bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	1.1|848957|33|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	96.97	33	1	0	1	33	1082293	1082325	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	1082293-1082325	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	1.1|848957|33|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	96.97	33	1	0	1	33	2459441	2459409	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	2459409-2459441	TGGGTCCCAACAAAGAGAAATTGGATTCCCAAT	1
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	3.1|956486|26|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	92.31	26	2	0	1	26	2198950	2198975	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGTGG	2198950-2198975	CGCGGCCCCAACACAGAAGCTGGCGG	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	3.1|956486|26|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	92.31	26	2	0	1	26	2259032	2259057	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGTGG	2259032-2259057	CGGGGCCCCAACACAAAAGCTGGCGG	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.1|2078922|37|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.59	37	2	0	1	37	862223	862259	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	2e-09	53.9	1.0	CCAACTTGCACATTATTGTAAGCTGACAGAAAGTCAG	862223-862259	CCAACTTGCACATTATTGTAAGCTGGCGGAAAGTCAG	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.2|2078980|34|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.12	34	2	0	1	34	309364	309331	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	4e-08	49.1	1.0	AACTTGCATTGTCTGTAGAATTTCCTTTCGAAAT	309331-309364	ATTTCGAAAAGAAATTCTACAGGCAATGCAAGTT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.2|2078980|34|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.12	34	2	0	1	34	384121	384088	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	4e-08	49.1	1.0	AACTTGCATTGTCTGTAGAATTTCCTTTCGAAAT	384088-384121	ATTTCGAAAAGAAATTCTACAAACAATGCAAGTT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.2|2078980|34|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.12	34	2	0	1	34	815825	815792	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	4e-08	49.1	1.0	AACTTGCATTGTCTGTAGAATTTCCTTTCGAAAT	815792-815825	ATTTCGAAAAGAAATTCTACAAACAATGCAAGTT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.2|2078980|34|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.12	34	2	0	1	34	848996	849029	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	4e-08	49.1	1.0	AACTTGCATTGTCTGTAGAATTTCCTTTCGAAAT	848996-849029	AACTTGCATTGCCTGTAGAATTTCTTTTCGAAAT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.2|2078980|34|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.12	34	2	0	1	34	1108508	1108541	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	4e-08	49.1	1.0	AACTTGCATTGTCTGTAGAATTTCCTTTCGAAAT	1108508-1108541	AACTTGCATTGCCTGTAGAATTTCTTTTCGAAAT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.2|2078980|34|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.12	34	2	0	1	34	1856000	1855967	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	4e-08	49.1	1.0	AACTTGCATTGTCTGTAGAATTTCCTTTCGAAAT	1855967-1856000	ATTTCAAAAAGAAATTCTACAGACAATGCAAGTT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.2|2078980|34|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.12	34	2	0	1	34	2425121	2425154	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	4e-08	49.1	1.0	AACTTGCATTGTCTGTAGAATTTCCTTTCGAAAT	2425121-2425154	AACTTGCATTGTCTGTAGAATTTCTTTTTGAAAT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5.2|2078980|34|NC_002952|CRT	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	94.12	34	2	0	1	34	2567250	2567217	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	4e-08	49.1	1.0	AACTTGCATTGTCTGTAGAATTTCCTTTCGAAAT	2567217-2567250	ATTTCAAAAAGAAATTCTACAGACAATGCAAGTT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	8.1|2425182|31|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	96.77	31	1	0	1	31	1108571	1108601	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	7e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTTCGTCACCT	1108571-1108601	CACATTATTGTAAGCTGACTTTTCGTCAGCT	1
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	8.1|2425182|31|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	96.77	31	1	0	1	31	1729345	1729375	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	7e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTTCGTCACCT	1729345-1729375	CACATTATTGTAAGCTGACTTTTCGTCAGCT	1
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	8.1|2425182|31|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	93.55	31	2	0	1	31	862347	862377	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTTCGTCACCT	862347-862377	CACATTATTGTAAGCTGACTTTACGTCAGCT	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	8.1|2425182|31|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	93.55	31	2	0	1	31	911647	911617	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTTCGTCACCT	911617-911647	AGCTGACGAAAAGCCAGCTTACAATAATGTG	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	8.1|2425182|31|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	93.55	31	2	0	1	31	956477	956447	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTTCGTCACCT	956447-956477	AGCTGGCGAAAAGTCAGCTTACAATAATGTG	2
NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	8.1|2425182|31|NC_002952|CRISPRCasFinder	NC_002952.2	Staphylococcus aureus subsp. aureus MRSA252, complete genome	93.55	31	2	0	1	31	2068364	2068394	848931-849015|907335-907414|956456-956541|1257575-1257667|2078901-2079092|2324693-2324894|2385150-2385275|2425157-2425237	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTTCGTCACCT	2068364-2068394	CACATTATCGTAAGCTGACTTTTCGTCAGCT	2
