assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000012985.1_ASM1298v1	NC_007645	Hahella chejuensis KCTC 2396, complete sequence	1	2010725-2010873	1	CRISPRCasFinder	no		csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	CGAGTACAACGAACAGGGCCTGC	23	2	2	2010748-2010787|2010811-2010850	NC_007645.1_3914857-3914818|NC_007645.1_3914794-3914755	NA	2	2	Orphan	csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	NA|233aa|up_9|NC_007645.1_1999144_1999843_+,NA|180aa|up_2|NC_007645.1_2006485_2007025_+,NA|136aa|up_1|NC_007645.1_2006995_2007403_-,NA|152aa|down_0|NC_007645.1_2013286_2013742_+,NA|172aa|down_1|NC_007645.1_2013745_2014261_+,NA|185aa|down_2|NC_007645.1_2014410_2014965_+,NA|203aa|down_4|NC_007645.1_2015431_2016040_+	NA|233aa|up_9|NC_007645.1_1999144_1999843_+	NA	NA|196aa|up_8|NC_007645.1_1999916_2000504_+	pfam13023, HD_3, HD domain	NA|101aa|up_7|NC_007645.1_2000565_2000868_-	smart00886, Dabb, Stress responsive A/B Barrel Domain	NA|329aa|up_6|NC_007645.1_2001025_2002012_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|917aa|up_5|NC_007645.1_2002008_2004759_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|377aa|up_4|NC_007645.1_2004760_2005891_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|160aa|up_3|NC_007645.1_2005921_2006401_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|180aa|up_2|NC_007645.1_2006485_2007025_+	NA	NA|136aa|up_1|NC_007645.1_2006995_2007403_-	NA	NA|159aa|up_0|NC_007645.1_2007932_2008409_+	cd02900, Macro_Appr_pase, macrodomain, Appr-1"-pase family	NA|152aa|down_0|NC_007645.1_2013286_2013742_+	NA	NA|172aa|down_1|NC_007645.1_2013745_2014261_+	NA	NA|185aa|down_2|NC_007645.1_2014410_2014965_+	NA	NA|111aa|down_3|NC_007645.1_2015102_2015435_+	pfam02893, GRAM, GRAM domain	NA|203aa|down_4|NC_007645.1_2015431_2016040_+	NA	NA|251aa|down_5|NC_007645.1_2016056_2016809_+	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|260aa|down_6|NC_007645.1_2016855_2017635_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|194aa|down_7|NC_007645.1_2017995_2018577_+	cd01338, MDH_choloroplast_like, Chloroplast-like malate dehydrogenases	NA|279aa|down_8|NC_007645.1_2018640_2019477_-	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|371aa|down_9|NC_007645.1_2019793_2020906_+	pfam04389, Peptidase_M28, Peptidase family M28
GCF_000012985.1_ASM1298v1	NC_007645	Hahella chejuensis KCTC 2396, complete sequence	2	2905515-2907663	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Type I-C,Type I-U, Type I-U?	GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC,GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC,GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	32,32,32	32	TypeI-C,TypeI-U?,TypeI-U	csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	NA,NA|256aa|down_0|NC_007645.1_2907997_2908765_+,NA|156aa|down_1|NC_007645.1_2908992_2909460_+,NA|77aa|down_9|NC_007645.1_2921592_2921823_-	NA|320aa|up_9|NC_007645.1_2891969_2892929_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|395aa|up_8|NC_007645.1_2893001_2894186_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|406aa|up_7|NC_007645.1_2894322_2895540_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|289aa|up_6|NC_007645.1_2895762_2896629_+	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|417aa|up_5|NC_007645.1_2896843_2898094_+	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold	NA|369aa|up_4|NC_007645.1_2898109_2899216_-	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|559aa|up_3|NC_007645.1_2899326_2901003_-	COG4615, PvdE, ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]	NA|300aa|up_2|NC_007645.1_2901483_2902383_+	pfam13621, Cupin_8, Cupin-like domain	NA|305aa|up_1|NC_007645.1_2902494_2903409_+	pfam13621, Cupin_8, Cupin-like domain	NA|595aa|up_0|NC_007645.1_2903430_2905215_+	