The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_003912	Campylobacter jejuni RM1221, complete sequence	1777831	200274	242165	1777831	capsid,tRNA,tail,transposase,terminase,integrase,plate	Campylobacter_phage(50.0%)	60	229158:229173	244450:244465
WP_002867122.1|200274_202083_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.5	9.2e-111
WP_002851726.1|202079_202598_+	translation initiation factor IF-3	NA	K4F6Y6	Cronobacter_phage	28.6	3.1e-11
WP_002900789.1|202636_203728_+	DNA adenine methylase	NA	E5ERN5	Ostreococcus_lucimarinus_virus	40.2	1.3e-59
WP_002854172.1|204812_205043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014517172.1|205159_205345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011049615.1|205423_205606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002867128.1|206042_206246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002851912.1|206504_206687_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_011049618.1|207609_208239_+	LexA family transcriptional regulator	NA	A7YG70	Campylobacter_phage	99.1	1.3e-59
WP_002843338.1|208319_208640_+	hypothetical protein	NA	A7YG71	Campylobacter_phage	100.0	2.9e-52
WP_002843339.1|208649_208844_+	hypothetical protein	NA	A7YG72	Campylobacter_phage	100.0	1.8e-28
WP_002873745.1|208923_209211_+	hypothetical protein	NA	A7YG83	Campylobacter_phage	100.0	3.0e-48
WP_011049621.1|209238_210054_-	DNA adenine methylase	NA	A7YG84	Campylobacter_phage	99.3	4.1e-151
WP_011049622.1|210255_210744_-	phage virion morphogenesis protein	NA	A7YG96	Campylobacter_phage	98.8	2.2e-88
WP_011049623.1|210747_212964_-|tail	phage tail tape measure protein	tail	A7YGE8	Campylobacter_phage	99.3	0.0e+00
WP_002791365.1|213005_213311_+	hypothetical protein	NA	A7YG88	Campylobacter_phage	90.1	1.9e-32
WP_002873740.1|213422_213662_-|tail	phage tail assembly protein	tail	A7YGZ3	Campylobacter_phage	93.8	9.4e-24
WP_002865376.1|213814_214324_-|tail	phage major tail tube protein	tail	A7YG76	Campylobacter_phage	100.0	3.3e-90
WP_011049625.1|214350_215544_-|tail	phage tail sheath family protein	tail	A7YGA3	Campylobacter_phage	99.2	1.2e-196
WP_011049626.1|215554_216568_-	hypothetical protein	NA	A7YGH6	Campylobacter_phage	97.9	5.5e-190
WP_002888062.1|216667_217039_-	DUF1353 domain-containing protein	NA	A7YGF6	Campylobacter_phage	100.0	5.7e-68
WP_002872718.1|217035_217542_-	DUF4376 domain-containing protein	NA	A7YGY7	Campylobacter_phage	98.2	6.3e-86
WP_011049627.1|217551_218631_-|tail	phage tail protein	tail	A7YGV0	Campylobacter_phage	99.3	1.9e-148
WP_002864870.1|218630_219251_-|tail	phage tail protein I	tail	A7YGM6	Campylobacter_phage	97.4	2.8e-59
WP_011049628.1|219247_220414_-|plate	baseplate J/gp47 family protein	plate	A0A1X9SH02	Bradyrhizobium_phage	25.8	2.6e-13
WP_002795239.1|220410_220701_-	GPW/gp25 family protein	NA	Q8H9N4	Vibrio_phage	40.8	2.7e-09
WP_002795238.1|220697_220889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011049629.1|220897_221530_-|plate	phage baseplate assembly protein V	plate	V5YUM9	Pseudomonas_phage	34.6	1.3e-08
WP_002784492.1|221529_221844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002784496.1|221955_222204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002827119.1|222200_222542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002870185.1|222552_222942_-	DUF882 domain-containing protein	NA	A0A1X9Q0V8	Human_gokushovirus	45.9	4.2e-21
WP_002784501.1|223090_223525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002901531.1|223526_224342_+	hypothetical protein	NA	A0A2H4JAW3	uncultured_Caudovirales_phage	48.4	2.9e-24
WP_041176812.1|224344_224872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002803364.1|224874_225852_+|capsid	major capsid protein	capsid	R9TRN2	Rhizobium_phage	23.7	5.1e-07
WP_002917934.1|225967_226426_+	DUF1320 family protein	NA	NA	NA	NA	NA
