assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000011845.1_ASM1184v1	NC_006449	Streptococcus thermophilus CNRZ1066, complete sequence	1	625101-627844	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csm3gr7,csm4gr5,csm5gr7,csm6	Type II-B,Type II-A,Type II-C	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC,GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC,GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	36,36,36	0	0	NA	NA	NA:NA:NA	41,41,40	41	TypeII-B,TypeII-A,TypeII-C	cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csm3gr7,csm4gr5,csm5gr7,csm6	NA,NA	NA|355aa|up_9|NC_006449.1_612607_613672_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|183aa|up_8|NC_006449.1_613711_614260_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|454aa|up_7|NC_006449.1_614475_615837_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|74aa|up_6|NC_006449.1_617044_617266_+	COG3655, COG3655, Predicted transcriptional regulator [Transcription]	NA|153aa|up_5|NC_006449.1_617265_617724_+	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|204aa|up_4|NC_006449.1_618320_618932_+	pfam09911, DUF2140, Uncharacterized protein conserved in bacteria (DUF2140)	cas9|1129aa|up_3|NC_006449.1_619188_622575_+	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	cas1|304aa|up_2|NC_006449.1_622751_623663_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|108aa|up_1|NC_006449.1_623664_623988_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|351aa|up_0|NC_006449.1_623984_625037_+	pfam16813, Cas_St_Csn2, CRISPR-associated protein Csn2 subfamily St	NA|272aa|down_0|NC_006449.1_627885_628701_-	COG3689, COG3689, Predicted membrane protein [Function unknown]	NA|301aa|down_1|NC_006449.1_628700_629603_-	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|711aa|down_2|NC_006449.1_629966_632099_+	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|147aa|down_3|NC_006449.1_632085_632526_+	PRK04351, PRK04351, SprT family protein	NA|88aa|down_4|NC_006449.1_632592_632856_+	COG1983, PspC, Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]	NA|310aa|down_5|NC_006449.1_632987_633917_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|264aa|down_6|NC_006449.1_633916_634708_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|133aa|down_7|NC_006449.1_634830_635229_+	COG4768, COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain [General function prediction only]	NA|145aa|down_8|NC_006449.1_635241_635676_+	pfam12732, YtxH, YtxH-like protein	NA|99aa|down_9|NC_006449.1_635702_635999_-	pfam11674, DUF3270, Protein of unknown function (DUF3270)
GCF_000011845.1_ASM1184v1	NC_006449	Streptococcus thermophilus CNRZ1066, complete sequence	2	1551889-1551980	2	CRISPRCasFinder	no	cas3	cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csm3gr7,csm4gr5,csm5gr7,csm6	Unclear	CTTTTCTTTACGATATCAATTTTAACATCTTT	32	0	0	NA	NA	NA	1	1	Unclear	cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csm3gr7,csm4gr5,csm5gr7,csm6	NA|87aa|up_3|NC_006449.1_1547504_1547765_-,NA|143aa|down_6|NC_006449.1_1557883_1558312_-,NA|64aa|down_7|NC_006449.1_1559493_1559685_-	NA|322aa|up_9|NC_006449.1_1538349_1539315_+	cd08964, L-asparaginase_II, Type II (periplasmic) bacterial L-asparaginase	cas3|673aa|up_8|NC_006449.1_1540083_1542102_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|368aa|up_7|NC_006449.1_1542230_1543334_-	PRK00053, alr, alanine racemase; Reviewed	NA|120aa|up_6|NC_006449.1_1543354_1543714_-	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|344aa|up_5|NC_006449.1_1543717_1544749_-	COG0722, AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]	NA|850aa|up_4|NC_006449.1_1544772_1547322_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|87aa|up_3|NC_006449.1_1547504_1547765_-	NA	NA|316aa|up_2|NC_006449.1_1547851_1548799_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|298aa|up_1|NC_006449.1_1548864_1549758_-	pfam00480, ROK, ROK family	NA|634aa|up_0|NC_006449.1_1549942_1551844_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|481aa|down_0|NC_006449.1_1552092_1553535_+	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase	NA|145aa|down_1|NC_006449.1_1554599_1555034_-	PRK00202, nusB, transcription antitermination factor NusB	NA|130aa|down_2|NC_006449.1_1555026_1555416_-	pfam03780, Asp23, Asp23 family, cell envelope-related function	NA|187aa|down_3|NC_006449.1_1555486_1556047_-	PRK00529, PRK00529, elongation factor P; Validated	NA|152aa|down_4|NC_006449.1_1556159_1556615_-	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2	NA|354aa|down_5|NC_006449.1_1556633_1557695_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|143aa|down_6|NC_006449.1_1557883_1558312_-	NA	NA|64aa|down_7|NC_006449.1_1559493_1559685_-	NA	NA|91aa|down_8|NC_006449.1_1559846_1560119_-	pfam13061, DUF3923, Protein of unknown function (DUF3923)	NA|942aa|down_9|NC_006449.1_1560212_1563038_-	PRK00349, uvrA, excinuclease ABC subunit UvrA
