The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_007776	Synechococcus sp. JA-2-3B'a(2-13), complete sequence	3046682	3371	66604	3046682	tRNA,protease,transposase	Bacillus_virus(21.43%)	45	NA	NA
WP_011431677.1|3371_5294_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	G9E4U6	Ostreococcus_lucimarinus_virus	51.5	1.8e-125
WP_011431678.1|5430_6306_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_011431680.1|6532_7120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049749540.1|7142_9668_-	DNA topoisomerase 4 subunit A	NA	A0A172JHV7	Bacillus_phage	28.2	3.0e-75
WP_011431682.1|10812_12723_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.0	2.4e-53
WP_148202783.1|12863_13865_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011431684.1|14051_14774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011431685.1|15044_16448_+	phosphoglucomutase/phosphomannomutase family protein	NA	NA	NA	NA	NA
WP_011431687.1|17326_17938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148202784.1|18416_19631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431689.1|19690_21247_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_083757672.1|21293_22379_-|transposase	transposase	transposase	A0A1V0SAM8	Catovirus	34.3	2.3e-24
WP_011431691.1|22428_23022_-|transposase	IS607 family transposase	transposase	Q331V0	Clostridium_botulinum_C_phage	37.9	2.4e-36
WP_011431692.1|23138_23720_-	Uma2 family endonuclease	NA	NA	NA	NA	NA
WP_011431693.1|23827_26062_-	photosystem I core protein PsaB	NA	A0A0K0KW31	Prochlorococcus_phage	71.2	0.0e+00
WP_011431694.1|26083_28351_-	photosystem I core protein PsaA	NA	A0A0K0KVP2	Prochlorococcus_phage	66.3	3.0e-308
WP_011431695.1|28678_30397_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_011431696.1|30460_31567_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	39.1	2.4e-29
WP_011431698.1|32082_33315_+|transposase	transposase	transposase	A0A1V0SAM8	Catovirus	32.4	5.8e-24
WP_011431699.1|33374_34634_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011431700.1|34637_37646_-	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	30.7	2.9e-24
WP_011431701.1|37664_38306_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011431702.1|38531_39323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011431703.1|39537_40023_+	ureidoglycolate lyase	NA	NA	NA	NA	NA
WP_187147246.1|40596_40743_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071818131.1|40759_41899_+	CAP domain-containing protein	NA	NA	NA	NA	NA
WP_011431706.1|42091_43639_+	ferredoxin--nitrite reductase	NA	NA	NA	NA	NA
WP_011431707.1|43700_45023_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011431708.1|45168_46128_+	nitrate ABC transporter permease	NA	NA	NA	NA	NA
WP_011431709.1|46200_48192_+	ABC transporter substrate-binding protein	NA	G3M9Y6	Bacillus_virus	34.9	2.5e-29
WP_011431710.1|48230_49073_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	36.6	4.4e-31
WP_041436931.1|49168_49687_+	Uma2 family endonuclease	NA	NA	NA	NA	NA
WP_011431712.1|49773_51909_+	nitrate reductase	NA	NA	NA	NA	NA
WP_011431713.1|51933_52434_+	nitrate reductase associated protein	NA	NA	NA	NA	NA
WP_011431714.1|52430_53648_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	NA	NA	NA	NA
WP_011431715.1|54108_55404_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_041436937.1|55506_56622_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_011431717.1|56765_58055_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.9	1.8e-20
WP_011431718.1|58143_59217_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_011431719.1|59246_61082_-	ribonuclease J	NA	NA	NA	NA	NA
WP_011431720.1|61301_62222_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_011431721.1|62497_63124_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_011431722.1|63175_64207_-	anthranilate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011431723.1|64390_65770_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_148202668.1|65861_66604_-|transposase	IS5-like element ISSoc13 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	40.0	4.9e-18
>prophage 2
NC_007776	Synechococcus sp. JA-2-3B'a(2-13), complete sequence	3046682	78034	126004	3046682	tRNA,protease,transposase	Thermus_phage(12.5%)	44	NA	NA
WP_011431738.1|78034_79021_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_011431739.1|79073_79838_-|protease	proteasome-type protease	protease	NA	NA	NA	NA
WP_041436061.1|79886_81296_-	DUF697 domain-containing protein	NA	NA	NA	NA	NA
WP_011431741.1|81527_81812_+	DUF427 domain-containing protein	NA	NA	NA	NA	NA
WP_011431742.1|81870_82455_+	TolB family protein	NA	NA	NA	NA	NA
WP_187147271.1|82510_83689_+	LL-diaminopimelate aminotransferase	NA	NA	NA	NA	NA
WP_011431744.1|83849_84548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431745.1|84795_86109_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
WP_011431746.1|86287_87061_+	helix-turn-helix domain-containing protein	NA	A0A068A1P5	Thermus_phage	35.3	4.4e-30
WP_011431747.1|87266_87530_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_187147248.1|87917_90329_+	family 10 glycosylhydrolase	NA	NA	NA	NA	NA