WP_002803360.1|226418_227018_+	DUF1804 family protein	NA	NA	NA	NA	NA
WP_038401728.1|227017_228688_+|terminase	phage terminase large subunit	terminase	H1ZZE1	Pseudomonas_virus	41.2	1.5e-91
WP_011049634.1|228697_230068_+	DUF935 family protein	NA	A0A2H4JHL1	uncultured_Caudovirales_phage	26.6	2.6e-17
229158:229173	attL	ATTTTTTATTTAAAAA	NA	NA	NA	NA
WP_002888039.1|230069_231308_+	hypothetical protein	NA	M4M9M5	Vibrio_phage	29.8	1.9e-19
WP_002784519.1|231433_231808_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_002784520.1|231800_231992_+|tail	tail protein X	tail	NA	NA	NA	NA
WP_002784521.1|231985_232963_+|tail	tail protein	tail	A0A219Y9Y2	Aeromonas_phage	25.3	1.1e-12
WP_002784523.1|232959_233244_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_002876312.1|233337_234009_+	endonuclease	NA	NA	NA	NA	NA
WP_002784526.1|234000_234276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002876315.1|234322_234772_-	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_002793908.1|234768_235461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002784531.1|235460_235730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011049635.1|235726_236689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002791413.1|236797_237184_-	hypothetical protein	NA	D5GVQ0	Campylobacter_virus	56.4	2.7e-36
WP_002791414.1|237180_237453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002791416.1|237516_237696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002806832.1|237692_238178_-	host-nuclease inhibitor Gam family protein	NA	A0A2K9VGT9	Faecalibacterium_phage	34.0	3.2e-18
WP_011049636.1|238284_238626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011049637.1|238721_238907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002891557.1|238890_239094_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_011049638.1|239096_240020_-	AAA family ATPase	NA	A0A2H4JAW1	uncultured_Caudovirales_phage	25.3	3.0e-09
WP_039332557.1|240089_242165_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
244450:244465	attR	TTTTTAAATAAAAAAT	NA	NA	NA	NA
>prophage 2
NC_003912	Campylobacter jejuni RM1221, complete sequence	1777831	527978	536463	1777831		Campylobacter_phage(90.0%)	12	NA	NA
WP_011049719.1|527978_529013_+	DUF5309 family protein	NA	A0A2I7SBK1	Pseudomonas_phage	30.9	1.2e-17
WP_002861675.1|529012_529417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002874379.1|529397_529592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168940553.1|531298_532237_+	hypothetical protein	NA	X2KLU0	Campylobacter_phage	67.5	3.1e-46
WP_002798141.1|532238_532688_+	hypothetical protein	NA	X2KR34	Campylobacter_phage	100.0	4.6e-80
WP_002873428.1|532700_533336_+	DUF4376 domain-containing protein	NA	X2KRD7	Campylobacter_phage	99.1	6.5e-96
WP_011049723.1|533332_533716_+	hypothetical protein	NA	X2KXD5	Campylobacter_phage	99.2	2.0e-60
WP_002874385.1|533708_534083_+	DUF1353 domain-containing protein	NA	X2KPN9	Campylobacter_phage	95.2	2.3e-64
WP_011049724.1|534079_535360_+	hypothetical protein	NA	X2KRN1	Campylobacter_phage	91.1	3.3e-208
WP_002858146.1|535408_535867_+	hypothetical protein	NA	X2KQY5	Campylobacter_phage	100.0	2.0e-83
WP_002857883.1|535928_536348_+	hypothetical protein	NA	X2KX19	Campylobacter_phage	100.0	6.3e-55
WP_002781772.1|536265_536463_+	hypothetical protein	NA	X2KPN2	Campylobacter_phage	96.9	3.7e-26
>prophage 3
NC_003912	Campylobacter jejuni RM1221, complete sequence	1777831	1319057	1371510	1777831	capsid,head,tRNA,tail,protease,integrase,terminase,portal	Campylobacter_phage(92.73%)	65	1333589:1333606	1348688:1348705
WP_002867346.1|1319057_1320899_-|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
WP_002867345.1|1320895_1322875_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	33.6	1.2e-18
