assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	1	228709-229022	1	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	GAAGCCCAGCTCGCGCATCTGCTTCACGAAGTCGGGCGTGACGCGGTGGATGC	53	0	0	NA	NA	NA	3	3	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|140aa|up_4|NC_008095.1_223255_223675_-,NA|240aa|up_3|NC_008095.1_223687_224407_-,NA|134aa|up_0|NC_008095.1_228065_228467_-,NA|117aa|down_3|NC_008095.1_233466_233817_+,NA|368aa|down_4|NC_008095.1_233825_234929_-	NA|204aa|up_9|NC_008095.1_215874_216486_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|235aa|up_8|NC_008095.1_216503_217208_-	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|429aa|up_7|NC_008095.1_217449_218736_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|424aa|up_6|NC_008095.1_218765_220037_-	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	NA|901aa|up_5|NC_008095.1_220188_222891_-	pfam05170, AsmA, AsmA family	NA|140aa|up_4|NC_008095.1_223255_223675_-	NA	NA|240aa|up_3|NC_008095.1_223687_224407_-	NA	NA|541aa|up_2|NC_008095.1_224503_226126_-	TIGR04534, hypothetical_protein, ELWxxDGT repeat	NA|644aa|up_1|NC_008095.1_226125_228057_+	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)	NA|134aa|up_0|NC_008095.1_228065_228467_-	NA	NA|711aa|down_0|NC_008095.1_229699_231832_-	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|132aa|down_1|NC_008095.1_231828_232224_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|272aa|down_2|NC_008095.1_232373_233189_-	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily	NA|117aa|down_3|NC_008095.1_233466_233817_+	NA	NA|368aa|down_4|NC_008095.1_233825_234929_-	NA	NA|479aa|down_5|NC_008095.1_234947_236384_-	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|953aa|down_6|NC_008095.1_236497_239356_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|636aa|down_7|NC_008095.1_239405_241313_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|849aa|down_8|NC_008095.1_241317_243864_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|172aa|down_9|NC_008095.1_243904_244420_-	pfam01272, GreA_GreB, Transcription elongation factor, GreA/GreB, C-term
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	2	1130058-1130155	2	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	CGGTGGTCATCGCGGTGGCGGTG	23	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|73aa|up_4|NC_008095.1_1123667_1123886_+,NA|294aa|down_2|NC_008095.1_1133121_1134003_+,NA|105aa|down_6|NC_008095.1_1139770_1140085_-	NA|224aa|up_9|NC_008095.1_1116436_1117108_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|331aa|up_8|NC_008095.1_1117100_1118093_-	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|377aa|up_7|NC_008095.1_1118428_1119559_-	PRK07671, PRK07671, bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA|367aa|up_6|NC_008095.1_1119497_1120598_-	PRK08247, PRK08247, methionine biosynthesis PLP-dependent protein	NA|832aa|up_5|NC_008095.1_1120622_1123118_-	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional	NA|73aa|up_4|NC_008095.1_1123667_1123886_+	NA	NA|308aa|up_3|NC_008095.1_1124052_1124976_+	cd10451, GIY-YIG_LuxR_like, GIY-YIG domain of LuxR and ArsR family transcriptional regulators, and uncharacterized hypothetical proteins found in bacteria	NA|312aa|up_2|NC_008095.1_1125012_1125948_+	TIGR04052, hypothetical_protein_MettrDRAFT_3899, AZL_007920/MXAN_0976 family protein	NA|380aa|up_1|NC_008095.1_1125960_1127100_+	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family	NA|471aa|up_0|NC_008095.1_1127198_1128611_-	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	NA|138aa|down_0|NC_008095.1_1131377_1131791_+	cd08026, DUF326, Cysteine-rich 4 helical bundle widely conserved in bacteria	NA|364aa|down_1|NC_008095.1_1131878_1132970_+	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only]	NA|294aa|down_2|NC_008095.1_1133121_1134003_+	NA	NA|1053aa|down_3|NC_008095.1_1134063_1137222_-	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|400aa|down_4|NC_008095.1_1137202_1138402_-	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion	NA|421aa|down_5|NC_008095.1_1138398_1139661_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|105aa|down_6|NC_008095.1_1139770_1140085_-	NA	NA|282aa|down_7|NC_008095.1_1140174_1141020_-	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|1067aa|down_8|NC_008095.1_1141143_1144344_-	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|567aa|down_9|NC_008095.1_1144330_1146031_-	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	3	1426870-1426974	3	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	CGAGGACGAGCAGAAGAGCGAGCCCGACGA	30	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|177aa|up_9|NC_008095.1_1411317_1411848_-,NA|211aa|up_8|NC_008095.1_1411948_1412581_-,NA|173aa|up_6|NC_008095.1_1415493_1416012_+,NA|138aa|down_1|NC_008095.1_1428158_1428572_+,NA|219aa|down_2|NC_008095.1_1428664_1429321_+,NA|108aa|down_3|NC_008095.1_1429320_1429644_+,NA|140aa|down_4|NC_008095.1_1429643_1430063_+,NA|139aa|down_5|NC_008095.1_1430099_1430516_+,NA|221aa|down_7|NC_008095.1_1430952_1431615_+,NA|118aa|down_8|NC_008095.1_1431646_1432000_+,NA|783aa|down_9|NC_008095.1_1432251_1434600_+	NA|177aa|up_9|NC_008095.1_1411317_1411848_-	NA	NA|211aa|up_8|NC_008095.1_1411948_1412581_-	NA	NA|677aa|up_7|NC_008095.1_1413198_1415229_-	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases	NA|173aa|up_6|NC_008095.1_1415493_1416012_+	NA	NA|449aa|up_5|NC_008095.1_1416093_1417440_-	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily	NA|773aa|up_4|NC_008095.1_1418713_1421032_-	COG5545, COG5545, Predicted P-loop ATPase and inactivated derivatives [General function prediction only]	NA|238aa|up_3|NC_008095.1_1421763_1422477_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|159aa|up_2|NC_008095.1_1422992_1423469_+	pfam13613, HTH_Tnp_4, Helix-turn-helix of DDE superfamily endonuclease	NA|472aa|up_1|NC_008095.1_1423461_1424877_+	COG5323, COG5323, Uncharacterized conserved protein [Function unknown]	NA|443aa|up_0|NC_008095.1_1424903_1426232_+	pfam04860, Phage_portal, Phage portal protein	NA|363aa|down_0|NC_008095.1_1427058_1428147_+	pfam05065, Phage_capsid, Phage capsid family	NA|138aa|down_1|NC_008095.1_1428158_1428572_+	NA	NA|219aa|down_2|NC_008095.1_1428664_1429321_+	NA	NA|108aa|down_3|NC_008095.1_1429320_1429644_+	NA	NA|140aa|down_4|NC_008095.1_1429643_1430063_+	NA	NA|139aa|down_5|NC_008095.1_1430099_1430516_+	NA	NA|142aa|down_6|NC_008095.1_1430527_1430953_+	pfam06199, Phage_tail_2, Phage tail tube protein	NA|221aa|down_7|NC_008095.1_1430952_1431615_+	NA	NA|118aa|down_8|NC_008095.1_1431646_1432000_+	NA	NA|783aa|down_9|NC_008095.1_1432251_1434600_+	NA
