assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000011505.1_ASM1150v1	NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	1	848931-849015	1	CRISPRCasFinder	no	cas3	cas3,csa3,DEDDh,DinG,WYL	Unclear	CACCCCAACTTGCATTGTCTGTAGAA	26	1	2	848957-848989|848957-848989	NC_002952.2_1082293-1082325|NC_002952.2_2459441-2459409	NA	1	1	Unclear	cas3,csa3,DEDDh,DinG,WYL	NA|33aa|up_1|NC_002952.2_847371_847470_+,NA	NA|357aa|up_9|NC_002952.2_837380_838451_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|352aa|up_8|NC_002952.2_838768_839824_+	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|214aa|up_7|NC_002952.2_839987_840629_-	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|289aa|up_6|NC_002952.2_840772_841639_+	TIGR00762, DegV, EDD domain protein, DegV family	cas3|361aa|up_5|NC_002952.2_842002_843085_+	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]	NA|225aa|up_4|NC_002952.2_843077_843752_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|191aa|up_3|NC_002952.2_843812_844385_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_2|NC_002952.2_844798_847330_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|33aa|up_1|NC_002952.2_847371_847470_+	NA	NA|370aa|up_0|NC_002952.2_847644_848755_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|280aa|down_0|NC_002952.2_849523_850363_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|down_1|NC_002952.2_850536_851187_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|down_2|NC_002952.2_851183_851420_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|down_3|NC_002952.2_851688_853674_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|down_4|NC_002952.2_853681_856528_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_5|NC_002952.2_857138_858071_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|281aa|down_6|NC_002952.2_858076_858919_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_7|NC_002952.2_858926_859412_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_8|NC_002952.2_859419_860859_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_9|NC_002952.2_860925_861861_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase
GCF_000011505.1_ASM1150v1	NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	2	907335-907414	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	CCGTCAGCTTCTGTGTTGGGGCCC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|194aa|up_9|NC_002952.2_900288_900870_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|206aa|up_8|NC_002952.2_900942_901560_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_7|NC_002952.2_901715_902210_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_6|NC_002952.2_902608_903031_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_5|NC_002952.2_903178_903895_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_4|NC_002952.2_903977_904517_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_3|NC_002952.2_904666_904987_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_2|NC_002952.2_905130_905487_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_1|NC_002952.2_905644_906025_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|293aa|up_0|NC_002952.2_906202_907081_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NC_002952.2_907671_908058_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NC_002952.2_908050_908347_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NC_002952.2_908596_909622_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NC_002952.2_909614_910310_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NC_002952.2_910327_911149_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_5|NC_002952.2_911964_912159_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_6|NC_002952.2_912392_913244_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_7|NC_002952.2_913571_914333_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_8|NC_002952.2_914430_915738_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|417aa|down_9|NC_002952.2_915843_917094_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily
GCF_000011505.1_ASM1150v1	NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	3	956456-956541	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	AAAGTCAGCTTACAATAATGTGCAAGTTGG	30	1	2	956486-956511|956486-956511	NC_002952.2_2198950-2198975|NC_002952.2_2259032-2259057	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|499aa|up_9|NC_002952.2_945345_946842_-	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|114aa|up_8|NC_002952.2_946834_947176_-	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|143aa|up_7|NC_002952.2_947175_947604_-	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B	NA|802aa|up_6|NC_002952.2_947596_950002_-	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed	NA|128aa|up_5|NC_002952.2_950132_950516_-	pfam08810, KapB, Kinase associated protein B	NA|198aa|up_4|NC_002952.2_950579_951173_+	cd01927, cyclophilin_WD40, cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain	NA|126aa|up_3|NC_002952.2_951587_951965_+	COG1098, VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_2|NC_002952.2_952326_953454_+	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4	NA|397aa|up_1|NC_002952.2_953761_954952_+	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional	NA|415aa|up_0|NC_002952.2_955060_956305_+	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|310aa|down_0|NC_002952.2_956699_957629_-	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins	NA|460aa|down_1|NC_002952.2_957870_959250_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|402aa|down_2|NC_002952.2_959239_960445_-	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|444aa|down_3|NC_002952.2_960795_962127_+	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional	NA|192aa|down_4|NC_002952.2_962452_963028_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|175aa|down_5|NC_002952.2_963032_963557_+	TIGR02227, Inactive_signal_peptidase_IA	NA|192aa|down_6|NC_002952.2_963572_964148_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1159aa|down_7|NC_002952.2_964307_967784_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1218aa|down_8|NC_002952.2_967784_971438_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|301aa|down_9|NC_002952.2_971603_972506_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]