WP_002857924.1|1322874_1323966_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_002874423.1|1323962_1325168_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	29.9	6.5e-28
WP_002867343.1|1325179_1327375_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	44.0	1.4e-07
WP_002853464.1|1327358_1327583_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002854049.1|1327593_1328313_-	UMP kinase	NA	NA	NA	NA	NA
WP_002867342.1|1328364_1329558_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_002867341.1|1329554_1330361_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002856386.1|1330347_1331013_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.8	2.8e-17
WP_011049923.1|1331082_1332261_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_074482847.1|1332260_1333496_-	fibronectin type III domain-containing protein	NA	NA	NA	NA	NA
WP_002867338.1|1333440_1334409_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
1333589:1333606	attL	ATAAAATACAAAAAATAA	NA	NA	NA	NA
WP_002887899.1|1334486_1335587_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_002787311.1|1335925_1337101_+|integrase	site-specific integrase	integrase	X2KXI6	Campylobacter_phage	100.0	1.7e-222
WP_002787309.1|1337097_1337304_-	helix-turn-helix domain-containing protein	NA	X2KXB9	Campylobacter_phage	100.0	4.8e-32
WP_002787307.1|1337305_1337659_-	hypothetical protein	NA	X2KRB4	Campylobacter_phage	100.0	2.1e-56
WP_002787306.1|1337676_1338432_-	site-specific DNA-methyltransferase	NA	X2KR14	Campylobacter_phage	100.0	9.6e-147
WP_002787304.1|1338409_1338676_-	hypothetical protein	NA	X2KLR9	Campylobacter_phage	100.0	4.7e-40
WP_002858334.1|1338659_1339031_-	hypothetical protein	NA	X2KQ09	Campylobacter_phage	100.0	1.2e-60
WP_011049924.1|1339031_1339256_-	hypothetical protein	NA	X2KXC3	Campylobacter_phage	100.0	4.1e-37
WP_002869676.1|1339264_1340026_-	hypothetical protein	NA	X2KQ45	Campylobacter_phage	99.5	4.0e-124
WP_002787295.1|1339962_1340277_-	hypothetical protein	NA	X2KR17	Campylobacter_phage	100.0	1.6e-50
WP_002787293.1|1340355_1340676_-	hypothetical protein	NA	X2KLS2	Campylobacter_phage	100.0	1.4e-51
WP_002787289.1|1341063_1341300_-	hypothetical protein	NA	X2KXC5	Campylobacter_phage	100.0	8.1e-36
WP_002787287.1|1341313_1342081_-	hypothetical protein	NA	X2KRC2	Campylobacter_phage	100.0	3.7e-138
WP_002787283.1|1342218_1342449_-	hypothetical protein	NA	X2KLS5	Campylobacter_phage	100.0	5.0e-38
WP_002787281.1|1342414_1342678_-	hypothetical protein	NA	X2KQ17	Campylobacter_phage	100.0	4.1e-44
WP_002787279.1|1342734_1343022_-	hypothetical protein	NA	X2KXC8	Campylobacter_phage	100.0	2.4e-50
WP_011049928.1|1343074_1343806_-	phage regulatory protein/antirepressor Ant	NA	X2KRC4	Campylobacter_phage	100.0	2.8e-127
WP_002912332.1|1344236_1344521_-	hypothetical protein	NA	X2KLS8	Campylobacter_phage	100.0	4.5e-41
WP_002870299.1|1344517_1344721_-	hypothetical protein	NA	X2KQ19	Campylobacter_phage	100.0	4.8e-29
WP_002870336.1|1344925_1345579_+	hypothetical protein	NA	X2KXC9	Campylobacter_phage	100.0	1.2e-113
WP_002870274.1|1345813_1346476_+	S24/S26 family peptidase	NA	X2KRC9	Campylobacter_phage	100.0	4.2e-122
WP_011049930.1|1346481_1347135_+	DNA/RNA non-specific endonuclease	NA	X2KR27	Campylobacter_phage	100.0	9.3e-122
WP_002870263.1|1347151_1347433_+	PLDc N-terminal domain-containing protein	NA	X2KLT3	Campylobacter_phage	100.0	9.3e-47
WP_002913413.1|1347446_1347644_-	hypothetical protein	NA	X2KQ22	Campylobacter_phage	100.0	4.4e-27
WP_002870261.1|1347561_1347981_-	hypothetical protein	NA	X2KXD3	Campylobacter_phage	100.0	2.9e-52
WP_002870260.1|1348209_1348671_-	hypothetical protein	NA	X2KRD2	Campylobacter_phage	100.0	1.4e-84
WP_011049931.1|1348719_1350003_-	hypothetical protein	NA	X2KRN1	Campylobacter_phage	99.8	2.8e-239
1348688:1348705	attR	TTATTTTTTGTATTTTAT	NA	NA	NA	NA