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	4	2222340-2222415	4	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	TCCTGGCGCCGTGGCGTGACACGT	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|142aa|up_8|NC_008095.1_2214187_2214613_+,NA|146aa|up_4|NC_008095.1_2217344_2217782_+,NA|422aa|down_0|NC_008095.1_2222789_2224055_+,NA|152aa|down_2|NC_008095.1_2225743_2226199_+,NA|74aa|down_3|NC_008095.1_2226430_2226652_+,NA|369aa|down_4|NC_008095.1_2226803_2227910_+,NA|227aa|down_5|NC_008095.1_2229074_2229755_-,NA|63aa|down_6|NC_008095.1_2230147_2230336_+	NA|516aa|up_9|NC_008095.1_2212643_2214191_+	smart00857, Resolvase, Resolvase, N terminal domain	NA|142aa|up_8|NC_008095.1_2214187_2214613_+	NA	NA|186aa|up_7|NC_008095.1_2214729_2215287_+	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	NA|153aa|up_6|NC_008095.1_2215506_2215965_-	pfam09543, DUF2379, Protein of unknown function (DUF2379)	NA|391aa|up_5|NC_008095.1_2216215_2217388_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|146aa|up_4|NC_008095.1_2217344_2217782_+	NA	NA|116aa|up_3|NC_008095.1_2217973_2218321_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|125aa|up_2|NC_008095.1_2218372_2218747_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|663aa|up_1|NC_008095.1_2218947_2220936_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|319aa|up_0|NC_008095.1_2220965_2221922_+	pfam09544, DUF2381, Protein of unknown function (DUF2381)	NA|422aa|down_0|NC_008095.1_2222789_2224055_+	NA	NA|575aa|down_1|NC_008095.1_2223951_2225676_+	cd13442, CDI_toxin_Bp1026b_like, Mg-dependent tRNAse of the contact-dependent growth inhibition (CDI) system of Burkholderia pseudomallei 1026b, and related proteins	NA|152aa|down_2|NC_008095.1_2225743_2226199_+	NA	NA|74aa|down_3|NC_008095.1_2226430_2226652_+	NA	NA|369aa|down_4|NC_008095.1_2226803_2227910_+	NA	NA|227aa|down_5|NC_008095.1_2229074_2229755_-	NA	NA|63aa|down_6|NC_008095.1_2230147_2230336_+	NA	NA|321aa|down_7|NC_008095.1_2230749_2231712_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|598aa|down_8|NC_008095.1_2231930_2233724_+	COG5293, COG5293, Predicted ATPase [General function prediction only]	NA|1261aa|down_9|NC_008095.1_2234316_2238099_+	pfam13401, AAA_22, AAA domain
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	5	2276713-2277025	1	CRT	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	CGGGCTCGCNCATGTCGAAGGCGAACGGGTCGGCTTC	37	0	0	NA	NA	NA	4	4	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA,NA|128aa|down_6|NC_008095.1_2287571_2287955_+	NA|549aa|up_9|NC_008095.1_2259395_2261042_+	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|657aa|up_8|NC_008095.1_2261038_2263009_+	pfam04773, FecR, FecR protein	NA|647aa|up_7|NC_008095.1_2263011_2264952_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|198aa|up_6|NC_008095.1_2264988_2265582_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|106aa|up_5|NC_008095.1_2265588_2265906_-	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family	NA|381aa|up_4|NC_008095.1_2266000_2267143_-	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional	NA|403aa|up_3|NC_008095.1_2267267_2268476_-	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional	NA|451aa|up_2|NC_008095.1_2268738_2270091_+	pfam03901, Glyco_transf_22, Alg9-like mannosyltransferase family	NA|155aa|up_1|NC_008095.1_2270469_2270934_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|427aa|up_0|NC_008095.1_2271374_2272655_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|438aa|down_0|NC_008095.1_2277894_2279208_+	PRK07208, PRK07208, hypothetical protein; Provisional	NA|237aa|down_1|NC_008095.1_2279281_2279992_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|313aa|down_2|NC_008095.1_2280009_2280948_+	cd10940, CE4_PuuE_HpPgdA_like_1, Putative catalytic domain of uncharacterized bacterial polysaccharide deacetylases similar to bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA)	NA|285aa|down_3|NC_008095.1_2281090_2281945_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|308aa|down_4|NC_008095.1_2281980_2282904_+	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs	NA|1427aa|down_5|NC_008095.1_2283289_2287570_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|128aa|down_6|NC_008095.1_2287571_2287955_+	NA	NA|696aa|down_7|NC_008095.1_2287968_2290056_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|84aa|down_8|NC_008095.1_2290102_2290354_-	pfam11213, DUF3006, Protein of unknown function (DUF3006)	NA|257aa|down_9|NC_008095.1_2290353_2291124_-	PRK00024, PRK00024, DNA repair protein RadC
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	6	2283200-2283303	5	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	CTCGGCCGGCCCCGGGACGGTGGGCGGTTTCTT	33	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA,NA|128aa|down_0|NC_008095.1_2287571_2287955_+,NA|84aa|down_8|NC_008095.1_2294760_2295012_+	NA|403aa|up_9|NC_008095.1_2267267_2268476_-	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional	NA|451aa|up_8|NC_008095.1_2268738_2270091_+	pfam03901, Glyco_transf_22, Alg9-like mannosyltransferase family	NA|155aa|up_7|NC_008095.1_2270469_2270934_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|427aa|up_6|NC_008095.1_2271374_2272655_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|1629aa|up_5|NC_008095.1_2272801_2277688_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|438aa|up_4|NC_008095.1_2277894_2279208_+	PRK07208, PRK07208, hypothetical protein; Provisional	