assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000010665.1_ASM1066v1	NC_012796	Desulfovibrio magneticus RS-1, complete genome	1	1589785-1591828	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	Type I-U,Type I-C, Type I-U?	GTCGCCCCCTGCGCGGGGGCGTGGATTGAAAC,GTCGCCCCCTGCGCGGGGGCGTGGATTGAAAC,GTCGCCCCCTGCGCGGGGGCGTGGATTGAAAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	30,30,30	30	TypeI-U?,TypeI-C,TypeI-U	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	NA,NA|577aa|down_2|NC_012796.1_1595940_1597671_-,NA|145aa|down_4|NC_012796.1_1599920_1600355_+,NA|208aa|down_8|NC_012796.1_1603414_1604038_+	NA|399aa|up_9|NC_012796.1_1579894_1581091_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|87aa|up_8|NC_012796.1_1581094_1581355_+	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|87aa|up_7|NC_012796.1_1581358_1581619_+	pfam10387, DUF2442, Protein of unknown function (DUF2442)	cas3|748aa|up_6|NC_012796.1_1581848_1584092_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|219aa|up_5|NC_012796.1_1584401_1585058_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|570aa|up_4|NC_012796.1_1585054_1586764_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|290aa|up_3|NC_012796.1_1586767_1587637_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|211aa|up_2|NC_012796.1_1587651_1588284_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|344aa|up_1|NC_012796.1_1588280_1589312_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NC_012796.1_1589315_1589606_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|452aa|down_0|NC_012796.1_1591907_1593263_+	pfam05598, DUF772, Transposase domain (DUF772)	NA|259aa|down_1|NC_012796.1_1593388_1594165_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|577aa|down_2|NC_012796.1_1595940_1597671_-	NA	NA|258aa|down_3|NC_012796.1_1598916_1599690_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|145aa|down_4|NC_012796.1_1599920_1600355_+	NA	NA|73aa|down_5|NC_012796.1_1600351_1600570_+	TIGR04111, conserved_hypothetical_protein, phage-associated protein, BcepMu gp16 family	NA|700aa|down_6|NC_012796.1_1600599_1602699_+	pfam09299, Mu-transpos_C, Mu transposase, C-terminal	NA|241aa|down_7|NC_012796.1_1602695_1603418_+	pfam13401, AAA_22, AAA domain	NA|208aa|down_8|NC_012796.1_1603414_1604038_+	NA	NA|178aa|down_9|NC_012796.1_1604030_1604564_+	pfam07352, Phage_Mu_Gam, Bacteriophage Mu Gam like protein
GCF_000010665.1_ASM1066v1	NC_012796	Desulfovibrio magneticus RS-1, complete genome	2	1937590-1937756	2	PILER-CR	no		WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	Orphan	GTCATATCATCTGATGTTT	19	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	NA|372aa|up_6|NC_012796.1_1930101_1931217_-,NA|121aa|up_0|NC_012796.1_1937182_1937545_-,NA	NA|1002aa|up_9|NC_012796.1_1924341_1927347_-	COG5305, COG5305, Predicted membrane protein [Function unknown]	NA|357aa|up_8|NC_012796.1_1927389_1928460_-	cd01998, tRNA_Me_trans, tRNA methyl transferase	NA|489aa|up_7|NC_012796.1_1928624_1930091_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|372aa|up_6|NC_012796.1_1930101_1931217_-	NA	NA|95aa|up_5|NC_012796.1_1931268_1931553_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|494aa|up_4|NC_012796.1_1931560_1933042_-	cd06339, PBP1_YraM_LppC_lipoprotein-like, periplasmic binding component of lipoprotein LppC, an immunodominant antigen	NA|638aa|up_3|NC_012796.1_1933175_1935089_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|177aa|up_2|NC_012796.1_1935210_1935741_-	pfam01025, GrpE, GrpE	NA|346aa|up_1|NC_012796.1_1935814_1936852_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|121aa|up_0|NC_012796.1_1937182_1937545_-	NA	NA|232aa|down_0|NC_012796.1_1937784_1938480_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|284aa|down_1|NC_012796.1_1938707_1939559_+	pfam13531, SBP_bac_11, Bacterial extracellular solute-binding protein	NA|264aa|down_2|NC_012796.1_1939551_1940343_+	TIGR02163, Ferredoxin-type_protein_NapH_homolog, ferredoxin-type protein, NapH/MauN family	NA|273aa|down_3|NC_012796.1_1940462_1941281_-	cd00519, Lipase_3, Lipase (class 3)	NA|236aa|down_4|NC_012796.1_1941386_1942094_-	cd03297, ABC_ModC_molybdenum_transporter, ATP-binding cassette domain of the molybdenum transport system	NA|249aa|down_5|NC_012796.1_1942166_1942913_-	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold	NA|223aa|down_6|NC_012796.1_1942927_1943596_-	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|222aa|down_7|NC_012796.1_1944397_1945063_-	pfam07238, PilZ, PilZ domain	NA|277aa|down_8|NC_012796.1_1945059_1945890_-	sd00006, TPR, Tetratricopeptide repeat	NA|423aa|down_9|NC_012796.1_1946217_1947486_-	TIGR01290, FeMo_cofactor_biosynthesis_protein_NifB, nitrogenase cofactor biosynthesis protein NifB
