa|up_5|NC_007908.1_2764042_2764645_-	NA	NA|186aa|up_4|NC_007908.1_2764674_2765232_-	NA	NA|97aa|up_3|NC_007908.1_2765228_2765519_-	TIGR03831, hypothetical_protein, YgiT-type zinc finger domain	NA|324aa|up_2|NC_007908.1_2765518_2766490_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|408aa|up_1|NC_007908.1_2766500_2767724_-	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|152aa|up_0|NC_007908.1_2768018_2768474_+	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|590aa|down_0|NC_007908.1_2768640_2770410_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|162aa|down_1|NC_007908.1_2770503_2770989_-	cd00483, HPPK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)	NA|536aa|down_2|NC_007908.1_2770985_2772593_-	TIGR01942, pcnB, poly(A) polymerase	NA|225aa|down_3|NC_007908.1_2772739_2773414_-	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C	NA|229aa|down_4|NC_007908.1_2773428_2774115_-	TIGR03420, DnaA_homol_Hda, DnaA regulatory inactivator Hda	NA|350aa|down_5|NC_007908.1_2774283_2775333_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|394aa|down_6|NC_007908.1_2775356_2776538_+	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily	NA|173aa|down_7|NC_007908.1_2776629_2777148_-	NA	NA|151aa|down_8|NC_007908.1_2777202_2777655_-	pfam12663, DUF3788, Protein of unknown function (DUF3788)	NA|317aa|down_9|NC_007908.1_2777769_2778720_-	COG2852, COG2852, Very-short-patch-repair endonuclease [Replication, recombination,    and repair]
GCF_000013605.1_ASM1360v1	NC_007908	Rhodoferax ferrireducens T118, complete sequence	3	2926646-2926746	3	CRISPRCasFinder	no		PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	ATTGCGGGACAGACCGCAGTTACACACAGTGAAC	34	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,cas6e,csf3gr5,csf2gr7,csf1gr8	NA,NA	NA|556aa|up_9|NC_007908.1_2913230_2914898_+	PRK05380, pyrG, CTP synthetase; Validated	NA|286aa|up_8|NC_007908.1_2914899_2915757_+	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|428aa|up_7|NC_007908.1_2915824_2917108_+	PRK00077, eno, enolase; Provisional	NA|100aa|up_6|NC_007908.1_2917123_2917423_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|330aa|up_5|NC_007908.1_2917439_2918429_-	pfam01430, HSP33, Hsp33 protein	NA|175aa|up_4|NC_007908.1_2918499_2919024_-	COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]	NA|307aa|up_3|NC_007908.1_2919082_2920003_-	PRK00283, xerD, tyrosine recombinase	NA|333aa|up_2|NC_007908.1_2920050_2921049_+	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|941aa|up_1|NC_007908.1_2921106_2923929_-	pfam03993, DUF349, Domain of Unknown Function (DUF349)	NA|268aa|up_0|NC_007908.1_2924374_2925178_+	cd00254, LT-like, lytic transglycosylase(LT)-like domain	NA|150aa|down_0|NC_007908.1_2926771_2927221_+	PRK00464, nrdR, transcriptional repressor NrdR	NA|206aa|down_1|NC_007908.1_2927372_2927990_+	TIGR02523, probable_type-4_fimbrial_biogenesis_protein, type IV pilus modification protein PilV	NA|342aa|down_2|NC_007908.1_2927989_2929015_+	pfam16074, PilW, Type IV Pilus-assembly protein W	NA|209aa|down_3|NC_007908.1_2929011_2929638_+	COG4726, PilX, Tfp pilus assembly protein PilX [Cell motility and secretion / Intracellular trafficking and secretion]	NA|1362aa|down_4|NC_007908.1_2929643_2933729_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|161aa|down_5|NC_007908.1_2933743_2934226_+	COG4968, PilE, Tfp pilus assembly protein PilE [Cell motility and secretion / Intracellular trafficking and secretion]	NA|190aa|down_6|NC_007908.1_2934236_2934806_+	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|370aa|down_7|NC_007908.1_2934866_2935976_+	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|215aa|down_8|NC_007908.1_2936198_2936843_+	PRK09289, PRK09289, riboflavin synthase	NA|375aa|down_9|NC_007908.1_2936899_2938024_+	PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