NA|237aa|up_3|NC_008095.1_2279281_2279992_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|313aa|up_2|NC_008095.1_2280009_2280948_+	cd10940, CE4_PuuE_HpPgdA_like_1, Putative catalytic domain of uncharacterized bacterial polysaccharide deacetylases similar to bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA)	NA|285aa|up_1|NC_008095.1_2281090_2281945_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|308aa|up_0|NC_008095.1_2281980_2282904_+	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs	NA|128aa|down_0|NC_008095.1_2287571_2287955_+	NA	NA|696aa|down_1|NC_008095.1_2287968_2290056_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|84aa|down_2|NC_008095.1_2290102_2290354_-	pfam11213, DUF3006, Protein of unknown function (DUF3006)	NA|257aa|down_3|NC_008095.1_2290353_2291124_-	PRK00024, PRK00024, DNA repair protein RadC	NA|153aa|down_4|NC_008095.1_2291281_2291740_-	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor	NA|321aa|down_5|NC_008095.1_2291812_2292775_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|395aa|down_6|NC_008095.1_2292867_2294052_+	cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis	NA|165aa|down_7|NC_008095.1_2294048_2294543_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|84aa|down_8|NC_008095.1_2294760_2295012_+	NA	NA|275aa|down_9|NC_008095.1_2295592_2296417_-	pfam13369, Transglut_core2, Transglutaminase-like superfamily
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	7	2505771-2505868	6	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	GGTGAGCACCCGTTCCGGGCATGGTGAGCAC	31	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|243aa|up_8|NC_008095.1_2491136_2491865_-,NA|94aa|up_6|NC_008095.1_2493873_2494155_-,NA|252aa|up_5|NC_008095.1_2494986_2495742_-,NA|117aa|up_0|NC_008095.1_2504094_2504445_-,NA|95aa|down_4|NC_008095.1_2513590_2513875_+,NA|151aa|down_6|NC_008095.1_2514420_2514873_+,NA|101aa|down_7|NC_008095.1_2514869_2515172_+	NA|296aa|up_9|NC_008095.1_2490192_2491080_-	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|243aa|up_8|NC_008095.1_2491136_2491865_-	NA	NA|656aa|up_7|NC_008095.1_2491861_2493829_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|94aa|up_6|NC_008095.1_2493873_2494155_-	NA	NA|252aa|up_5|NC_008095.1_2494986_2495742_-	NA	NA|582aa|up_4|NC_008095.1_2495934_2497680_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|989aa|up_3|NC_008095.1_2497841_2500808_+	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|387aa|up_2|NC_008095.1_2501014_2502175_-	sd00045, ANK, ankyrin repeats	NA|176aa|up_1|NC_008095.1_2502778_2503306_-	pfam09351, DUF1993, Domain of unknown function (DUF1993)	NA|117aa|up_0|NC_008095.1_2504094_2504445_-	NA	NA|513aa|down_0|NC_008095.1_2505964_2507503_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|254aa|down_1|NC_008095.1_2507686_2508448_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|1056aa|down_2|NC_008095.1_2508593_2511761_+	cd00081, Hint, Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e	NA|323aa|down_3|NC_008095.1_2512351_2513320_-	pfam13391, HNH_2, HNH endonuclease	NA|95aa|down_4|NC_008095.1_2513590_2513875_+	NA	NA|178aa|down_5|NC_008095.1_2513874_2514408_+	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase	NA|151aa|down_6|NC_008095.1_2514420_2514873_+	NA	NA|101aa|down_7|NC_008095.1_2514869_2515172_+	NA	NA|598aa|down_8|NC_008095.1_2516256_2518050_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|406aa|down_9|NC_008095.1_2518118_2519336_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	8	2901830-2902040	1	PILER-CR	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	GCGTGCGCGAGGCCCTGCGCGAGCGGCTGGCGGACGCGCTCCGCGG	46	0	0	NA	NA	NA	2	2	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|222aa|up_4|NC_008095.1_2897734_2898400_-,NA|46aa|up_3|NC_008095.1_2898723_2898861_-,NA|66aa|down_0|NC_008095.1_2903049_2903247_-,NA|219aa|down_6|NC_008095.1_2908950_2909607_+	NA|826aa|up_9|NC_008095.1_2887735_2890213_-	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad	NA|401aa|up_8|NC_008095.1_2890261_2891464_-	pfam08308, PEGA, PEGA domain	NA|501aa|up_7|NC_008095.1_2891526_2893029_-	pfam08308, PEGA, PEGA domain	NA|644aa|up_6|NC_008095.1_2893092_2895024_-	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed	NA|794aa|up_5|NC_008095.1_2895036_2897418_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|222aa|up_4|NC_008095.1_2897734_2898400_-	NA	NA|46aa|up_3|NC_008095.1_2898723_2898861_-	NA	NA|146aa|up_2|NC_008095.1_2898926_2899364_-	pfam08818, DUF1801, Domain of unknown function (DU1801)	NA|219aa|up_1|NC_008095.1_2899939_2900596_-	cd16275, BaeB-like_MBL-fold, Bacillus amyloliquefaciens BaeB and related proteins; MBL-fold metallo hydrolase domain	NA|180aa|up_0|NC_008095.1_2900730_2901270_+	cd16275, BaeB-like_MBL-fold, Bacillus amyloliquefaciens BaeB and related proteins; MBL-fold metallo hydrolase domain	NA|66aa|down_0|NC_008095.1_2903049_2903247_-	NA	NA|311aa|down_1|NC_008095.1_2903273_2904206_-	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|240aa|down_2|NC_008095.1_2904456_2905176_-	pfam09535, Gmx_para_CXXCG, Protein of unknown function (Gmx_para_CXXCG)	NA|225aa|down_3|NC_008095.1_2905188_2905863_-	pfam09533, DUF2380, Predicted lipoprotein of unknown function (DUF2380)	NA|246aa|down_4|NC_008095.1_2905899_2906637_-	pfam13398, Peptidase_M50B, Peptidase M50B-like	NA|726aa|down_5|NC_008095.1_2906773_2908951_+	pfam10459, Peptidase_S46, Peptidase S46	NA|219aa|down_6|NC_008095.1_2908950_2909607_+	NA	NA|168aa|down_7|NC_008095.1_2909622_2910126_-	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|547aa|down_8|NC_008095.1_2910287_2911928_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|323aa|down_9|NC_008095.1_2912027_2912996_-	TIGR04411, hypothetical_protein, type II secretion system protein N, Leptospira/Geobacter-type
