assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	1	655191-655282	1	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	CAACTGCATAAAAGCCTCTAATCGCTAAAG	30	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|36aa|up_3|NC_002953.3_651763_651871_+,NA|169aa|down_4|NC_002953.3_658994_659501_+,NA|239aa|down_5|NC_002953.3_659662_660379_+	NA|313aa|up_9|NC_002953.3_645963_646902_+	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|179aa|up_8|NC_002953.3_647112_647649_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|up_7|NC_002953.3_647817_648294_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|up_6|NC_002953.3_648333_649629_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|174aa|up_5|NC_002953.3_649656_650178_+	pfam08741, YwhD, YwhD family	NA|337aa|up_4|NC_002953.3_650676_651687_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|36aa|up_3|NC_002953.3_651763_651871_+	NA	NA|139aa|up_2|NC_002953.3_651963_652380_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|up_1|NC_002953.3_652376_654038_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|212aa|up_0|NC_002953.3_654428_655064_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|296aa|down_0|NC_002953.3_655314_656202_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|317aa|down_1|NC_002953.3_656350_657301_+	pfam01032, FecCD, FecCD transport family	NA|240aa|down_2|NC_002953.3_657355_658075_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|267aa|down_3|NC_002953.3_658058_658859_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|169aa|down_4|NC_002953.3_658994_659501_+	NA	NA|239aa|down_5|NC_002953.3_659662_660379_+	NA	NA|263aa|down_6|NC_002953.3_660547_661336_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|125aa|down_7|NC_002953.3_661585_661960_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|310aa|down_8|NC_002953.3_662907_663837_-	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|75aa|down_9|NC_002953.3_664031_664256_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	2	812225-812305	2	CRISPRCasFinder	no	cas3	WYL,cas3,DEDDh,DinG,csa3	Unclear	TTCTTTATGTTGGGGCCCCGCCAACT	26	1	12	812251-812279|812251-812279|812251-812279|812251-812279|812251-812279|812251-812279|812251-812279|812251-812279|812251-812279|812251-812279|812251-812279|812251-812279	NC_002953.3_2756325-2756353|NC_002953.3_366581-366553|NC_002953.3_1509269-1509241|NC_002953.3_1821126-1821098|NC_002953.3_165532-165504|NC_002953.3_165590-165562|NC_002953.3_273610-273638|NC_002953.3_817685-817713|NC_002953.3_859715-859743|NC_002953.3_908487-908459|NC_002953.3_1171269-1171241|NC_002953.3_1643897-1643925	NA	1	1	Unclear	WYL,cas3,DEDDh,DinG,csa3	NA|35aa|up_7|NC_002953.3_803138_803243_+,NA|36aa|up_5|NC_002953.3_804675_804783_+,NA	NA|191aa|up_9|NC_002953.3_799579_800152_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NC_002953.3_800565_803097_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|NC_002953.3_803138_803243_+	NA	NA|370aa|up_6|NC_002953.3_803411_804522_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NC_002953.3_804675_804783_+	NA	NA|280aa|up_4|NC_002953.3_804930_805770_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NC_002953.3_805943_806594_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NC_002953.3_806590_806827_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NC_002953.3_807095_809081_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NC_002953.3_809088_811935_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NC_002953.3_812541_813474_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NC_002953.3_813479_814319_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NC_002953.3_814326_814812_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NC_002953.3_814819_816259_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NC_002953.3_816325_817261_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_5|NC_002953.3_818025_818937_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_6|NC_002953.3_818933_819929_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_7|NC_002953.3_820039_820984_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_8|NC_002953.3_821556_822144_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_9|NC_002953.3_822386_823289_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	3	859649-859730	3	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	2	859673-859706|859673-859706	NC_002953.3_1379459-1379426|NC_002953.3_1469200-1469233	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA,NA	