GCF_000011505.1_ASM1150v1	NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	4	1257575-1257667	4	CRISPRCasFinder	no	cas3	cas3,csa3,DEDDh,DinG,WYL	Unclear	TAAGAAACAGTAATCAATAAATTGATAACT	30	0	0	NA	NA	NA	1	1	Unclear	cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|215aa|up_9|NC_002952.2_1247449_1248094_+	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]	NA|214aa|up_8|NC_002952.2_1248100_1248742_+	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism]	NA|63aa|up_7|NC_002952.2_1249122_1249311_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|125aa|up_6|NC_002952.2_1249753_1250128_+	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown]	NA|549aa|up_5|NC_002952.2_1250142_1251789_+	COG1461, COG1461, Predicted kinase related to dihydroxyacetone kinase [General function prediction only]	cas3|687aa|up_4|NC_002952.2_1251978_1254039_+	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|191aa|up_3|NC_002952.2_1254241_1254814_+	PRK04424, PRK04424, transcription factor FapR	NA|329aa|up_2|NC_002952.2_1254818_1255805_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|309aa|up_1|NC_002952.2_1255797_1256724_+	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|245aa|up_0|NC_002952.2_1256716_1257451_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|78aa|down_0|NC_002952.2_1257756_1257990_+	PRK00982, acpP, acyl carrier protein; Provisional	NA|244aa|down_1|NC_002952.2_1258105_1258837_+	PRK00102, rnc, ribonuclease III; Reviewed	NA|1189aa|down_2|NC_002952.2_1258983_1262550_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|417aa|down_3|NC_002952.2_1262549_1263800_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|111aa|down_4|NC_002952.2_1263786_1264119_+	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|456aa|down_5|NC_002952.2_1264144_1265512_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|92aa|down_6|NC_002952.2_1265946_1266222_+	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]	NA|168aa|down_7|NC_002952.2_1266409_1266913_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|246aa|down_8|NC_002952.2_1266912_1267650_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|117aa|down_9|NC_002952.2_1267752_1268103_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional
GCF_000011505.1_ASM1150v1	NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	5	2078901-2079092	1	CRT	no	DEDDh	cas3,csa3,DEDDh,DinG,WYL	Unclear	NNTCTNTGTTGGGGCCCNCACC	22	2	9	2078922-2078958|2078980-2079013|2078980-2079013|2078980-2079013|2078980-2079013|2078980-2079013|2078980-2079013|2078980-2079013|2078980-2079013	NC_002952.2_862223-862259|NC_002952.2_309364-309331|NC_002952.2_384121-384088|NC_002952.2_815825-815792|NC_002952.2_848996-849029|NC_002952.2_1108508-1108541|NC_002952.2_1856000-1855967|NC_002952.2_2425121-2425154|NC_002952.2_2567250-2567217	NA	3	3	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|37aa|up_9|NC_002952.2_2070306_2070417_-,NA|31aa|up_5|NC_002952.2_2073422_2073515_-,NA|49aa|down_0|NC_002952.2_2079396_2079543_-	NA|37aa|up_9|NC_002952.2_2070306_2070417_-	NA	NA|244aa|up_8|NC_002952.2_2070502_2071234_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|up_7|NC_002952.2_2071235_2072549_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|up_6|NC_002952.2_2072840_2073341_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|up_5|NC_002952.2_2073422_2073515_-	NA	DEDDh|185aa|up_4|NC_002952.2_2073731_2074286_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|up_3|NC_002952.2_2074352_2075423_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|up_2|NC_002952.2_2075669_2076200_-	pfam11667, DUF3267, Putative zincin peptidase	NA|454aa|up_1|NC_002952.2_2076369_2077731_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|316aa|up_0|NC_002952.2_2077811_2078759_-	PRK13337, PRK13337, putative lipid kinase; Reviewed	NA|49aa|down_0|NC_002952.2_2079396_2079543_-	NA	NA|476aa|down_1|NC_002952.2_2079581_2081009_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|486aa|down_2|NC_002952.2_2081021_2082479_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|101aa|down_3|NC_002952.2_2082480_2082783_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|513aa|down_4|NC_002952.2_2083149_2084688_+	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	NA|400aa|down_5|NC_002952.2_2084776_2085976_-	COG4851, CamS, Protein involved in sex pheromone biosynthesis [General function prediction only]	NA|668aa|down_6|NC_002952.2_2085988_2087992_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|731aa|down_7|NC_002952.2_2087995_2090188_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|231aa|down_8|NC_002952.2_2090184_2090877_-	COG1646, COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]	NA|101aa|down_9|NC_002952.2_2091059_2091362_-	COG4496, COG4496, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_000011505.1_ASM1150v1	NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	6	2324693-2324894	1	PILER-CR	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	TCCTTGGTTGGCAGGTGCAGCTGGATGTGCTGTA	34	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|364aa|up_9|NC_002952.2_2302657_2303749_+,NA|35aa|up_8|NC_002952.2_2306109_2306214_-,NA|53aa|up_7|NC_002952.2_2306893_2307052_+,NA	NA|364aa|up_9|NC_002952.2_2302657_2303749_+	NA	NA|35aa|up_8|NC_002952.2_2306109_2306214_-	NA	NA|53aa|up_7|NC_002952.2_2306893_2307052_+	NA	