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	9	3158796-3158977	2	PILER-CR	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	AGCGCCGGGCCCAGCAGCAGGCCGCCGCCGAGGAGCGCCGT	41	0	0	NA	NA	NA	2	2	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA,NA|175aa|down_6|NC_008095.1_3167035_3167560_+	NA|230aa|up_9|NC_008095.1_3148618_3149308_-	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|361aa|up_8|NC_008095.1_3149389_3150472_+	pfam16113, ECH_2, Enoyl-CoA hydratase/isomerase	NA|176aa|up_7|NC_008095.1_3150481_3151009_-	pfam04463, DUF523, Protein of unknown function (DUF523)	NA|225aa|up_6|NC_008095.1_3151149_3151824_-	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|346aa|up_5|NC_008095.1_3151820_3152858_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|217aa|up_4|NC_008095.1_3152978_3153629_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|252aa|up_3|NC_008095.1_3153630_3154386_+	cd07735, class_II_PDE_MBL-fold, class II cyclic nucleotide phosphodiesterases Saccharomyces cerevisiae PDE1, Dictyostelium discoideum PDE1 and PDE7, and related proteins; MBL-fold metallo-hydrolase domain	NA|284aa|up_2|NC_008095.1_3154448_3155300_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|411aa|up_1|NC_008095.1_3155371_3156604_+	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|425aa|up_0|NC_008095.1_3156613_3157888_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|879aa|down_0|NC_008095.1_3159450_3162087_+	COG1452, Imp, Organic solvent tolerance protein OstA [Cell envelope biogenesis, outer membrane]	NA|117aa|down_1|NC_008095.1_3162146_3162497_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|513aa|down_2|NC_008095.1_3162659_3164198_+	smart00634, BID_1, Bacterial Ig-like domain (group 1)	NA|234aa|down_3|NC_008095.1_3164306_3165008_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|261aa|down_4|NC_008095.1_3164956_3165739_+	PRK08139, PRK08139, enoyl-CoA hydratase; Validated	NA|330aa|down_5|NC_008095.1_3165745_3166735_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|175aa|down_6|NC_008095.1_3167035_3167560_+	NA	NA|255aa|down_7|NC_008095.1_3167577_3168342_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|154aa|down_8|NC_008095.1_3168486_3168948_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|74aa|down_9|NC_008095.1_3168937_3169159_+	pfam12277, DUF3618, Protein of unknown function (DUF3618)
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	10	3429291-3429481	3	PILER-CR	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	GCCTCCCGGGACGAAGCCACCGGGAATGACGGGCGCACCGT	41	0	0	NA	NA	NA	2	2	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|87aa|up_0|NC_008095.1_3427118_3427379_-,NA|399aa|down_0|NC_008095.1_3431916_3433113_+,NA|398aa|down_4|NC_008095.1_3438990_3440184_+,NA|411aa|down_7|NC_008095.1_3441675_3442908_+	NA|947aa|up_9|NC_008095.1_3412770_3415611_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|422aa|up_8|NC_008095.1_3415612_3416878_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|371aa|up_7|NC_008095.1_3416874_3417987_+	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family	NA|372aa|up_6|NC_008095.1_3417983_3419099_+	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family	NA|442aa|up_5|NC_008095.1_3419100_3420426_+	pfam04932, Wzy_C, O-Antigen ligase	NA|378aa|up_4|NC_008095.1_3420422_3421556_-	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins	NA|382aa|up_3|NC_008095.1_3421642_3422788_+	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins	NA|465aa|up_2|NC_008095.1_3423006_3424401_+	TIGR03023, Sugar_transferase	NA|646aa|up_1|NC_008095.1_3424469_3426407_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|87aa|up_0|NC_008095.1_3427118_3427379_-	NA	NA|399aa|down_0|NC_008095.1_3431916_3433113_+	NA	NA|931aa|down_1|NC_008095.1_3433200_3435993_-	PRK06556, PRK06556, vitamin B12-dependent ribonucleotide reductase; Validated	NA|114aa|down_2|NC_008095.1_3436597_3436939_+	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|600aa|down_3|NC_008095.1_3437094_3438894_+	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites	NA|398aa|down_4|NC_008095.1_3438990_3440184_+	NA	NA|165aa|down_5|NC_008095.1_3440327_3440822_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|287aa|down_6|NC_008095.1_3440818_3441679_+	sd00006, TPR, Tetratricopeptide repeat	NA|411aa|down_7|NC_008095.1_3441675_3442908_+	NA	NA|435aa|down_8|NC_008095.1_3443083_3444388_+	TIGR04275, beta_prop_Msarc, beta propeller repeat, Methanosarcina surface protein type	NA|435aa|down_9|NC_008095.1_3444648_3445953_+	TIGR04275, beta_prop_Msarc, beta propeller repeat, Methanosarcina surface protein type
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	11	4215080-4215177	7	CRISPRCasFinder	no	RT	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Unclear	GTGCTCACCATGTCCGGAACGGGTGCTCACC	31	1	4	4215111-4215146|4215111-4215146|4215111-4215146|4215111-4215146	NC_008095.1_2505792-2505757|NC_008095.1_4215178-4215213|NC_008095.1_7763583-7763548|NC_008095.1_2451449-2451414	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|204aa|up_6|NC_008095.1_4205487_4206099_-,NA|150aa|up_2|NC_008095.1_4211963_4212413_+,NA	NA|952aa|up_9|NC_008095.1_4199288_4202144_+	pfam10593, Z1, Z1 domain	NA|335aa|up_8|NC_008095.1_4202140_4203145_+	pfam14390, DUF4420, Putative PD-(D/E)XK family member, (DUF4420)	NA|716aa|up_7|NC_008095.1_4203147_4205295_+	pfam10592, AIPR, AIPR protein	NA|204aa|up_6|NC_008095.1_4205487_4206099_-	NA	NA|194aa|up_5|NC_008095.1_4206095_4206677_-	cd17549, REC_DctD-like, phosphoacceptor receiver (REC) domain of C4-dicarboxylic acid transport protein D (DctD) and similar proteins	NA|697aa|up_4|NC_008095.1_4206673_4208764_-	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	RT|408aa|up_3|NC_008095.1_4209847_4211071_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|150aa|up_2|NC_008095.1_4211963_4212413_+	NA	NA|254aa|up_1|NC_008095.1_4212521_4213283_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|513aa|up_0|NC_008095.1_4213466_4215005_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|502aa|down_0|NC_008095.1_4215248_4216754_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|254aa|down_1|NC_008095.1_4216750_4217512_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|402aa|down_2|NC_008095.1_4218072_4219278_+	pfam13546, DDE_5, DDE superfamily endonuclease	NA|4568aa|down_3|NC_008095.1_4220393_4234097_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|1581aa|down_4|NC_008095.1_4234157_4238900_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|1508aa|down_5|NC_008095.1_4239279_4243803_+	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|1065aa|down_6|NC_008095.1_4243858_4247053_+	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|413aa|down_7|NC_008095.1_4247154_4248393_-	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|229aa|down_8|NC_008095.1_4248424_4249111_-	PTZ00057, PTZ00057, glutathione s-transferase; Provisional	NA|755aa|down_9|NC_008095.1_4249224_4251489_+	pfam04738, Lant_dehydr_N, Lantibiotic dehydratase, C-terminus