WP_011431749.1|90395_90809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041436950.1|90956_91556_+	pseudouridine synthase	NA	NA	NA	NA	NA
WP_011431751.1|91834_93184_-	adenylosuccinate synthase	NA	A0A0B5J049	Pandoravirus	31.4	7.9e-51
WP_011431752.1|93395_94895_-	S41 family peptidase	NA	NA	NA	NA	NA
WP_011431753.1|95175_96330_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1P8DJA0	Virus_Rctr71	33.8	5.8e-42
WP_011431754.1|96347_98018_-	trigger factor	NA	NA	NA	NA	NA
WP_011431755.1|98089_98473_-	LapA family protein	NA	NA	NA	NA	NA
WP_041436952.1|98557_99577_-	c-type cytochrome biogenesis protein CcsB	NA	NA	NA	NA	NA
WP_187147249.1|99835_101248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431759.1|102811_104029_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	NA	NA	NA	NA
WP_011431760.1|104063_105293_+	exodeoxyribonuclease VII large subunit	NA	M1NLU2	Moumouvirus	35.4	7.0e-30
WP_011431761.1|105273_105510_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_011431762.1|105602_106484_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	35.9	2.0e-26
WP_187147250.1|107026_107500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011431764.1|107840_108458_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_049749542.1|108514_109789_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011431766.1|110016_110670_-	DUF3386 domain-containing protein	NA	NA	NA	NA	NA
WP_011431767.1|110943_112338_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_011431768.1|112531_114667_+	transglycosylase SLT domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	37.1	1.9e-14
WP_041436958.1|114903_115398_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
WP_011431770.1|115466_115760_-	DUF3082 domain-containing protein	NA	NA	NA	NA	NA
WP_011431771.1|115839_116520_+	J domain-containing protein	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	35.8	4.3e-05
WP_011431772.1|116511_117381_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A1V0SCZ1	Indivirus	29.2	1.2e-12
WP_041436960.1|117451_118276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011431774.1|118334_119306_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_011431775.1|119663_119909_+	photosystem I reaction center subunit PsaK	NA	NA	NA	NA	NA
WP_041436063.1|120030_120168_+	photosystem II reaction center protein K	NA	NA	NA	NA	NA
WP_011431777.1|120506_121046_-	DUF3611 family protein	NA	NA	NA	NA	NA
WP_148202787.1|121121_121526_-	DUF4168 domain-containing protein	NA	NA	NA	NA	NA
WP_011431779.1|121854_122913_+	magnesium chelatase ATPase subunit I	NA	NA	NA	NA	NA
WP_011431780.1|122952_123651_-	cofactor assembly of complex C subunit B	NA	NA	NA	NA	NA
WP_011431781.1|124059_124593_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_011431783.1|125416_126004_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 3
NC_007776	Synechococcus sp. JA-2-3B'a(2-13), complete sequence	3046682	210424	270751	3046682	protease,transposase	Paenibacillus_phage(18.18%)	53	NA	NA
WP_076611515.1|210424_211166_+|transposase	IS5-like element ISSoc13 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	44.6	1.8e-20
WP_011431870.1|211181_211715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011431871.1|212011_212446_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_011431872.1|212622_212853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431873.1|212975_214439_+	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	31.8	6.0e-60
WP_076611515.1|214453_215196_-|transposase	IS5-like element ISSoc13 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	44.6	1.8e-20
WP_011431874.1|216391_217609_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_011431875.1|218004_218367_+	cation:proton antiporter subunit C	NA	NA	NA	NA	NA
WP_011431876.1|218359_219832_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_041436089.1|219815_220220_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_011431878.1|220216_220468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431879.1|220487_220769_+	monovalent cation/H(+) antiporter subunit G	NA	NA	NA	NA	NA
WP_011431880.1|220778_221300_+	DUF4040 domain-containing protein	NA	NA	NA	NA	NA
WP_011431881.1|221296_221977_+	Na(+)/H(+) antiporter subunit B	NA	NA	NA	NA	NA
WP_071818136.1|222395_222629_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_011431882.1|222908_226157_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_011431883.1|226513_227569_+	photosystem II q(b) protein	NA	A0A127KM98	Cyanophage	72.2	1.4e-143
WP_011431884.1|227575_229426_-	aspartate kinase	NA	NA	NA	NA	NA
WP_011431885.1|229470_231006_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_041436092.1|231284_231527_-	DUF751 family protein	NA	NA	NA	NA	NA
WP_011431888.1|232120_232591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431889.1|232757_233405_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_011431891.1|233531_234650_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_011431892.1|234764_235391_+	cobalt-precorrin-8X methylmutase	NA	NA	NA	NA	NA
