assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000012385.1_ASM1238v1	NC_007940	Rickettsia bellii RML369-C, complete sequence	1	75731-75826	1	CRISPRCasFinder	no		PD-DExK,DEDDh,cas3	Orphan	TATGAAAAGTATAGCTCACCATTGGAT	27	1	1	75758-75799	NC_007940.1_1234269-1234228	NA	1	1	Orphan	PD-DExK,DEDDh,cas3	NA|56aa|up_9|NC_007940.1_63202_63370_+,NA|504aa|up_1|NC_007940.1_70563_72075_-,NA|1159aa|down_7|NC_007940.1_89920_93397_+	NA|56aa|up_9|NC_007940.1_63202_63370_+	NA	NA|303aa|up_8|NC_007940.1_63297_64206_-	smart00748, HEPN, Higher Eukarytoes and Prokaryotes Nucleotide-binding domain	NA|210aa|up_7|NC_007940.1_64238_64868_-	COG1636, COG1636, Uncharacterized protein conserved in bacteria [Function unknown]	NA|307aa|up_6|NC_007940.1_64916_65837_-	pfam04754, Transposase_31, Putative transposase, YhgA-like	NA|416aa|up_5|NC_007940.1_66071_67319_-	TIGR00883, Putative_metabolite_transport_protein, metabolite-proton symporter	NA|487aa|up_4|NC_007940.1_67518_68979_+	pfam12913, SH3_6, SH3 domain (SH3b1 type)	NA|317aa|up_3|NC_007940.1_68984_69935_-	pfam17542, RP853, Uncharacterized RP853	NA|209aa|up_2|NC_007940.1_69907_70534_-	pfam17460, RP854, Uncharacterized protein RP854	NA|504aa|up_1|NC_007940.1_70563_72075_-	NA	NA|878aa|up_0|NC_007940.1_72153_74787_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|1173aa|down_0|NC_007940.1_76047_79566_-	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|435aa|down_1|NC_007940.1_79730_81035_-	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|838aa|down_2|NC_007940.1_81129_83643_+	pfam13502, AsmA_2, AsmA-like C-terminal region	NA|420aa|down_3|NC_007940.1_83644_84904_+	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily	NA|249aa|down_4|NC_007940.1_84979_85726_+	COG0805, TatC, Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]	NA|427aa|down_5|NC_007940.1_85712_86993_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|808aa|down_6|NC_007940.1_87296_89720_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|1159aa|down_7|NC_007940.1_89920_93397_+	NA	NA|303aa|down_8|NC_007940.1_93400_94309_+	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|244aa|down_9|NC_007940.1_94353_95085_+	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane]
GCF_000012385.1_ASM1238v1	NC_007940	Rickettsia bellii RML369-C, complete sequence	2	360987-361240	2	CRISPRCasFinder	no		PD-DExK,DEDDh,cas3	Orphan	AGAAAGCAATAATTTCACTATTTCAAGTTTATCACCATTAATAGCTTGCT	50	0	0	NA	NA	NA	2	2	Orphan	PD-DExK,DEDDh,cas3	NA|67aa|up_8|NC_007940.1_348605_348806_+,NA|337aa|up_0|NC_007940.1_358998_360009_-,NA	NA|171aa|up_9|NC_007940.1_348066_348579_+	pfam12100, DUF3576, Domain of unknown function (DUF3576)	NA|67aa|up_8|NC_007940.1_348605_348806_+	NA	NA|832aa|up_7|NC_007940.1_348753_351249_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|479aa|up_6|NC_007940.1_351450_352887_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|587aa|up_5|NC_007940.1_352867_354628_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|261aa|up_4|NC_007940.1_354883_355666_-	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|243aa|up_3|NC_007940.1_355650_356379_-	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|449aa|up_2|NC_007940.1_356671_358018_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|274aa|up_1|NC_007940.1_358169_358991_-	sd00045, ANK, ankyrin repeats	NA|337aa|up_0|NC_007940.1_358998_360009_-	NA	NA|193aa|down_0|NC_007940.1_362891_363470_-	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair]	NA|230aa|down_1|NC_007940.1_363463_364153_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|227aa|down_2|NC_007940.1_364201_364882_-	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|204aa|down_3|NC_007940.1_364871_365483_-	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only]	NA|181aa|down_4|NC_007940.1_365532_366075_-	PRK00259, PRK00259, intracellular septation protein A; Reviewed	NA|286aa|down_5|NC_007940.1_366088_366946_-	pfam03239, FTR1, Iron permease FTR1 family	NA|128aa|down_6|NC_007940.1_366954_367338_-	pfam13473, Cupredoxin_1, Cupredoxin-like domain	NA|329aa|down_7|NC_007940.1_367564_368551_-	pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase	NA|209aa|down_8|NC_007940.1_369896_370523_+	COG3485, PcaH, Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]	NA|197aa|down_9|NC_007940.1_370932_371523_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins
GCF_000012385.1_ASM1238v1	NC_007940	Rickettsia bellii RML369-C, complete sequence	3	686789-687043	1	PILER-CR	no		PD-DExK,DEDDh,cas3	Orphan	CATATAAAGAGATAGTAGAGCTACTAAAAAGTTCTGATGATAATATCTGGTA	52	0	0	NA	NA	NA	2	2	Orphan	PD-DExK,DEDDh,cas3	NA|63aa|up_5|NC_007940.1_681388_681577_-,NA|183aa|up_0|NC_007940.1_686134_686683_-,NA|112aa|down_2|NC_007940.1_688540_688876_-,NA|370aa|down_6|NC_007940.1_692401_693511_+,NA|170aa|down_7|NC_007940.1_693507_694017_+,NA|255aa|down_9|NC_007940.1_694522_695287_-	NA|169aa|up_9|NC_007940.1_674392_674899_+	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|501aa|up_8|NC_007940.1_674907_676410_+	PRK09202, nusA, transcription elongation factor NusA; Validated	NA|829aa|up_7|NC_007940.1_676638_679125_+	PRK05306, infB, translation initiation factor IF-2; Validated	NA|636aa|up_6|NC_007940.1_679476_681384_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|63aa|up_5|NC_007940.1_681388_681577_-	NA	NA|502aa|up_4|NC_007940.1_681581_683087_-	pfam06414, Zeta_toxin, Zeta toxin	NA|605aa|up_3|NC_007940.1_683315_685130_+	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	NA|41aa|up_2|NC_007940.1_685540_685663_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|154aa|up_1|NC_007940.1_685655_686117_-	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	NA|183aa|up_0|NC_007940.1_686134_686683_-	NA	NA|58aa|down_0|NC_007940.1_687694_687868_-	COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]	NA|193aa|down_1|NC_007940.1_687867_688446_-	TIGR00741, Probable_sigma54_modulation_protein_ORF3_ORF95	NA|112aa|down_2|NC_007940.1_688540_688876_-	NA	NA|251aa|down_3|NC_007940.1_689788_690541_-	pfam12796, Ank_2, Ankyrin repeats (3 copies)	NA|89aa|down_4|NC_007940.1_691015_691282_+	PRK12612, PRK12612, putative monovalent cation/H+ antiporter subunit F; Reviewed	NA|381aa|down_5|NC_007940.1_691253_692396_+	PRK06617, PRK06617, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	NA|370aa|down_6|NC_007940.1_692401_693511_+	NA	NA|170aa|down_7|NC_007940.1_693507_694017_+	NA	NA|134aa|down_8|NC_007940.1_694056_694458_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|255aa|down_9|NC_007940.1_694522_695287_-	NA
GCF_000012385.1_ASM1238v1	NC_007940	Rickettsia bellii RML369-C, complete sequence	4	1299835-1299958	3	CRISPRCasFinder	no		PD-DExK,DEDDh,cas3	Orphan	GCATACAGAACGGTTATCGAGACCAATATTTTAC	34	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,cas3	NA|81aa|up_9|NC_007940.1_1286497_1286740_+,NA|87aa|up_6|NC_007940.1_1289941_1290202_+,NA|154aa|up_5|NC_007940.1_1290210_1290672_+,NA|30aa|up_1|NC_007940.1_1293949_1294039_+,NA|113aa|down_9|NC_007940.1_1311679_1312018_-	NA|81aa|up_9|NC_007940.1_1286497_1286740_+	NA	NA|315aa|up_8|NC_007940.1_1287166_1288111_-	cd10963, CE4_RC0012_like, Putative catalytic NodB homology domain of uncharacterized protein RC0012 from Rickettsia conorii and its bacterial homologs	NA|327aa|up_7|NC_007940.1_1288110_1289091_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|87aa|up_6|NC_007940.1_1289941_1290202_+	NA	NA|154aa|up_5|NC_007940.1_1290210_1290672_+	NA	NA|433aa|up_4|NC_007940.1_1290832_1292131_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|184aa|up_3|NC_007940.1_1292465_1293017_-	COG1268, BioY, Uncharacterized conserved protein [General function prediction only]	NA|223aa|up_2|NC_007940.1_1293279_1293948_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|30aa|up_1|NC_007940.1_1293949_1294039_+	NA	NA|879aa|up_0|NC_007940.1_1294630_1297267_+	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|872aa|down_0|NC_007940.1_1301097_1303713_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|340aa|down_1|NC_007940.1_1306621_1307641_+	COG0282, ackA, Acetate kinase [Energy production and conversion]	NA|63aa|down_2|NC_007940.1_1307647_1307836_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|83aa|down_3|NC_007940.1_1307862_1308111_+	TIGR01439, Uncharacterized_protein_Mb2626, looped-hinge helix DNA binding domain, AbrB family	NA|90aa|down_4|NC_007940.1_1308103_1308373_+	COG4374, COG4374, PIN domain nuclease, a component of toxin-antitoxin system (PIN domain) [Signal transduction]	NA|115aa|down_5|NC_007940.1_1308335_1308680_+	sd00045, ANK, ankyrin repeats	NA|440aa|down_6|NC_007940.1_1308679_1309999_+	pfam14300, DUF4375, Domain of unknown function (DUF4375)	NA|283aa|down_7|NC_007940.1_1310131_1310980_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|143aa|down_8|NC_007940.1_1310983_1311412_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|113aa|down_9|NC_007940.1_1311679_1312018_-	NA