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	12	4707722-4707815	8	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	CGCCCCGCTCGCCCTTCGCCTCCGGACCACG	31	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA,NA|161aa|down_9|NC_008095.1_4722977_4723460_+	NA|1042aa|up_9|NC_008095.1_4693456_4696582_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|396aa|up_8|NC_008095.1_4696578_4697766_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|470aa|up_7|NC_008095.1_4697771_4699181_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|653aa|up_6|NC_008095.1_4699375_4701334_+	pfam11617, Cu-binding_MopE, Putative metal-binding motif	NA|233aa|up_5|NC_008095.1_4701355_4702054_+	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents	NA|258aa|up_4|NC_008095.1_4702154_4702928_+	pfam02405, MlaE, Permease MlaE	NA|249aa|up_3|NC_008095.1_4702924_4703671_+	pfam02405, MlaE, Permease MlaE	NA|250aa|up_2|NC_008095.1_4703684_4704434_+	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents	NA|337aa|up_1|NC_008095.1_4704426_4705437_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD	NA|603aa|up_0|NC_008095.1_4705470_4707279_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|300aa|down_0|NC_008095.1_4708767_4709667_-	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|163aa|down_1|NC_008095.1_4709799_4710288_-	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily	NA|1522aa|down_2|NC_008095.1_4710525_4715091_+	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|487aa|down_3|NC_008095.1_4715094_4716555_+	PRK12810, gltD, glutamate synthase subunit beta; Reviewed	NA|139aa|down_4|NC_008095.1_4716665_4717082_+	PRK05753, PRK05753, nucleoside diphosphate kinase regulator; Provisional	NA|254aa|down_5|NC_008095.1_4717140_4717902_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|103aa|down_6|NC_008095.1_4718066_4718375_-	COG4654, COG4654, Cytochrome c551/c552 [Energy production and conversion]	NA|393aa|down_7|NC_008095.1_4718453_4719632_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1056aa|down_8|NC_008095.1_4719628_4722796_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|161aa|down_9|NC_008095.1_4722977_4723460_+	NA
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	13	6325869-6326077	2	CRT	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	GCGCGAGCCTGCTGCTCCGC	20	0	0	NA	NA	NA	3	3	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|140aa|up_7|NC_008095.1_6314818_6315238_-,NA|116aa|up_6|NC_008095.1_6315352_6315700_-,NA|144aa|down_3|NC_008095.1_6334941_6335373_-,NA|237aa|down_6|NC_008095.1_6337174_6337885_-,NA|154aa|down_7|NC_008095.1_6337956_6338418_-	NA|240aa|up_9|NC_008095.1_6310298_6311018_+	pfam17957, Big_7, Bacterial Ig domain	NA|1224aa|up_8|NC_008095.1_6311140_6314812_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|140aa|up_7|NC_008095.1_6314818_6315238_-	NA	NA|116aa|up_6|NC_008095.1_6315352_6315700_-	NA	NA|538aa|up_5|NC_008095.1_6315885_6317499_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|176aa|up_4|NC_008095.1_6318076_6318604_+	pfam09851, SHOCT, Short C-terminal domain	NA|178aa|up_3|NC_008095.1_6318625_6319159_+	pfam12158, DUF3592, Protein of unknown function (DUF3592)	NA|500aa|up_2|NC_008095.1_6319171_6320671_-	pfam14332, DUF4388, Domain of unknown function (DUF4388)	NA|617aa|up_1|NC_008095.1_6320690_6322541_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|284aa|up_0|NC_008095.1_6322579_6323431_-	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|318aa|down_0|NC_008095.1_6329487_6330441_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|839aa|down_1|NC_008095.1_6330879_6333396_+	PLN02437, PLN02437, ribonucleoside--diphosphate reductase large subunit	NA|337aa|down_2|NC_008095.1_6333471_6334482_+	cd01049, RNRR2, Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain	NA|144aa|down_3|NC_008095.1_6334941_6335373_-	NA	NA|72aa|down_4|NC_008095.1_6335504_6335720_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|394aa|down_5|NC_008095.1_6335797_6336979_-	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	NA|237aa|down_6|NC_008095.1_6337174_6337885_-	NA	NA|154aa|down_7|NC_008095.1_6337956_6338418_-	NA	NA|381aa|down_8|NC_008095.1_6338693_6339836_-	pfam13665, DUF4150, Domain of unknown function (DUF4150)	NA|350aa|down_9|NC_008095.1_6339849_6340899_-	PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase; Validated
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	14	7358690-7358769	9	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	CGCGAGGAGGACCCGTTCGGCGA	23	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|91aa|up_5|NC_008095.1_7352225_7352498_-,NA|79aa|down_8|NC_008095.1_7365814_7366051_+,NA|120aa|down_9|NC_008095.1_7366148_7366508_+	NA|257aa|up_9|NC_008095.1_7348461_7349232_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_8|NC_008095.1_7349228_7350044_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|296aa|up_7|NC_008095.1_7350083_7350971_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|414aa|up_6|NC_008095.1_7350987_7352229_-	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|91aa|up_5|NC_008095.1_7352225_7352498_-	NA	NA|600aa|up_4|NC_008095.1_7352476_7354276_-	TIGR04551, hypothetical_protein_CAP_1272, TIGR04551 family protein	NA|291aa|up_3|NC_008095.1_7354352_7355225_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|275aa|up_2|NC_008095.1_7355429_7356254_+	