WP_011431893.1|235397_236291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431894.1|236291_237551_+	bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase	NA	NA	NA	NA	NA
WP_011431895.1|237597_238200_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_011431896.1|238503_239223_+	DNA/RNA nuclease SfsA	NA	F2Y2I1	Organic_Lake_phycodnavirus	29.7	1.2e-05
WP_011431897.1|239320_240580_+	GTP cyclohydrolase II	NA	NA	NA	NA	NA
WP_011431898.1|240592_241378_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_011431899.1|241642_242836_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	25.4	4.8e-07
WP_148202670.1|242790_243276_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_011431901.1|243544_244477_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011431902.1|244558_245227_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_011431903.1|245241_246069_-	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA	NA
WP_011431904.1|246058_246871_-	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA	NA
WP_011431905.1|246877_247921_-	TOBE-like domain-containing protein	NA	G3M9Y6	Bacillus_virus	34.8	7.3e-28
WP_011431906.1|248095_249100_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011431907.1|249358_252145_-	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011431908.1|252155_254786_-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_011431909.1|254878_255289_-	OsmC family protein	NA	NA	NA	NA	NA
WP_011431910.1|255471_256221_-	pyruvate formate lyase-activating protein	NA	NA	NA	NA	NA
WP_011431911.1|256446_256857_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_011431912.1|256938_259245_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	46.2	1.4e-185
WP_011431913.1|259658_260738_+	VOC family protein	NA	NA	NA	NA	NA
WP_011431914.1|260888_262250_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	57.5	2.4e-124
WP_011431916.1|264505_265258_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.6	8.7e-39
WP_011431917.1|265342_267475_+	TIGR00300 family protein	NA	NA	NA	NA	NA
WP_011431919.1|267543_268326_+	SAM-dependent chlorinase/fluorinase	NA	NA	NA	NA	NA
WP_011431920.1|268364_268817_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_011431923.1|269104_269263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431924.1|269265_269412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011431925.1|269596_270751_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1P8DJA0	Virus_Rctr71	33.5	2.6e-42
>prophage 4
NC_007776	Synechococcus sp. JA-2-3B'a(2-13), complete sequence	3046682	605550	639850	3046682	protease,transposase	Lactobacillus_virus(25.0%)	29	NA	NA
WP_011432246.1|605550_606744_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	22.6	2.1e-07
WP_011432247.1|606715_608173_-	TIGR03985 family CRISPR-associated protein	NA	NA	NA	NA	NA
WP_011432248.1|608338_609307_+	CRISPR-associated protein Csx3	NA	NA	NA	NA	NA
WP_011432249.1|609410_610202_+	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA	NA
WP_011432250.1|610277_611165_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	36.8	8.4e-33
WP_011432251.1|611236_613234_-	ABC transporter substrate-binding protein	NA	G3M9Y6	Bacillus_virus	38.8	2.8e-28
WP_011432252.1|613302_614130_-	nitrate ABC transporter permease	NA	NA	NA	NA	NA
WP_011432253.1|614651_615956_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011432254.1|616166_617264_+	tocopherol cyclase family protein	NA	NA	NA	NA	NA
WP_011432255.1|617631_620106_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.9	9.2e-130
WP_011432256.1|620233_620869_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	42.9	4.0e-29
WP_041436231.1|620886_621162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049749557.1|621199_621535_+	Uma2 family endonuclease	NA	NA	NA	NA	NA
WP_011432257.1|621482_622094_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	45.8	2.0e-38
WP_011432258.1|622201_622504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011432259.1|622508_623096_-	chromophore lyase CpcT/CpeT	NA	NA	NA	NA	NA
WP_187147272.1|623353_624499_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_011432264.1|626314_626986_+	DUF1614 domain-containing protein	NA	NA	NA	NA	NA
WP_011432265.1|626982_629181_-	caspase family protein	NA	NA	NA	NA	NA
WP_011432266.1|629484_630702_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	25.9	5.7e-08
WP_041436236.1|630673_631042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041436238.1|631336_633211_+	hypothetical protein	NA	H8ZJ56	Ostreococcus_tauri_virus	30.9	7.2e-50
WP_011432270.1|633207_633606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011432271.1|634115_635006_+	prephenate/arogenate dehydrogenase	NA	NA	NA	NA	NA
WP_011432272.1|635074_635824_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_011432273.1|635935_637345_+	cytochrome c biogenesis protein	NA	NA	NA	NA	NA
WP_011432274.1|637686_637947_+	ferredoxin-thioredoxin reductase variable chain	NA	NA	NA	NA	NA
WP_011432275.1|637943_638417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011432277.1|638632_639850_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	NA	NA	NA	NA