NA|194aa|up_9|NC_002953.3_852776_853358_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|206aa|up_8|NC_002953.3_853406_854024_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_7|NC_002953.3_854178_854673_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_6|NC_002953.3_855071_855494_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_5|NC_002953.3_855641_856358_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_4|NC_002953.3_856440_856980_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_3|NC_002953.3_857129_857450_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_2|NC_002953.3_857593_857950_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_1|NC_002953.3_858107_858488_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|293aa|up_0|NC_002953.3_858666_859545_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NC_002953.3_860285_860672_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NC_002953.3_860664_860961_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NC_002953.3_861210_862236_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NC_002953.3_862228_862924_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NC_002953.3_862941_863763_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_5|NC_002953.3_864116_864311_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_6|NC_002953.3_864543_865395_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_7|NC_002953.3_865722_866484_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_8|NC_002953.3_866581_867889_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|417aa|down_9|NC_002953.3_867994_869245_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	4	1086739-1086831	4	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	AAAAGCCCCTAACAACTAAAAGTTGTAAGG	30	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA,NA|45aa|down_0|NC_002953.3_1086840_1086975_-,NA|432aa|down_1|NC_002953.3_1087126_1088422_+	NA|224aa|up_9|NC_002953.3_1074534_1075206_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|730aa|up_8|NC_002953.3_1075198_1077388_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_7|NC_002953.3_1077366_1078851_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_6|NC_002953.3_1078843_1079872_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_5|NC_002953.3_1079874_1080441_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_4|NC_002953.3_1080455_1081934_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_3|NC_002953.3_1081955_1083203_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_2|NC_002953.3_1083467_1084274_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_1|NC_002953.3_1084266_1085667_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_0|NC_002953.3_1085681_1086257_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|45aa|down_0|NC_002953.3_1086840_1086975_-	NA	NA|432aa|down_1|NC_002953.3_1087126_1088422_+	NA	NA|391aa|down_2|NC_002953.3_1088846_1090019_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_3|NC_002953.3_1090072_1090615_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_4|NC_002953.3_1090768_1091035_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_5|NC_002953.3_1091037_1092756_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_6|NC_002953.3_1092992_1093226_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_7|NC_002953.3_1093423_1094785_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_8|NC_002953.3_1094781_1095801_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|221aa|down_9|NC_002953.3_1095933_1096596_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	5	1244142-1244234	5	CRISPRCasFinder	no	cas3	WYL,cas3,DEDDh,DinG,csa3	Unclear	TAAGAAACACTAATCAATAAATTGATAAG	29	0	0	NA	NA	NA	1	1	Unclear	WYL,cas3,DEDDh,DinG,csa3	NA,NA	NA|215aa|up_9|NC_002953.3_1233953_1234598_+	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]	NA|214aa|up_8|NC_002953.3_1234604_1235246_+	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism]	NA|63aa|up_7|NC_002953.3_1235626_1235815_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|125aa|up_6|NC_002953.3_1236257_1236632_+	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown]	NA|549aa|up_5|NC_002953.3_1236646_1238293_+	COG1461, COG1461, Predicted kinase related to dihydroxyacetone kinase [General function prediction only]	cas3|687aa|up_4|NC_002953.3_1238482_1240543_+	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|191aa|up_3|NC_002953.3_1240745_1241318_+	PRK04424, PRK04424, transcription factor FapR	NA|329aa|up_2|NC_002953.3_1241322_1242309_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|309aa|up_1|NC_002953.3_1242301_1243228_+	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|245aa|up_0|NC_002953.3_1243220_1243955_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|78aa|down_0|NC_002953.3_1244324_1244558_+	PRK00982, acpP, acyl carrier protein; Provisional	NA|244aa|down_1|NC_002953.3_1244673_1245405_+	PRK00102, rnc, ribonuclease III; Reviewed	NA|1189aa|down_2|NC_002953.3_1245551_1249118_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|417aa|down_3|NC_002953.3_1249117_1250368_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|111aa|down_4|NC_002953.3_1250354_1250687_+	