GCF_000013605.1_ASM1360v1	NC_007908	Rhodoferax ferrireducens T118, complete sequence	4	2944807-2944907	4	CRISPRCasFinder	no		PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	AGCTATGGTCGTGATGGCAACAT	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,cas6e,csf3gr5,csf2gr7,csf1gr8	NA,NA|76aa|down_4|NC_007908.1_2950050_2950278_-	NA|370aa|up_9|NC_007908.1_2934866_2935976_+	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|215aa|up_8|NC_007908.1_2936198_2936843_+	PRK09289, PRK09289, riboflavin synthase	NA|375aa|up_7|NC_007908.1_2936899_2938024_+	PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|158aa|up_6|NC_007908.1_2938016_2938490_+	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|178aa|up_5|NC_007908.1_2938489_2939023_+	PRK00202, nusB, transcription antitermination factor NusB	NA|398aa|up_4|NC_007908.1_2939019_2940213_+	PRK07337, PRK07337, pyridoxal phosphate-dependent aminotransferase	NA|231aa|up_3|NC_007908.1_2940209_2940902_+	TIGR02796, Protein_TolQ, TolQ protein	NA|140aa|up_2|NC_007908.1_2940915_2941335_+	TIGR02801, Protein_TolR, TolR protein	NA|318aa|up_1|NC_007908.1_2941344_2942298_+	pfam13103, TonB_2, TonB C terminal	NA|224aa|up_0|NC_007908.1_2942452_2943124_+	pfam01255, Prenyltransf, Putative undecaprenyl diphosphate synthase	NA|293aa|down_0|NC_007908.1_2946075_2946954_+	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|184aa|down_1|NC_007908.1_2946961_2947513_+	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|648aa|down_2|NC_007908.1_2947641_2949585_+	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|102aa|down_3|NC_007908.1_2949664_2949970_+	pfam04892, VanZ, VanZ like family	NA|76aa|down_4|NC_007908.1_2950050_2950278_-	NA	NA|463aa|down_5|NC_007908.1_2951767_2953156_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|408aa|down_6|NC_007908.1_2953152_2954376_-	PRK08133, PRK08133, O-succinylhomoserine sulfhydrylase; Validated	NA|502aa|down_7|NC_007908.1_2954372_2955878_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|163aa|down_8|NC_007908.1_2955944_2956433_-	pfam02674, Colicin_V, Colicin V production protein	NA|258aa|down_9|NC_007908.1_2956460_2957234_-	pfam05036, SPOR, Sporulation related domain
GCF_000013605.1_ASM1360v1	NC_007908	Rhodoferax ferrireducens T118, complete sequence	5	3722645-3722734	5	CRISPRCasFinder	no		PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	ATACTGCGGCCTGTCCCGCAATGTTTCAG	29	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,cas6e,csf3gr5,csf2gr7,csf1gr8	NA|76aa|up_8|NC_007908.1_3711377_3711605_+,NA|199aa|down_3|NC_007908.1_3725275_3725872_-,NA|211aa|down_7|NC_007908.1_3729719_3730352_+	NA|268aa|up_9|NC_007908.1_3710577_3711381_+	COG4137, COG4137, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|76aa|up_8|NC_007908.1_3711377_3711605_+	NA	NA|585aa|up_7|NC_007908.1_3711605_3713360_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|484aa|up_6|NC_007908.1_3713338_3714790_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|204aa|up_5|NC_007908.1_3714776_3715388_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|982aa|up_4|NC_007908.1_3715564_3718510_+	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha	NA|401aa|up_3|NC_007908.1_3718648_3719851_+	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated	NA|207aa|up_2|NC_007908.1_3720018_3720639_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|314aa|up_1|NC_007908.1_3720721_3721663_-	pfam11906, DUF3426, Protein of unknown function (DUF3426)	NA|302aa|up_0|NC_007908.1_3721697_3722603_-	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|450aa|down_0|NC_007908.1_3722735_3724085_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|148aa|down_1|NC_007908.1_3724103_3724547_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|189aa|down_2|NC_007908.1_3724716_3725283_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|199aa|down_3|NC_007908.1_3725275_3725872_-	NA	NA|467aa|down_4|NC_007908.1_3725927_3727328_+	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|323aa|down_5|NC_007908.1_3727410_3728379_-	PRK01294, PRK01294, lipase secretion chaperone	NA|306aa|down_6|NC_007908.1_3728386_3729304_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|211aa|down_7|NC_007908.1_3729719_3730352_+	NA	NA|586aa|down_8|NC_007908.1_3730462_3732220_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|413aa|down_9|NC_007908.1_3732226_3733465_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]
