bac_id	spacer_id	hit_phage_id	hit_phage_def	spacer_sequence	hit_phage_region	hit_phage_sequence	mismatch	coverage	hmm_mismatch
NC_004547	4.1|891824|47|NC_004547|CRISPRCasFinder	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	GTCGCAGGAGCGATTTTCAACAACGCAAAGCGTTGGCCCGAAGTGGC	450667-450713	ACGCCGGGAGCGTTTTTGAACAACGCAAAGCGTTGGCCCGGGAACGG	2	0.723404255319149	13
NC_004547	4.1|891824|47|NC_004547|CRISPRCasFinder	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	GTCGCAGGAGCGATTTTCAACAACGCAAAGCGTTGGCCCGAAGTGGC	116040-116086	CCGTTCCCGGGCCAACGCTTTGCGTTGTTCAAAAACGCTCCCGGCGT	2	0.723404255319149	13
NC_004547	6.1|4124180|33|NC_004547|CRISPRCasFinder,CRT	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	GGGTTGCCTCGGCCTGAACAGCGATCTCGCGTG	188532-188564	TCTCCGCCTCGGCCTGAACCGCGTTCTCGCAGG	2	0.7575757575757576	9
NC_004547	6.1|4124180|33|NC_004547|CRISPRCasFinder,CRT	NZ_CP006371	Aureimonas sp. AU20 plasmid pAU20d, complete sequence	GGGTTGCCTCGGCCTGAACAGCGATCTCGCGTG	49261-49293	AAACCGAGATCGCCGTTCAGGCCGCGGCGCAGG	2	0.7272727272727273	10
NC_004547	6.1|4124180|33|NC_004547|CRISPRCasFinder,CRT	NC_013860	Azospirillum sp. B510 plasmid pAB510f, complete sequence	GGGTTGCCTCGGCCTGAACAGCGATCTCGCGTG	151316-151348	TGTCCGCCACGGCCTGAACCGCGATCTCGGCTT	2	0.7272727272727273	9
NC_004547	6.5|4124421|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	TGTCGAGCGCTGATTCGTCGGTCACTGGATAC	943451-943482	CATCGAGCGCTGGTTCGTCGGTCACGCGGCGG	1	0.71875	9
NC_004547	6.9|4124661|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	KC170283	Uncultured bacterium plasmid pDS1, complete sequence	ACGCTTGATATTGCTTATGGCGTGTTAGTTCA	34243-34274	TGAACTAATACGCCATAAGCAATATCAAGCGT	1	1.0	1
NC_004547	6.9|4124661|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	LC553734	Escherichia phage EK010 DNA, complete sequence	ACGCTTGATATTGCTTATGGCGTGTTAGTTCA	23285-23316	GACACTAACACGCCATAAGAAAGATCGTGAAT	2	0.71875	9
NC_004547	6.10|4124721|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	MN850583	Escherichia phage glasur, complete genome	GATCGGCAAAGATAATCAGGCACTCATCACCG	22093-22124	AATGTCCAAGGTTAATCAGGCACTCATCACTA	2	0.75	8
NC_004547	6.10|4124721|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	MN850624	Escherichia phage usur, complete genome	GATCGGCAAAGATAATCAGGCACTCATCACCG	19832-19863	TAGTGATGAGTGCCTGATTAACCTTAGACATT	2	0.71875	9
NC_004547	6.16|4125081|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	MN187550	Escherichia phage phiv142-3, complete genome	GCGTTAGGCTCGTCGGTGTAGATCAACTTTCC	18100-18131	GCCTGCGGCTGGTCTGTGTAGATCAACTTTCC	2	0.8125	5
NC_004547	6.16|4125081|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	JQ011317	Escherichia phage TL-2011b, complete genome	GCGTTAGGCTCGTCGGTGTAGATCAACTTTCC	20358-20389	GGAAAGTTGATCTACACAGACCAGCCGCAGGC	2	0.8125	5
NC_004547	6.16|4125081|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	KM389361	UNVERIFIED: Escherichia phage Phi05_1387 B clone contig00002 genomic sequence	GCGTTAGGCTCGTCGGTGTAGATCAACTTTCC	3500-3531	GGAAAGTTGATCTACACAGACCAGCCGCAGGC	2	0.8125	5