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|456aa|down_5|NC_002953.3_1250712_1252080_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|92aa|down_6|NC_002953.3_1252514_1252790_+	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]	NA|168aa|down_7|NC_002953.3_1252977_1253481_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|246aa|down_8|NC_002953.3_1253480_1254218_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|117aa|down_9|NC_002953.3_1254320_1254671_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	6	1254981-1255066	6	CRISPRCasFinder	no	cas3	WYL,cas3,DEDDh,DinG,csa3	Unclear	AAAGTCAGCTTACAATAATGTGCAAGTTGG	30	1	9	1255011-1255036|1255011-1255036|1255011-1255036|1255011-1255036|1255011-1255036|1255011-1255036|1255011-1255036|1255011-1255036|1255011-1255036	NC_002953.3_288868-288893|NC_002953.3_2756262-2756237|NC_002953.3_288924-288949|NC_002953.3_860032-860007|NC_002953.3_2756318-2756293|NC_002953.3_780650-780675|NC_002953.3_780706-780731|NC_002953.3_780762-780787|NC_002953.3_824883-824858	NA	1	1	Unclear	WYL,cas3,DEDDh,DinG,csa3	NA,NA	NA|78aa|up_9|NC_002953.3_1244324_1244558_+	PRK00982, acpP, acyl carrier protein; Provisional	NA|244aa|up_8|NC_002953.3_1244673_1245405_+	PRK00102, rnc, ribonuclease III; Reviewed	NA|1189aa|up_7|NC_002953.3_1245551_1249118_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|417aa|up_6|NC_002953.3_1249117_1250368_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|111aa|up_5|NC_002953.3_1250354_1250687_+	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|456aa|up_4|NC_002953.3_1250712_1252080_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|92aa|up_3|NC_002953.3_1252514_1252790_+	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]	NA|168aa|up_2|NC_002953.3_1252977_1253481_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|246aa|up_1|NC_002953.3_1253480_1254218_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|117aa|up_0|NC_002953.3_1254320_1254671_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|869aa|down_0|NC_002953.3_1255139_1257746_-	COG4485, COG4485, Predicted membrane protein [Function unknown]	NA|295aa|down_1|NC_002953.3_1258146_1259031_+	PRK09563, rbgA, GTPase YlqF; Reviewed	NA|256aa|down_2|NC_002953.3_1259014_1259782_+	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|389aa|down_3|NC_002953.3_1259890_1261057_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|303aa|down_4|NC_002953.3_1261078_1261987_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|373aa|down_5|NC_002953.3_1262213_1263332_+	pfam01476, LysM, LysM domain	NA|415aa|down_6|NC_002953.3_1263359_1264604_+	pfam02388, FemAB, FemAB family	NA|291aa|down_7|NC_002953.3_1264776_1265649_+	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|692aa|down_8|NC_002953.3_1265822_1267898_+	PRK05582, PRK05582, type I DNA topoisomerase	NA|436aa|down_9|NC_002953.3_1268053_1269361_+	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	7	1678189-1678274	7	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	TCTGTGTTGGGGCCCCATCCCCAACTT	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA,NA|49aa|down_3|NC_002953.3_1682279_1682426_-,NA|43aa|down_8|NC_002953.3_1685462_1685591_-	NA|208aa|up_9|NC_002953.3_1666925_1667549_-	PRK05480, PRK05480, uridine/cytidine kinase; Provisional	NA|423aa|up_8|NC_002953.3_1667548_1668817_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|308aa|up_7|NC_002953.3_1668828_1669752_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|213aa|up_6|NC_002953.3_1669754_1670393_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|103aa|up_5|NC_002953.3_1670677_1670986_-	PRK13678, PRK13678, hypothetical protein; Provisional	NA|143aa|up_4|NC_002953.3_1671000_1671429_-	COG0816, COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B	NA|87aa|up_3|NC_002953.3_1671432_1671693_-	PRK05473, IreB-like, IreB family regulatory phosphoprotein	NA|877aa|up_2|NC_002953.3_1671755_1674386_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|826aa|up_1|NC_002953.3_1674728_1677206_-	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|223aa|up_0|NC_002953.3_1677207_1677876_-	sd00006, TPR, Tetratricopeptide repeat	NA|373aa|down_0|NC_002953.3_1678456_1679575_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|381aa|down_1|NC_002953.3_1679575_1680718_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|338aa|down_2|NC_002953.3_1681029_1682043_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|49aa|down_3|NC_002953.3_1682279_1682426_-	NA	NA|61aa|down_4|NC_002953.3_1682465_1682648_-	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|141aa|down_5|NC_002953.3_1682747_1683170_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|425aa|down_6|NC_002953.3_1683254_1684529_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|258aa|down_7|NC_002953.3_1684689_1685463_-	COG1179, COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]	NA|43aa|down_8|NC_002953.3_1685462_1685591_-	NA	NA|589aa|down_9|NC_002953.3_1685923_1687690_-	PRK00476, aspS, aspartyl-tRNA synthetase; Validated