GCF_000013605.1_ASM1360v1	NC_007908	Rhodoferax ferrireducens T118, complete sequence	6	4365457-4371172	1,6,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Type I-U,Type I-C, Type I-U?	GGATCGCCCGGCATTCATGTCGGGCGCGGATTGAAAC,GGATCGCCCGGCATTCATGTCGGGCGCGGATTGAAAC,GGATCGCCCGGCATTCATGTCGGGCGCGGATTGAAAC	37,37,37	0	0	NA	NA	I-C:I-C:I-C	77,79,79	79	TypeI-C,TypeI-U?,TypeI-U	PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,cas6e,csf3gr5,csf2gr7,csf1gr8	NA,NA	NA|611aa|up_9|NC_007908.1_4353382_4355215_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	WYL|327aa|up_8|NC_007908.1_4355280_4356261_+	pfam13280, WYL, WYL domain	cas3|829aa|up_7|NC_007908.1_4356336_4358823_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|238aa|up_6|NC_007908.1_4358815_4359529_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|637aa|up_5|NC_007908.1_4359530_4361441_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|295aa|up_4|NC_007908.1_4361456_4362341_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	NA|285aa|up_3|NC_007908.1_4362372_4363227_+	smart01040, Bro-N, BRO family, N-terminal domain	cas4|213aa|up_2|NC_007908.1_4363251_4363890_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|343aa|up_1|NC_007908.1_4363902_4364931_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NC_007908.1_4364940_4365231_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|133aa|down_0|NC_007908.1_4371273_4371672_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|235aa|down_1|NC_007908.1_4371713_4372418_-	pfam03886, ABC_trans_aux, ABC-type transport auxiliary lipoprotein component	NA|322aa|down_2|NC_007908.1_4372414_4373380_-	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|down_3|NC_007908.1_4373391_4374207_-	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents	NA|377aa|down_4|NC_007908.1_4374203_4375334_-	pfam02405, MlaE, Permease MlaE	NA|570aa|down_5|NC_007908.1_4375505_4377215_+	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|253aa|down_6|NC_007908.1_4377470_4378229_+	PRK10621, PRK10621, hypothetical protein; Provisional	NA|674aa|down_7|NC_007908.1_4378251_4380273_-	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|177aa|down_8|NC_007908.1_4380276_4380807_-	COG2891, MreD, Cell shape-determining protein [Cell envelope biogenesis, outer membrane]	NA|307aa|down_9|NC_007908.1_4380803_4381724_-	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional
GCF_000013605.1_ASM1360v1	NC_007901	Rhodoferax ferrireducens T118 plasmid unnamed1, complete sequence	1	109569-111086	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,csf3gr5,csf2gr7,csf1gr8,DinG	cas2,cas1,cas6e,csf3gr5,csf2gr7,csf1gr8,DinG	Type IV-A	CCTTCAATCCCCGCGCAACGCGGGGCGCAC,CCTTCAATCCCCGCGCAACGCGGGGCGCAC,GTGCGCCCCGC------GTTGCGCGGGGATTGAAG	30,30,35	0	0	NA	NA	NA:NA:NA	24,24,24	24	TypeIV-A	PD-DExK,WYL,csa3,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,cas6e,csf3gr5,csf2gr7,csf1gr8	NA|414aa|up_7|NC_007901.1_102456_103698_-,NA|56aa|up_6|NC_007901.1_103988_104156_+,NA|160aa|up_5|NC_007901.1_104272_104752_+,NA|122aa|up_2|NC_007901.1_106925_107291_+,NA|179aa|down_5|NC_007901.1_114821_115358_+,NA|204aa|down_8|NC_007901.1_118657_119269_+	NA|228aa|up_9|NC_007901.1_101056_101740_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|212aa|up_8|NC_007901.1_101800_102436_-	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain	NA|414aa|up_7|NC_007901.1_102456_103698_-	NA	NA|56aa|up_6|NC_007901.1_103988_104156_+	NA	NA|160aa|up_5|NC_007901.1_104272_104752_+	NA	NA|433aa|up_4|NC_007901.1_105087_106386_-	cd01700, PolY_Pol_V_umuC, umuC subunit of DNA Polymerase V	NA|147aa|up_3|NC_007901.1_106392_106833_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|122aa|up_2|NC_007901.1_106925_107291_+	NA	NA|216aa|up_1|NC_007901.1_107295_107943_+	pfam02586, SRAP, SOS response associated peptidase (SRAP)	NA|358aa|up_0|NC_007901.1_108459_109533_+	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	cas2|92aa|down_0|NC_007901.1_111107_111383_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|274aa|down_1|NC_007901.1_111366_112188_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|169aa|down_2|NC_007901.1_112279_112786_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	csf3gr5|227aa|down_3|NC_007901.1_112809_113490_-	TIGR03116, cas5_csf3, CRISPR type IV/AFERR-associated protein Csf3	csf2gr7|377aa|down_4|NC_007901.1_113491_114622_-	TIGR03115, cas7_csf2, CRISPR type IV/AFERR-associated protein Csf2	NA|179aa|down_5|NC_007901.1_114821_115358_+	NA	csf1gr8|271aa|down_6|NC_007901.1_115369_116182_+	TIGR03114, cas8u_csf1, CRISPR type AFERR-associated protein Csf1	DinG|814aa|down_7|NC_007901.1_116183_118625_+	TIGR03117, cas_csf4, CRISPR type AFERR-associated DEAD/DEAH-box helicase Csf4	NA|204aa|down_8|NC_007901.1_118657_119269_+	NA	NA|498aa|down_9|NC_007901.1_119342_120836_-	pfam01051, Rep_3, Initiator Replication protein