WP_011049932.1|1349999_1350374_-	DUF1353 domain-containing protein	NA	X2KPN9	Campylobacter_phage	100.0	3.4e-68
WP_002869963.1|1350366_1350750_-	hypothetical protein	NA	X2KXD5	Campylobacter_phage	100.0	2.4e-61
WP_002789149.1|1350746_1351382_-	DUF4376 domain-containing protein	NA	X2KRD7	Campylobacter_phage	100.0	1.3e-96
WP_002798141.1|1351394_1351844_-	hypothetical protein	NA	X2KR34	Campylobacter_phage	100.0	4.6e-80
WP_011049933.1|1351845_1353411_-	hypothetical protein	NA	X2KLU0	Campylobacter_phage	100.0	3.3e-210
WP_002869967.1|1353403_1354036_-	hypothetical protein	NA	X2KQ29	Campylobacter_phage	100.0	6.0e-110
WP_002788295.1|1354032_1354350_-|head,tail	head-tail adaptor protein	head,tail	X2KXD7	Campylobacter_phage	100.0	9.2e-51
WP_002788293.1|1354362_1354800_-|head,tail	phage gp6-like head-tail connector protein	head,tail	X2KR38	Campylobacter_phage	100.0	1.8e-76
WP_002788291.1|1354796_1355048_-	hypothetical protein	NA	X2KLU2	Campylobacter_phage	100.0	3.7e-18
WP_002788288.1|1355058_1356225_-|capsid	phage major capsid protein	capsid	X2KQ31	Campylobacter_phage	100.0	2.8e-214
WP_002788287.1|1356241_1356799_-|head,protease	HK97 family phage prohead protease	head,protease	X2KXE1	Campylobacter_phage	100.0	1.1e-96
WP_002788286.1|1356884_1357754_-	hypothetical protein	NA	X2KRE5	Campylobacter_phage	100.0	3.9e-168
WP_011049936.1|1357766_1363466_-	hypothetical protein	NA	X2KR41	Campylobacter_phage	99.9	0.0e+00
WP_002788283.1|1363525_1363864_+	hypothetical protein	NA	X2KLU6	Campylobacter_phage	100.0	1.6e-56
WP_002788282.1|1363855_1364071_-	hypothetical protein	NA	X2KXE3	Campylobacter_phage	100.0	2.2e-32
WP_002788281.1|1364151_1364508_-	hypothetical protein	NA	X2KRE9	Campylobacter_phage	100.0	1.8e-58
WP_002788279.1|1364504_1365485_-	hypothetical protein	NA	X2KR44	Campylobacter_phage	100.0	3.9e-180
WP_002788276.1|1365656_1366007_-	hypothetical protein	NA	X2KXE7	Campylobacter_phage	100.0	7.3e-57
WP_002800770.1|1366007_1366550_-	HK97 gp10 family phage protein	NA	X2KRF4	Campylobacter_phage	100.0	5.7e-93
WP_002788272.1|1366546_1367719_-|portal	phage portal protein	portal	X2KR48	Campylobacter_phage	100.0	3.1e-216
WP_002913302.1|1367878_1368313_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	X2KLV2	Campylobacter_phage	100.0	2.4e-78
WP_011049938.1|1368367_1369993_-|terminase	terminase large subunit	terminase	X2KXM1	Campylobacter_phage	100.0	0.0e+00
WP_011049939.1|1369996_1370632_-|terminase	P27 family phage terminase small subunit	terminase	X2KRQ1	Campylobacter_phage	100.0	1.9e-111
WP_002869973.1|1370882_1371233_-	HNH endonuclease	NA	X2KRF8	Campylobacter_phage	100.0	1.9e-65
WP_002788257.1|1371219_1371510_-	hypothetical protein	NA	X2KM44	Campylobacter_phage	97.4	2.6e-15
>prophage 4
NC_003912	Campylobacter jejuni RM1221, complete sequence	1777831	1506654	1515066	1777831		Bodo_saltans_virus(37.5%)	9	NA	NA
WP_002867277.1|1506654_1508136_-	NTP transferase domain-containing protein	NA	A0A2H4UUJ1	Bodo_saltans_virus	29.7	3.0e-51
WP_002867276.1|1508137_1508863_-	class II aldolase/adducin family protein	NA	A0A2H4UUW4	Bodo_saltans_virus	27.5	1.0e-12
WP_002867275.1|1508849_1510151_-	HAD-IA family hydrolase	NA	A0A2H4UUR3	Bodo_saltans_virus	35.6	3.8e-26
WP_002867274.1|1510143_1510737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002870158.1|1510711_1511392_-	nucleotidyltransferase family protein	NA	A0A2K9L821	Tupanvirus	25.1	2.5e-08
WP_002860371.1|1511379_1511985_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	35.0	3.7e-16
WP_002867272.1|1511972_1512992_-	D-glycero-D-manno-heptose 7-phosphate kinase	NA	A0A222YW25	Synechococcus_phage	39.9	3.9e-58
WP_002867271.1|1512988_1514020_-	GDP-mannose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	73.3	6.5e-146
WP_002867270.1|1514016_1515066_-	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	40.9	2.5e-76