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	8	1764056-1764142	8	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	ATGCAAGTTGGGGTGGGGCCCCAACATAGA	30	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA,NA|33aa|down_4|NC_002953.3_1768466_1768565_-	NA|423aa|up_9|NC_002953.3_1748433_1749702_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|374aa|up_8|NC_002953.3_1749750_1750872_-	PRK14035, PRK14035, citrate synthase; Provisional	NA|454aa|up_7|NC_002953.3_1751219_1752581_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|586aa|up_6|NC_002953.3_1752928_1754686_-	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|323aa|up_5|NC_002953.3_1754707_1755676_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|315aa|up_4|NC_002953.3_1755944_1756889_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|286aa|up_3|NC_002953.3_1756888_1757746_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|410aa|up_2|NC_002953.3_1757940_1759170_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|1066aa|up_1|NC_002953.3_1759619_1762817_-	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]	NA|314aa|up_0|NC_002953.3_1762837_1763779_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|433aa|down_0|NC_002953.3_1764232_1765531_-	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|138aa|down_1|NC_002953.3_1765735_1766149_+	pfam00582, Usp, Universal stress protein family	NA|230aa|down_2|NC_002953.3_1766453_1767143_-	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|352aa|down_3|NC_002953.3_1767317_1768373_+	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|33aa|down_4|NC_002953.3_1768466_1768565_-	NA	NA|373aa|down_5|NC_002953.3_1768688_1769807_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|167aa|down_6|NC_002953.3_1769947_1770448_+	pfam00582, Usp, Universal stress protein family	NA|401aa|down_7|NC_002953.3_1770693_1771896_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|316aa|down_8|NC_002953.3_1771983_1772931_-	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|165aa|down_9|NC_002953.3_1773053_1773548_-	PRK00522, tpx, thiol peroxidase
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	9	1936254-1936381	9	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	AATTATGGAGCGGAAGATAGGATTTACACCTATACCTC	38	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|132aa|up_7|NC_002953.3_1928408_1928804_-,NA|51aa|up_6|NC_002953.3_1929409_1929562_-,NA	NA|274aa|up_9|NC_002953.3_1925545_1926367_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|462aa|up_8|NC_002953.3_1926827_1928213_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|132aa|up_7|NC_002953.3_1928408_1928804_-	NA	NA|51aa|up_6|NC_002953.3_1929409_1929562_-	NA	NA|200aa|up_5|NC_002953.3_1929586_1930186_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|up_4|NC_002953.3_1930344_1930815_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_3|NC_002953.3_1930819_1931947_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|241aa|up_2|NC_002953.3_1932097_1932820_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|up_1|NC_002953.3_1932812_1934270_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|up_0|NC_002953.3_1934527_1935589_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|149aa|down_0|NC_002953.3_1944449_1944896_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|317aa|down_1|NC_002953.3_1944992_1945943_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family	NA|152aa|down_2|NC_002953.3_1945948_1946404_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|430aa|down_3|NC_002953.3_1946484_1947774_+	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional	NA|365aa|down_4|NC_002953.3_1948066_1949161_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|579aa|down_5|NC_002953.3_1949352_1951089_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|181aa|down_6|NC_002953.3_1951379_1951922_-	PRK13662, PRK13662, hypothetical protein; Provisional	NA|346aa|down_7|NC_002953.3_1952223_1953261_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|326aa|down_8|NC_002953.3_1953412_1954390_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|279aa|down_9|NC_002953.3_1954650_1955487_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	10	2205169-2205249	10	CRISPRCasFinder	no	csa3	WYL,cas3,DEDDh,DinG,csa3	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|77aa|up_5|NC_002953.3_2200040_2200271_-,NA|364aa|up_0|NC_002953.3_2204060_2205152_+,NA|35aa|down_0|NC_002953.3_2205584_2205689_-,NA|53aa|down_1|NC_002953.3_2206368_2206527_+	