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]	NA|256aa|down_0|NC_007645.1_2907997_2908765_+	NA	NA|156aa|down_1|NC_007645.1_2908992_2909460_+	NA	cas3|744aa|down_2|NC_007645.1_2909786_2912018_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|223aa|down_3|NC_007645.1_2912056_2912725_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|593aa|down_4|NC_007645.1_2912721_2914500_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|298aa|down_5|NC_007645.1_2914496_2915390_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|205aa|down_6|NC_007645.1_2915399_2916014_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|339aa|down_7|NC_007645.1_2916010_2917027_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|98aa|down_8|NC_007645.1_2917031_2917325_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|77aa|down_9|NC_007645.1_2921592_2921823_-	NA
GCF_000012985.1_ASM1298v1	NC_007645	Hahella chejuensis KCTC 2396, complete sequence	3	2917501-2921171	3,2	CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Type I-C,Type I-U, Type I-U?	GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC,GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	32,32	0	0	NA	NA	I-C:I-C	55,55	55	TypeI-C,TypeI-U?,TypeI-U	csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	NA|256aa|up_8|NC_007645.1_2907997_2908765_+,NA|156aa|up_7|NC_007645.1_2908992_2909460_+,NA|77aa|down_0|NC_007645.1_2921592_2921823_-,NA|247aa|down_5|NC_007645.1_2925622_2926363_-,NA|122aa|down_6|NC_007645.1_2926633_2926999_+,NA|181aa|down_7|NC_007645.1_2927028_2927571_+,NA|93aa|down_8|NC_007645.1_2927707_2927986_+,NA|176aa|down_9|NC_007645.1_2928050_2928578_+	NA|595aa|up_9|NC_007645.1_2903430_2905215_+	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]	NA|256aa|up_8|NC_007645.1_2907997_2908765_+	NA	NA|156aa|up_7|NC_007645.1_2908992_2909460_+	NA	cas3|744aa|up_6|NC_007645.1_2909786_2912018_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|223aa|up_5|NC_007645.1_2912056_2912725_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|593aa|up_4|NC_007645.1_2912721_2914500_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|298aa|up_3|NC_007645.1_2914496_2915390_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|205aa|up_2|NC_007645.1_2915399_2916014_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|339aa|up_1|NC_007645.1_2916010_2917027_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|98aa|up_0|NC_007645.1_2917031_2917325_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|77aa|down_0|NC_007645.1_2921592_2921823_-	NA	NA|249aa|down_1|NC_007645.1_2922189_2922936_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|160aa|down_2|NC_007645.1_2922932_2923412_-	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|246aa|down_3|NC_007645.1_2923452_2924190_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|404aa|down_4|NC_007645.1_2924317_2925529_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|247aa|down_5|NC_007645.1_2925622_2926363_-	NA	NA|122aa|down_6|NC_007645.1_2926633_2926999_+	NA	NA|181aa|down_7|NC_007645.1_2927028_2927571_+	NA	NA|93aa|down_8|NC_007645.1_2927707_2927986_+	NA	NA|176aa|down_9|NC_007645.1_2928050_2928578_+	NA
GCF_000012985.1_ASM1298v1	NC_007645	Hahella chejuensis KCTC 2396, complete sequence	4	3275972-3276050	4	CRISPRCasFinder	no		csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	CCTTCGACAGGCTCAGGGCGAAC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	NA|324aa|up_9|NC_007645.1_3263954_3264926_+,NA|100aa|up_8|NC_007645.1_3265221_3265521_-,NA|541aa|up_4|NC_007645.1_3269447_3271070_-,NA|110aa|up_3|NC_007645.1_3271430_3271760_+,NA|148aa|down_0|NC_007645.1_3276667_3277111_-,NA|191aa|down_1|NC_007645.1_3277107_3277680_-,NA|167aa|down_2|NC_007645.1_3277911_3278412_+,NA|92aa|down_3|NC_007645.1_3278843_3279119_+	NA|324aa|up_9|NC_007645.1_3263954_3264926_+	