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein	NA|349aa|up_1|NC_008095.1_7356265_7357312_-	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|296aa|up_0|NC_008095.1_7357435_7358323_-	cd09010, MTAP_SsMTAPII_like_MTIP, 5'-deoxy-5'-methylthioadenosine phosphorylases (MTAP) similar to Sulfolobus solfataricus MTAPII and Pseudomonas aeruginosa PAO1 5'-methylthioinosine phosphorylase (MTIP)	NA|283aa|down_0|NC_008095.1_7359253_7360102_-	pfam14243, DUF4343, Domain of unknown function (DUF4343)	NA|218aa|down_1|NC_008095.1_7360215_7360869_-	PRK15401, PRK15401, DNA oxidative demethylase AlkB	NA|251aa|down_2|NC_008095.1_7360878_7361631_-	COG3826, COG3826, Uncharacterized protein conserved in bacteria [Function unknown]	NA|326aa|down_3|NC_008095.1_7361731_7362709_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|340aa|down_4|NC_008095.1_7362681_7363701_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|187aa|down_5|NC_008095.1_7363714_7364275_-	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase	NA|265aa|down_6|NC_008095.1_7364423_7365218_+	pfam00303, Thymidylat_synt, Thymidylate synthase	NA|160aa|down_7|NC_008095.1_7365214_7365694_+	pfam00186, DHFR_1, Dihydrofolate reductase	NA|79aa|down_8|NC_008095.1_7365814_7366051_+	NA	NA|120aa|down_9|NC_008095.1_7366148_7366508_+	NA
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	15	7763562-7763659	10	CRISPRCasFinder	no	csa3	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Type I-A	GGTGAGCACCCGTTCCGGGCATGGTGAGCAC	31	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|114aa|up_3|NC_008095.1_7758397_7758739_-,NA|57aa|down_2|NC_008095.1_7766423_7766594_+,NA|126aa|down_4|NC_008095.1_7768621_7768999_+	csa3|118aa|up_9|NC_008095.1_7752058_7752412_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|171aa|up_8|NC_008095.1_7752389_7752902_+	cd07826, SRPBCC_CalC_Aha1-like_9, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|388aa|up_7|NC_008095.1_7752988_7754152_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|213aa|up_6|NC_008095.1_7754698_7755337_+	pfam14771, DUF4476, Domain of unknown function (DUF4476)	NA|610aa|up_5|NC_008095.1_7755543_7757373_-	cd05483, retropepsin_like_bacteria, Bacterial aspartate proteases, retropepsin-like protease family	NA|279aa|up_4|NC_008095.1_7757369_7758206_-	COG1378, COG1378, Predicted transcriptional regulators [Transcription]	NA|114aa|up_3|NC_008095.1_7758397_7758739_-	NA	NA|502aa|up_2|NC_008095.1_7759731_7761237_-	TIGR01370, Uncharacterized_protein_DR_0705, extracellular protein	NA|396aa|up_1|NC_008095.1_7761469_7762657_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|238aa|up_0|NC_008095.1_7762678_7763392_-	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|513aa|down_0|NC_008095.1_7763755_7765294_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|254aa|down_1|NC_008095.1_7765477_7766239_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|57aa|down_2|NC_008095.1_7766423_7766594_+	NA	NA|382aa|down_3|NC_008095.1_7766759_7767905_-	cd06561, AlkD_like, A new structural DNA glycosylase	NA|126aa|down_4|NC_008095.1_7768621_7768999_+	NA	NA|402aa|down_5|NC_008095.1_7769115_7770321_+	pfam13546, DDE_5, DDE superfamily endonuclease	NA|52aa|down_6|NC_008095.1_7771546_7771702_+	pfam04634, DUF600, Protein of unknown function, DUF600	NA|129aa|down_7|NC_008095.1_7772192_7772579_+	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins	NA|220aa|down_8|NC_008095.1_7772592_7773252_-	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated	NA|501aa|down_9|NC_008095.1_7773424_7774927_+	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	16	8339056-8339145	11	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	ACGTCGTGGGCGGCGTGGCCAACG	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|109aa|up_6|NC_008095.1_8331748_8332075_-,NA|209aa|up_5|NC_008095.1_8332279_8332906_-,NA|309aa|down_6|NC_008095.1_8346264_8347191_+,NA|133aa|down_9|NC_008095.1_8349063_8349462_+	NA|363aa|up_9|NC_008095.1_8329065_8330154_-	PRK13007, PRK13007, succinyl-diaminopimelate desuccinylase; Reviewed	NA|210aa|up_8|NC_008095.1_8330179_8330809_-	cd20301, cupin_ChrR, anti-ECFsigma factor, ChrR , cupin domain	NA|275aa|up_7|NC_008095.1_8330870_8331695_-	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional	NA|109aa|up_6|NC_008095.1_8331748_8332075_-	NA	NA|209aa|up_5|NC_008095.1_8332279_8332906_-	NA	NA|53aa|up_4|NC_008095.1_8332930_8333089_-	pfam10262, Rdx, Rdx family	NA|481aa|up_3|NC_008095.1_8333355_8334798_+	cd06450, DOPA_deC_like, DOPA decarboxylase family	NA|240aa|up_2|NC_008095.1_8334879_8335599_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|700aa|up_1|NC_008095.1_8335641_8337741_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|170aa|up_0|NC_008095.1_8337880_8338390_-	PHA00432, PHA00432, internal virion protein A	NA|184aa|down_0|NC_008095.1_8340849_8341401_+	pfam06541, ABC_trans_CmpB, Putative ABC-transporter type IV	NA|345aa|down_1|NC_008095.1_8341570_8342605_+	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|245aa|down_2|NC_008095.1_8342699_8343434_-	pfam13417, GST_N_3, Glutathione S-transferase, N-terminal domain	NA|338aa|down_3|NC_008095.1_8343643_8344657_-	cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|306aa|down_4|NC_008095.1_8344775_8345693_+	cd08475, PBP2_CrgA_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|102aa|down_5|NC_008095.1_8345827_8346133_+	pfam04070, DUF378, Domain of unknown function (DUF378)	NA|309aa|down_6|NC_008095.1_8346264_8347191_+	NA	NA|308aa|down_7|NC_008095.1_8347260_8348184_+	pfam01062, Bestrophin, Bestrophin, RFP-TM, chloride channel	NA|244aa|down_8|NC_008095.1_8348205_8348937_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|133aa|down_9|NC_008095.1_8349063_8349462_+	NA