NA|237aa|up_9|NC_002953.3_2195650_2196361_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NC_002953.3_2196481_2196925_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NC_002953.3_2197124_2197538_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NC_002953.3_2197995_2199369_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NC_002953.3_2200040_2200271_-	NA	NA|313aa|up_4|NC_002953.3_2200301_2201240_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NC_002953.3_2201675_2202341_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NC_002953.3_2202492_2202813_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NC_002953.3_2202814_2203795_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NC_002953.3_2204060_2205152_+	NA	NA|35aa|down_0|NC_002953.3_2205584_2205689_-	NA	NA|53aa|down_1|NC_002953.3_2206368_2206527_+	NA	NA|286aa|down_2|NC_002953.3_2207185_2208043_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_3|NC_002953.3_2208110_2208893_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_4|NC_002953.3_2209124_2210930_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_5|NC_002953.3_2211610_2213149_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_6|NC_002953.3_2213183_2215316_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_7|NC_002953.3_2215327_2215762_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_8|NC_002953.3_2215761_2216868_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|452aa|down_9|NC_002953.3_2224978_2226334_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	11	2217491-2217577	11	CRISPRCasFinder	no	csa3	WYL,cas3,DEDDh,DinG,csa3	Type I-A	GCCAACTGATGTTTGCGTATCATTAGT	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|364aa|up_9|NC_002953.3_2204060_2205152_+,NA|35aa|up_8|NC_002953.3_2205584_2205689_-,NA|53aa|up_7|NC_002953.3_2206368_2206527_+,NA	NA|364aa|up_9|NC_002953.3_2204060_2205152_+	NA	NA|35aa|up_8|NC_002953.3_2205584_2205689_-	NA	NA|53aa|up_7|NC_002953.3_2206368_2206527_+	NA	NA|286aa|up_6|NC_002953.3_2207185_2208043_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|up_5|NC_002953.3_2208110_2208893_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|up_4|NC_002953.3_2209124_2210930_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|up_3|NC_002953.3_2211610_2213149_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|up_2|NC_002953.3_2213183_2215316_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|up_1|NC_002953.3_2215327_2215762_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|up_0|NC_002953.3_2215761_2216868_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|452aa|down_0|NC_002953.3_2224978_2226334_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|311aa|down_1|NC_002953.3_2226360_2227293_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|270aa|down_2|NC_002953.3_2227294_2228104_-	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|303aa|down_3|NC_002953.3_2228292_2229201_-	cd09989, Arginase, Arginase family	NA|355aa|down_4|NC_002953.3_2235395_2236460_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|481aa|down_5|NC_002953.3_2236607_2238050_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|158aa|down_6|NC_002953.3_2238372_2238846_-	pfam17080, SepA, Multidrug Resistance efflux pump	NA|448aa|down_7|NC_002953.3_2238944_2240288_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|228aa|down_8|NC_002953.3_2240464_2241148_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|396aa|down_9|NC_002953.3_2241166_2242354_-	cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	12	2316676-2316761	12	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	CCAACTTGCACATTATTGTAAGCTGACTTT	30	1	1	2316706-2316731	NC_002953.3_1171190-1171165	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|55aa|up_9|NC_002953.3_2307247_2307412_+,NA|106aa|up_8|NC_002953.3_2307656_2307974_+,NA|84aa|up_5|NC_002953.3_2313095_2313347_+,NA|57aa|up_0|NC_002953.3_2316486_2316657_+,NA	NA|55aa|up_9|NC_002953.3_2307247_2307412_+	NA	NA|106aa|up_8|NC_002953.3_2307656_2307974_+	NA	NA|1056aa|up_7|NC_002953.3_2308157_2311325_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NC_002953.3_2311441_2312707_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NC_002953.3_2313095_2313347_+	NA	NA|255aa|up_4|NC_002953.3_2313338_2314103_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NC_002953.3_2314264_2314705_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NC_002953.3_2314697_2315909_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NC_002953.3_2316010_2316361_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|NC_002953.3_2316486_2316657_+	NA	