NC_004547	6.16|4125081|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	GCGTTAGGCTCGTCGGTGTAGATCAACTTTCC	892854-892885	TCGTTAGGATCGTCGGTGTAGATCCGGCGCAG	1	0.71875	10
NC_004547	6.21|4125381|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	MT601270	Bacillus phage vB_BsuM-Goe9, complete genome	CTGTCGCAGTATTTGACCCACGACGTGATGCT	121729-121760	GAAGCTCAGTATTTGACCCATGACTTGATTGA	2	0.71875	10
NC_004547	6.22|4125441|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP031083	Paracoccus yeei strain CCUG 32053 plasmid pYEE5, complete sequence	AGCTTGCGTTGCTCGTCTGTCAAATTGCGGGT	26662-26693	TACTTCAATATGACAGACGAGCAGCGCAAGCA	2	0.8125	7
NC_004547	6.24|4125561|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	AACCGTCGCTCGCTGGCCACTGTACGATTCGC	146946-146977	CAGCGAGCTTCGCTCGCCTCTGTACGATTCGC	2	0.71875	8
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	CCTGACGGCAACGCCGACGCCGATCCGACACA	2174896-2174927	GCTCGAGGATCGGCGTCGGCGGTGCCGTCCAT	1	0.71875	9
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	CCTGACGGCAACGCCGACGCCGATCCGACACA	2247594-2247625	GCTCGAGGATCGGCGTCGGCGGTGCCGTCCAT	1	0.71875	9
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	CCTGACGGCAACGCCGACGCCGATCCGACACA	1499090-1499121	GCTCGAGGATCGGCGTCGGCGGTGCCGTCCAT	1	0.71875	9
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	CCTGACGGCAACGCCGACGCCGATCCGACACA	473564-473595	GTCGTCGGATCGTCGTAGGCGTTGCCGCAGTC	2	0.75	10
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	CCTGACGGCAACGCCGACGCCGATCCGACACA	663774-663805	GTCGACCGCAACGCCGCCGCCGATCCGGGGGC	2	0.75	10
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NC_015314	Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence	CCTGACGGCAACGCCGACGCCGATCCGACACA	170481-170512	CTTGACGGCCAGGCCGACGCCGATCGCCAGCA	2	0.71875	8
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	CCTGACGGCAACGCCGACGCCGATCCGACACA	1897513-1897544	GCCAGGCGATCGGCGTCGGCGACGCCGTCACG	2	0.71875	8
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	CCTGACGGCAACGCCGACGCCGATCCGACACA	1696533-1696564	GCTCGAGGATCGGGGTCGGCGGTGCCGTCCAT	2	0.71875	10
NC_004547	6.26|4125681|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	MT663720	Pseudomonas phage DDSR119, complete genome	CCTGACGGCAACGCCGACGCCGATCCGACACA	20166-20197	CAGAACGGCAACGCCGACGCTGTTCCGGCTGC	2	0.71875	9
NC_004547	6.27|4125741|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_AP017309	Leptolyngbya sp. NIES-3755 plasmid plasmid1 DNA, complete genome	AATCAATGGCTCAGGGGATTCTACAACCCTAA	113938-113969	GCTCAATCGCTCAGGGGATTGTACAACGATGT	2	0.78125	8
NC_004547	6.28|4125801|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	HQ634195	Vibrio phage eugene 12A10 genomic sequence	GCATCCGTCCAGACCGTATCGATAGTCTCTGC	1234-1265	GCAGAGACTATCGATACTGTTTGGGACTTCTT	2	0.75	10
NC_004547	6.28|4125801|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	GCATCCGTCCAGACCGTATCGATAGTCTCTGC	1888607-1888638	GGGCCGCACATCGATATGTTCTGGACGGATGC	2	0.71875	9