NA	NA|100aa|up_8|NC_007645.1_3265221_3265521_-	NA	NA|488aa|up_7|NC_007645.1_3265575_3267039_-	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators	NA|258aa|up_6|NC_007645.1_3267147_3267921_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|247aa|up_5|NC_007645.1_3268185_3268926_-	pfam07589, VPEP, PEP-CTERM motif	NA|541aa|up_4|NC_007645.1_3269447_3271070_-	NA	NA|110aa|up_3|NC_007645.1_3271430_3271760_+	NA	NA|573aa|up_2|NC_007645.1_3272214_3273933_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|268aa|up_1|NC_007645.1_3274025_3274829_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|306aa|up_0|NC_007645.1_3275034_3275952_+	cd06448, L-Ser-dehyd, Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia	NA|148aa|down_0|NC_007645.1_3276667_3277111_-	NA	NA|191aa|down_1|NC_007645.1_3277107_3277680_-	NA	NA|167aa|down_2|NC_007645.1_3277911_3278412_+	NA	NA|92aa|down_3|NC_007645.1_3278843_3279119_+	NA	NA|527aa|down_4|NC_007645.1_3279582_3281163_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|177aa|down_5|NC_007645.1_3281544_3282075_-	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|176aa|down_6|NC_007645.1_3282093_3282621_-	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|172aa|down_7|NC_007645.1_3282642_3283158_-	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|274aa|down_8|NC_007645.1_3283547_3284369_+	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|2225aa|down_9|NC_007645.1_3284432_3291107_+	pfam14252, DUF4347, Domain of unknown function (DUF4347)
GCF_000012985.1_ASM1298v1	NC_007645	Hahella chejuensis KCTC 2396, complete sequence	5	7147051-7147200	2	PILER-CR	no		csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	TACAAAAAAGTATCATACTTAAT	23	0	0	NA	NA	NA	2	2	Orphan	csa3,RT,WYL,Cas9_archaeal,DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	NA|138aa|up_5|NC_007645.1_7136129_7136543_+,NA|214aa|up_2|NC_007645.1_7145294_7145936_-,NA|140aa|up_1|NC_007645.1_7146097_7146517_-,NA|109aa|up_0|NC_007645.1_7146606_7146933_+,NA|234aa|down_0|NC_007645.1_7148279_7148981_-,NA|485aa|down_2|NC_007645.1_7153174_7154629_-,NA|61aa|down_4|NC_007645.1_7159861_7160044_-,NA|146aa|down_5|NC_007645.1_7160265_7160703_-	NA|295aa|up_9|NC_007645.1_7130762_7131647_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|772aa|up_8|NC_007645.1_7131643_7133959_-	pfam02517, Abi, CAAX protease self-immunity	NA|361aa|up_7|NC_007645.1_7134030_7135113_-	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor	NA|302aa|up_6|NC_007645.1_7135213_7136119_+	pfam02517, Abi, CAAX protease self-immunity	NA|138aa|up_5|NC_007645.1_7136129_7136543_+	NA	NA|2041aa|up_4|NC_007645.1_7136955_7143078_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|728aa|up_3|NC_007645.1_7143087_7145271_+	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C	NA|214aa|up_2|NC_007645.1_7145294_7145936_-	NA	NA|140aa|up_1|NC_007645.1_7146097_7146517_-	NA	NA|109aa|up_0|NC_007645.1_7146606_7146933_+	NA	NA|234aa|down_0|NC_007645.1_7148279_7148981_-	NA	NA|1001aa|down_1|NC_007645.1_7148984_7151987_-	NF033455, BREX_6_MTaseX, BREX-6 system adenine-specific DNA-methyltransferase PglX	NA|485aa|down_2|NC_007645.1_7153174_7154629_-	NA	NA|1655aa|down_3|NC_007645.1_7154625_7159590_-	pfam13087, AAA_12, AAA domain	NA|61aa|down_4|NC_007645.1_7159861_7160044_-	NA	NA|146aa|down_5|NC_007645.1_7160265_7160703_-	NA	NA|367aa|down_6|NC_007645.1_7161627_7162728_+	TIGR03233, DNA_S_dndB, DNA sulfur modification protein DndB	NA|528aa|down_7|NC_007645.1_7162724_7164308_+	PRK06850, PRK06850, hypothetical protein; Provisional	NA|664aa|down_8|NC_007645.1_7164307_7166299_+	TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD	NA|112aa|down_9|NC_007645.1_7166350_7166686_+	TIGR03184, putative_phosphoribosylaminoimidazole, DNA sulfur modification protein DndE