NA|341aa|down_0|NC_002953.3_2316938_2317961_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NC_002953.3_2317980_2318580_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NC_002953.3_2318586_2318820_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NC_002953.3_2318825_2319272_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NC_002953.3_2319285_2319771_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NC_002953.3_2319767_2321027_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NC_002953.3_2321089_2321584_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NC_002953.3_2321585_2322092_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NC_002953.3_2322122_2323127_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NC_002953.3_2323296_2323902_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	13	2483626-2483704	13	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	CCAACTTGCATTGTCTCTAGAAA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|56aa|up_2|NC_002953.3_2479407_2479575_-,NA|36aa|down_0|NC_002953.3_2484010_2484118_-	NA|326aa|up_9|NC_002953.3_2473018_2473996_+	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|156aa|up_8|NC_002953.3_2474047_2474515_-	pfam06177, QueT, QueT transporter	NA|231aa|up_7|NC_002953.3_2474525_2475218_-	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism]	NA|372aa|up_6|NC_002953.3_2475228_2476344_-	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]	NA|336aa|up_5|NC_002953.3_2476321_2477329_-	PRK06256, PRK06256, biotin synthase; Validated	NA|453aa|up_4|NC_002953.3_2477330_2478689_-	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase	NA|229aa|up_3|NC_002953.3_2478666_2479353_-	COG0132, BioD, Dethiobiotin synthetase [Coenzyme metabolism]	NA|56aa|up_2|NC_002953.3_2479407_2479575_-	NA	NA|578aa|up_1|NC_002953.3_2479805_2481539_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|588aa|up_0|NC_002953.3_2481563_2483327_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|36aa|down_0|NC_002953.3_2484010_2484118_-	NA	NA|129aa|down_1|NC_002953.3_2484251_2484638_-	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|381aa|down_2|NC_002953.3_2484895_2486038_+	TIGR00045, Glycerate_kinase, glycerate kinase	NA|220aa|down_3|NC_002953.3_2486097_2486757_+	PHA02562, 46, endonuclease subunit; Provisional	NA|404aa|down_4|NC_002953.3_2486938_2488150_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|158aa|down_5|NC_002953.3_2488272_2488746_-	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|219aa|down_6|NC_002953.3_2488858_2489515_+	COG4990, COG4990, Uncharacterized protein conserved in bacteria [Function unknown]	NA|269aa|down_7|NC_002953.3_2489577_2490384_-	TIGR03729, acc_ester, putative phosphoesterase	NA|470aa|down_8|NC_002953.3_2490669_2492079_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|693aa|down_9|NC_002953.3_2492216_2494295_+	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]
GCF_000011525.1_ASM1152v1	NC_002953	Staphylococcus aureus subsp. aureus MSSA476, complete genome	14	2623839-2623946	14	CRISPRCasFinder	no		WYL,cas3,DEDDh,DinG,csa3	Orphan	ATTATTATAAATAATAAGTACACTACGGTTTACAGTTGG	39	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,DinG,csa3	NA|56aa|up_4|NC_002953.3_2617979_2618147_-,NA|64aa|up_1|NC_002953.3_2620830_2621022_+,NA|163aa|down_7|NC_002953.3_2631955_2632444_-	NA|57aa|up_9|NC_002953.3_2612089_2612260_-	pfam12669, P12, Virus attachment protein p12 family	NA|665aa|up_8|NC_002953.3_2612272_2614267_-	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|76aa|up_7|NC_002953.3_2614278_2614506_-	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism]	NA|830aa|up_6|NC_002953.3_2614721_2617211_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|183aa|up_5|NC_002953.3_2617355_2617904_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|56aa|up_4|NC_002953.3_2617979_2618147_-	NA	NA|515aa|up_3|NC_002953.3_2618258_2619803_-	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional	NA|200aa|up_2|NC_002953.3_2619992_2620592_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|64aa|up_1|NC_002953.3_2620830_2621022_+	NA	NA|803aa|up_0|NC_002953.3_2621261_2623670_+	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|69aa|down_0|NC_002953.3_2624018_2624225_+	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|333aa|down_1|NC_002953.3_2624314_2625313_-	PRK08605, PRK08605, D-lactate dehydrogenase; Validated	NA|385aa|down_2|NC_002953.3_2625335_2626490_-	PRK08068, PRK08068, transaminase; Reviewed	NA|503aa|down_3|NC_002953.3_2626916_2628425_-	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|288aa|down_4|NC_002953.3_2628436_2629300_-	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|376aa|down_5|NC_002953.3_2629336_2630464_-	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	NA|498aa|down_6|NC_002953.3_2630469_2631963_-	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|163aa|down_7|NC_002953.3_2631955_2632444_-	NA	NA|256aa|down_8|NC_002953.3_2632618_2633386_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|604aa|down_9|NC_002953.3_2633746_2635558_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]