NC_004547	6.28|4125801|32|NC_004547|CRISPRCasFinder,CRT,PILER-CR	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	GCATCCGTCCAGACCGTATCGATAGTCTCTGC	1955008-1955039	AGGCCGCACATCGATATGTTCTGGACGGATGC	2	0.71875	8
NC_004547	7.1|4134804|32|NC_004547|CRISPRCasFinder	KY271400	Klebsiella phage 6 LV-2017, complete genome	TTTCAGTTCAAACAGGCCTTGCCAGCAGTTGA	9070-9101	ATTTGGCTCAAACAGGCCTTGCCAGCCATTGG	2	0.75	7
NC_004547	8.2|4136049|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	MT012729	Salmonella phage vB_SenTO17, complete genome	AGCTCCGACCGACATGCGCTTAAAGGCGGCGA	14893-14924	GCTCCACCTTTAAGCGCGTGTCGGTCGGAGCT	2	0.90625	4
NC_004547	8.2|4136049|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	NZ_CP034472	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence	AGCTCCGACCGACATGCGCTTAAAGGCGGCGA	56382-56413	CAAGACCAGCGACCTGCGCTGAAAGGCGGCGA	2	0.71875	9
NC_004547	8.2|4136049|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	NZ_CP034477	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence	AGCTCCGACCGACATGCGCTTAAAGGCGGCGA	124649-124680	TCGCCGCCTTTCAGCGCAGGTCGCTGGTCTTG	2	0.71875	9
NC_004547	8.3|4136109|33|NC_004547|PILER-CR,CRISPRCasFinder,CRT	MH617742	Inoviridae sp. isolate ctbf14, complete genome	ATGCAGATATTGTAACTAAGCATCATATTGCAT	2728-2760	AATTGAATAATGTAACTAAGCATCAAATTGAAG	2	0.7272727272727273	9
NC_004547	8.4|4136170|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	NC_011564	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG1 DNA, complete sequence	TGTAGGCCATATAACAAATACTCAAAGATAAC	17230-17261	AAACGAAGATATAACAAATACTGAAAGTTAAG	2	0.71875	10
NC_004547	8.4|4136170|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	KT630649	Salmonella phage SEN34, complete genome	TGTAGGCCATATAACAAATACTCAAAGATAAC	21546-21577	GTTATCTTTTTGTATTTGTTATAAAATAGCAT	2	0.71875	7
NC_004547	8.9|4136470|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	MT771346	Gordonia phage MichaelScott, complete genome	ACGACGGATAGTCTCTGTCTGACGAACGCAAC	47211-47242	TGATCGTCGAGTCACTGTCTGACGAACGCAAC	1	0.71875	8
NC_004547	8.9|4136470|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	MH155867	Gordonia phage Easley, complete genome	ACGACGGATAGTCTCTGTCTGACGAACGCAAC	45531-45562	TGATCGTCGAGTCACTGTCTGACGAACGCAAC	1	0.71875	8
NC_004547	8.9|4136470|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	MK801729	Gordonia phage Clark, complete genome	ACGACGGATAGTCTCTGTCTGACGAACGCAAC	46530-46561	TGATCGTCGAGTCACTGTCTGACGAACGCAAC	1	0.71875	8
NC_004547	8.9|4136470|32|NC_004547|PILER-CR,CRISPRCasFinder,CRT	MG845393	Gordonia phage Beenie, complete genome	ACGACGGATAGTCTCTGTCTGACGAACGCAAC	46767-46798	TGATCGTCGAGTCACTGTCTGACGAACGCAAC	1	0.71875	8
NC_004547	8.10|4136530|32|NC_004547|CRISPRCasFinder,CRT	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	GCCCTGAAAAAAATGGGTTGTGATGACCATGC	173166-173197	CGCAGGTCATCAAAAGCCATTTTTTTCTCCCT	2	0.71875	8
NC_004547	8.10|4136530|32|NC_004547|CRISPRCasFinder,CRT	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	GCCCTGAAAAAAATGGGTTGTGATGACCATGC	401825-401856	AGGGAGAAAAAAATGGCTTTTGATGACCTGCG	2	0.71875	8