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	17	8479880-8479966	12	CRISPRCasFinder	no		RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Orphan	AGGGGCCTTCGTCGCCCTCTTCGCGGTGGC	30	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|190aa|up_6|NC_008095.1_8473713_8474283_-,NA|91aa|up_0|NC_008095.1_8479203_8479476_+,NA|53aa|down_5|NC_008095.1_8488361_8488520_+,NA|470aa|down_6|NC_008095.1_8488590_8490000_-,NA|288aa|down_9|NC_008095.1_8492517_8493381_-	NA|333aa|up_9|NC_008095.1_8471531_8472530_-	cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain	NA|127aa|up_8|NC_008095.1_8472545_8472926_-	cd00454, TrHb1_N, truncated hemoglobins (TrHbs, 2/2Hb, 2/2 globins); group 1 (N)	NA|137aa|up_7|NC_008095.1_8473281_8473692_-	PRK13446, atpC, F0F1 ATP synthase subunit epsilon; Provisional	NA|190aa|up_6|NC_008095.1_8473713_8474283_-	NA	NA|482aa|up_5|NC_008095.1_8474314_8475760_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|286aa|up_4|NC_008095.1_8475928_8476786_-	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|295aa|up_3|NC_008095.1_8476837_8477722_-	PRK13423, PRK13423, F0F1 ATP synthase subunit gamma; Provisional	NA|165aa|up_2|NC_008095.1_8477871_8478366_+	cd17574, REC_OmpR, phosphoacceptor receiver (REC) domain of OmpR family response regulators	NA|226aa|up_1|NC_008095.1_8478414_8479092_+	COG2949, SanA, Uncharacterized membrane protein [Function unknown]	NA|91aa|up_0|NC_008095.1_8479203_8479476_+	NA	NA|115aa|down_0|NC_008095.1_8481550_8481895_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|670aa|down_1|NC_008095.1_8481958_8483968_-	sd00045, ANK, ankyrin repeats	NA|289aa|down_2|NC_008095.1_8484163_8485030_+	cd06260, DUF820, Domain of unknown function (DUF820)	NA|608aa|down_3|NC_008095.1_8485033_8486857_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|360aa|down_4|NC_008095.1_8486929_8488009_-	cd00293, USP_Like, Usp: Universal stress protein family	NA|53aa|down_5|NC_008095.1_8488361_8488520_+	NA	NA|470aa|down_6|NC_008095.1_8488590_8490000_-	NA	NA|64aa|down_7|NC_008095.1_8490234_8490426_-	pfam05532, CsbD, CsbD-like	NA|592aa|down_8|NC_008095.1_8490695_8492471_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|288aa|down_9|NC_008095.1_8492517_8493381_-	NA
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	18	8579181-8583254	4,13,3	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Type I-U, Type I-U?,Type I-C	GTTTCAACCCACGCTCCCCGCGTTCACGAGGAGCGAC,GTTTCAACCCACGCTCCCCGCGTTCACGAGGAGCGAC,GTTTCAACCCACGCTCCCCGCGTTCACGAGGAGCGAC	37,37,37	1	1	8582826-8582861	NC_008095.1_8991399-8991434	NA:NA:NA	57,57,57	57	TypeI-U,TypeI-U?,TypeI-C	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|216aa|up_9|NC_008095.1_8569448_8570096_-,NA|51aa|up_8|NC_008095.1_8570480_8570633_+,NA|46aa|up_7|NC_008095.1_8570657_8570795_+,NA|933aa|up_6|NC_008095.1_8570799_8573598_-,NA|609aa|up_5|NC_008095.1_8573567_8575394_-,NA|168aa|up_4|NC_008095.1_8575390_8575894_-,NA|198aa|up_2|NC_008095.1_8577401_8577995_+,NA|73aa|up_0|NC_008095.1_8578849_8579068_-,NA	NA|216aa|up_9|NC_008095.1_8569448_8570096_-	NA	NA|51aa|up_8|NC_008095.1_8570480_8570633_+	NA	NA|46aa|up_7|NC_008095.1_8570657_8570795_+	NA	NA|933aa|up_6|NC_008095.1_8570799_8573598_-	NA	NA|609aa|up_5|NC_008095.1_8573567_8575394_-	NA	NA|168aa|up_4|NC_008095.1_8575390_8575894_-	NA	NA|461aa|up_3|NC_008095.1_8576015_8577398_-	PRK13531, PRK13531, regulatory ATPase RavA; Provisional	NA|198aa|up_2|NC_008095.1_8577401_8577995_+	NA	NA|239aa|up_1|NC_008095.1_8578032_8578749_+	pfam05728, UPF0227, Uncharacterized protein family (UPF0227)	NA|73aa|up_0|NC_008095.1_8578849_8579068_-	NA	cas2|97aa|down_0|NC_008095.1_8583436_8583727_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|343aa|down_1|NC_008095.1_8583735_8584764_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|214aa|down_2|NC_008095.1_8584776_8585418_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas7|305aa|down_3|NC_008095.1_8585414_8586329_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|583aa|down_4|NC_008095.1_8586367_8588116_-	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	cas5|220aa|down_5|NC_008095.1_8588112_8588772_-	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|768aa|down_6|NC_008095.1_8588793_8591097_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|238aa|down_7|NC_008095.1_8591508_8592222_+	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown]	NA|465aa|down_8|NC_008095.1_8592235_8593630_-	cd13131, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Vibrio cholerae NorM	NA|731aa|down_9|NC_008095.1_8593776_8595969_-	pfam09826, Beta_propel, Beta propeller domain
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	19	8858925-8859539	14,4,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas5,cas7,cas8b3,cas3,cas6	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Unclear	GTGCTCAACGCCTTTCGGCATCACGGCGAGCGGGAC,GTGCTCAACGCCTTTCGGCATCACGGCGAGCGGGAC,GTGCTCAACGCCTTTCGGCATCACGGCGAGCGGGAC	36,36,36	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	8,8,7	8	Unclear	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|71aa|up_2|NC_008095.1_8856436_8856649_-,NA|444aa|up_1|NC_008095.1_8856957_8858289_+,NA	NA|411aa|up_9|NC_008095.1_8845073_8846306_-	PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional	NA|995aa|up_8|NC_008095.1_8846309_8849294_-	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins	NA|297aa|up_7|NC_008095.1_8849381_8850272_-	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]	NA|1209aa|up_6|NC_008095.1_8850268_8853895_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|223aa|up_5|NC_008095.1_8853948_8854617_-	COG3932, COG3932, Uncharacterized ABC-type transport system, permease components [General function prediction only]	NA|181aa|up_4|NC_008095.1_8854653_8855196_-	TIGR02265, Mxa_TIGR02265, Myxococcales-restricted protein, TIGR02265 family	NA|219aa|up_3|NC_008095.1_8855419_8856076_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|71aa|up_2|NC_008095.1_8856436_8856649_-	NA	NA|444aa|up_1|NC_008095.1_8856957_8858289_+	NA	NA|204aa|up_0|NC_008095.1_8858308_8858920_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|252aa|down_0|NC_008095.1_8859618_8860374_-	smart00860, SMI1_KNR4, SMI1 / KNR4 family	cas2|98aa|down_1|NC_008095.1_8862676_8862970_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|554aa|down_2|NC_008095.1_8862973_8864635_-	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas5|215aa|down_3|NC_008095.1_8864680_8865325_-	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	cas7|303aa|down_4|NC_008095.1_8865321_8866230_-	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family	cas8b3|542aa|down_5|NC_008095.1_8866261_8867887_-	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas3|747aa|down_6|NC_008095.1_8867871_8870112_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas6|231aa|down_7|NC_008095.1_8870108_8870801_-	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	NA|490aa|down_8|NC_008095.1_8871178_8872648_-	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain	NA|308aa|down_9|NC_008095.1_8872972_8873896_+	TIGR02268, TIGR02268, Myxococcus xanthus paralogous family TIGR02268