NA|286aa|up_6|NC_002952.2_2307710_2308568_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|up_5|NC_002952.2_2308635_2309418_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|up_4|NC_002952.2_2309649_2311455_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|up_3|NC_002952.2_2312135_2313674_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|up_2|NC_002952.2_2313708_2315841_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|up_1|NC_002952.2_2315852_2316287_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|up_0|NC_002952.2_2316286_2317393_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|549aa|down_0|NC_002952.2_2325363_2327010_-	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|452aa|down_1|NC_002952.2_2327306_2328662_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|311aa|down_2|NC_002952.2_2328688_2329621_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|270aa|down_3|NC_002952.2_2329622_2330432_-	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|303aa|down_4|NC_002952.2_2330621_2331530_-	cd09989, Arginase, Arginase family	NA|355aa|down_5|NC_002952.2_2337746_2338811_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|158aa|down_6|NC_002952.2_2340590_2341064_-	pfam17080, SepA, Multidrug Resistance efflux pump	NA|448aa|down_7|NC_002952.2_2341185_2342529_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|228aa|down_8|NC_002952.2_2342706_2343390_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|396aa|down_9|NC_002952.2_2343408_2344596_-	cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc
GCF_000011505.1_ASM1150v1	NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	7	2385150-2385275	5	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	CCTCTTTACTCGAAAGCTCACAAAACTCTTGATATCA	37	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|56aa|up_8|NC_002952.2_2375556_2375724_+,NA|61aa|up_1|NC_002952.2_2384072_2384255_-,NA	NA|139aa|up_9|NC_002952.2_2374897_2375314_-	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|56aa|up_8|NC_002952.2_2375556_2375724_+	NA	NA|809aa|up_7|NC_002952.2_2375720_2378147_+	cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family	NA|285aa|up_6|NC_002952.2_2378206_2379061_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|272aa|up_5|NC_002952.2_2379271_2380087_-	cd02605, HAD_SPP, sucrose-phosphatase, similar to Synechocystis sp PCC 6803 SPP	NA|142aa|up_4|NC_002952.2_2380381_2380807_+	pfam03642, MAP, MAP domain	NA|235aa|up_3|NC_002952.2_2381197_2381902_-	COG3527, AlsD, Alpha-acetolactate decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|555aa|up_2|NC_002952.2_2381938_2383603_-	PRK08617, PRK08617, acetolactate synthase AlsS	NA|61aa|up_1|NC_002952.2_2384072_2384255_-	NA	NA|60aa|up_0|NC_002952.2_2384904_2385084_-	PRK09775, PRK09775, type II toxin-antitoxin system HipA family toxin YjjJ	NA|479aa|down_0|NC_002952.2_2385332_2386769_-	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|133aa|down_1|NC_002952.2_2387117_2387516_-	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|146aa|down_2|NC_002952.2_2387529_2387967_-	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|265aa|down_3|NC_002952.2_2388215_2389010_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|269aa|down_4|NC_002952.2_2389014_2389821_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|287aa|down_5|NC_002952.2_2389810_2390671_-	PRK13646, cbiO, energy-coupling factor transporter ATPase	NA|270aa|down_6|NC_002952.2_2390667_2391477_-	PRK13648, cbiO, cobalt transporter ATP-binding subunit; Provisional	NA|523aa|down_7|NC_002952.2_2391852_2393420_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|123aa|down_8|NC_002952.2_2393672_2394041_-	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|315aa|down_9|NC_002952.2_2394057_2395002_-	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional
GCF_000011505.1_ASM1150v1	NC_002952	Staphylococcus aureus subsp. aureus MRSA252, complete genome	8	2425157-2425237	6	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	TCTATGTTGGGGCCCCGCCAACTTG	25	1	6	2425182-2425212|2425182-2425212|2425182-2425212|2425182-2425212|2425182-2425212|2425182-2425212	NC_002952.2_1108571-1108601|NC_002952.2_1729345-1729375|NC_002952.2_862347-862377|NC_002952.2_911647-911617|NC_002952.2_956477-956447|NC_002952.2_2068364-2068394	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|55aa|up_9|NC_002952.2_2415686_2415851_+,NA|106aa|up_8|NC_002952.2_2416095_2416413_+,NA|84aa|up_5|NC_002952.2_2421537_2421789_+,NA|57aa|up_0|NC_002952.2_2424929_2425100_+,NA	NA|55aa|up_9|NC_002952.2_2415686_2415851_+	NA	NA|106aa|up_8|NC_002952.2_2416095_2416413_+	NA	NA|1056aa|up_7|NC_002952.2_2416599_2419767_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NC_002952.2_2419883_2421149_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NC_002952.2_2421537_2421789_+	NA	NA|255aa|up_4|NC_002952.2_2421780_2422545_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NC_002952.2_2422707_2423148_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NC_002952.2_2423140_2424352_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NC_002952.2_2424453_2424804_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|NC_002952.2_2424929_2425100_+	NA	NA|341aa|down_0|NC_002952.2_2425380_2426403_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NC_002952.2_2426422_2427022_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NC_002952.2_2427028_2427262_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NC_002952.2_2427267_2427714_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NC_002952.2_2427727_2428213_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NC_002952.2_2428209_2429469_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NC_002952.2_2429531_2430026_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NC_002952.2_2430027_2430534_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NC_002952.2_2430562_2431567_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NC_002952.2_2431734_2432340_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