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	20	8860814-8862428	15,5,6	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas5,cas7,cas8b3,cas3,cas6	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Unclear	GTGCTCAACGCCTTTCGGCATCACGGCGAGCGGGAC,GTGCTCAACGCCTTTCGGCATCACGGCGAGCGGGAC,GTGCTCAACGCCTTTCGGCATCACGGCGAGCGGGAC	36,36,36	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	22,22,22	22	Unclear	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|71aa|up_3|NC_008095.1_8856436_8856649_-,NA|444aa|up_2|NC_008095.1_8856957_8858289_+,NA	NA|995aa|up_9|NC_008095.1_8846309_8849294_-	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins	NA|297aa|up_8|NC_008095.1_8849381_8850272_-	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]	NA|1209aa|up_7|NC_008095.1_8850268_8853895_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|223aa|up_6|NC_008095.1_8853948_8854617_-	COG3932, COG3932, Uncharacterized ABC-type transport system, permease components [General function prediction only]	NA|181aa|up_5|NC_008095.1_8854653_8855196_-	TIGR02265, Mxa_TIGR02265, Myxococcales-restricted protein, TIGR02265 family	NA|219aa|up_4|NC_008095.1_8855419_8856076_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|71aa|up_3|NC_008095.1_8856436_8856649_-	NA	NA|444aa|up_2|NC_008095.1_8856957_8858289_+	NA	NA|204aa|up_1|NC_008095.1_8858308_8858920_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|252aa|up_0|NC_008095.1_8859618_8860374_-	smart00860, SMI1_KNR4, SMI1 / KNR4 family	cas2|98aa|down_0|NC_008095.1_8862676_8862970_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|554aa|down_1|NC_008095.1_8862973_8864635_-	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas5|215aa|down_2|NC_008095.1_8864680_8865325_-	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	cas7|303aa|down_3|NC_008095.1_8865321_8866230_-	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family	cas8b3|542aa|down_4|NC_008095.1_8866261_8867887_-	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas3|747aa|down_5|NC_008095.1_8867871_8870112_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas6|231aa|down_6|NC_008095.1_8870108_8870801_-	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	NA|490aa|down_7|NC_008095.1_8871178_8872648_-	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain	NA|308aa|down_8|NC_008095.1_8872972_8873896_+	TIGR02268, TIGR02268, Myxococcus xanthus paralogous family TIGR02268	NA|620aa|down_9|NC_008095.1_8873924_8875784_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_000012685.1_ASM1268v1	NC_008095	Myxococcus xanthus DK 1622, complete sequence	21	8884208-8888066	6,16,7	CRT,CRISPRCasFinder,PILER-CR	no	cas5,cas7,cas8b3,cas3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	Type III-B,Type III-A,Type III-C,Type III-D	NNNNNNGTGCTCAACGCCTTCCGGCATCACGGCGAGCGGCAC,GTGCTCAACGCCTTCCGGCATCACGGCGAGCGGCAC,GTGCTCAACGCCTTCCGGCATCACGGCGAGCGGCAC	42,36,36	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	53,52,51	53	TypeIII-B,TypeIII-A,TypeIII-C,TypeIII-D	RT,cas3,WYL,DEDDh,csa3,2OG_CAS,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas8b3,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,csm3gr7	NA|301aa|up_3|NC_008095.1_8877034_8877937_-,NA|172aa|up_2|NC_008095.1_8878176_8878692_-,NA	cas3|747aa|up_9|NC_008095.1_8867871_8870112_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas6|231aa|up_8|NC_008095.1_8870108_8870801_-	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	NA|490aa|up_7|NC_008095.1_8871178_8872648_-	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain	NA|308aa|up_6|NC_008095.1_8872972_8873896_+	TIGR02268, TIGR02268, Myxococcus xanthus paralogous family TIGR02268	NA|620aa|up_5|NC_008095.1_8873924_8875784_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|397aa|up_4|NC_008095.1_8875796_8876987_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|301aa|up_3|NC_008095.1_8877034_8877937_-	NA	NA|172aa|up_2|NC_008095.1_8878176_8878692_-	NA	NA|362aa|up_1|NC_008095.1_8878743_8879829_-	COG4279, COG4279, Uncharacterized conserved protein [Function unknown]	NA|1094aa|up_0|NC_008095.1_8879825_8883107_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	cas6|209aa|down_0|NC_008095.1_8888370_8888997_-	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cmr6gr7|357aa|down_1|NC_008095.1_8888993_8890064_-	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cmr5gr11|137aa|down_2|NC_008095.1_8890056_8890467_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|318aa|down_3|NC_008095.1_8890463_8891417_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|402aa|down_4|NC_008095.1_8891419_8892625_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|597aa|down_5|NC_008095.1_8892621_8894412_-	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B	csm3gr7|497aa|down_6|NC_008095.1_8894416_8895907_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|161aa|down_7|NC_008095.1_8896612_8897095_-	TIGR02256, Uncharacterized_protein_y4qB, integrative and conjugative element protein, VC0181 family	NA|588aa|down_8|NC_008095.1_8897123_8898887_-	TIGR02356, molybdopterin_biosynthesis_protein_moeB, thiazole biosynthesis adenylyltransferase ThiF, E	NA|368aa|down_9|NC_008095.1_8898948_8900052_-	pfam18144, SMODS, Second Messenger Oligonucleotide or Dinucleotide Synthetase domain