GCF_000010665.1_ASM1066v1	NC_012796	Desulfovibrio magneticus RS-1, complete genome	3	2575277-2575379	2	CRISPRCasFinder	no		WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	Orphan	GCCTCGGCCCGGCGCAGATCGGCCT	25	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	NA,NA	NA|550aa|up_9|NC_012796.1_2561831_2563481_+	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|337aa|up_8|NC_012796.1_2563685_2564696_-	TIGR00557, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase	NA|644aa|up_7|NC_012796.1_2564786_2566718_-	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|486aa|up_6|NC_012796.1_2566899_2568357_-	cd03791, GT5_Glycogen_synthase_DULL1-like, Glycogen synthase GlgA and similar proteins	NA|154aa|up_5|NC_012796.1_2568517_2568979_-	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|315aa|up_4|NC_012796.1_2569098_2570043_+	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins	NA|215aa|up_3|NC_012796.1_2570049_2570694_-	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|561aa|up_2|NC_012796.1_2570817_2572500_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|381aa|up_1|NC_012796.1_2572574_2573717_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|308aa|up_0|NC_012796.1_2573716_2574640_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|212aa|down_0|NC_012796.1_2575613_2576249_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|270aa|down_1|NC_012796.1_2576408_2577218_+	pfam02405, MlaE, Permease MlaE	NA|150aa|down_2|NC_012796.1_2577271_2577721_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD	NA|197aa|down_3|NC_012796.1_2577765_2578356_+	pfam05494, MlaC, MlaC protein	NA|307aa|down_4|NC_012796.1_2578494_2579415_+	pfam04333, MlaA, MlaA lipoprotein	NA|270aa|down_5|NC_012796.1_2579583_2580393_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|306aa|down_6|NC_012796.1_2580427_2581345_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|320aa|down_7|NC_012796.1_2581383_2582343_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|124aa|down_8|NC_012796.1_2582384_2582756_-	COG2198, ArcB, FOG: HPt domain [Signal transduction mechanisms]	NA|258aa|down_9|NC_012796.1_2582778_2583552_-	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD
GCF_000010665.1_ASM1066v1	NC_012796	Desulfovibrio magneticus RS-1, complete genome	4	4239119-4239346	3	PILER-CR	no	csa3	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	Type I-A	CCCCGCCCGGCCCGTCAAGCACTTTTTTTCAATCAACCCG	40	2	3	4239159-4239218|4239259-4239326|4239259-4239326	NC_012796.1_391025-390966|NC_012796.1_390931-390864|NC_012796.1_1824649-1824582	NA	2	2	Orphan	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	NA|143aa|up_3|NC_012796.1_4226981_4227410_+,NA|431aa|down_5|NC_012796.1_4245938_4247231_+,NA|65aa|down_6|NC_012796.1_4247220_4247415_+	csa3|105aa|up_9|NC_012796.1_4223210_4223525_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|128aa|up_8|NC_012796.1_4223624_4224008_+	pfam08859, DGC, DGC domain	NA|363aa|up_7|NC_012796.1_4224093_4225182_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|77aa|up_6|NC_012796.1_4225219_4225450_+	pfam13192, Thioredoxin_3, Thioredoxin domain	NA|123aa|up_5|NC_012796.1_4225854_4226223_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|236aa|up_4|NC_012796.1_4226235_4226943_+	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|143aa|up_3|NC_012796.1_4226981_4227410_+	NA	NA|242aa|up_2|NC_012796.1_4227974_4228700_-	cd10559, W-FDH, tungsten-containing formate dehydrogenase, small subunit	NA|1017aa|up_1|NC_012796.1_4228849_4231900_-	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit	NA|282aa|up_0|NC_012796.1_4232869_4233715_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|520aa|down_0|NC_012796.1_4239859_4241419_+	pfam00990, GGDEF, Diguanylate cyclase, GGDEF domain	NA|394aa|down_1|NC_012796.1_4241525_4242707_+	PRK09288, purT, formate-dependent phosphoribosylglycinamide formyltransferase	NA|350aa|down_2|NC_012796.1_4242796_4243846_-	PRK01889, PRK01889, GTPase RsgA; Reviewed	NA|172aa|down_3|NC_012796.1_4244091_4244607_-	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|273aa|down_4|NC_012796.1_4244997_4245816_+	COG0648, Nfo, Endonuclease IV [DNA replication, recombination, and repair]	NA|431aa|down_5|NC_012796.1_4245938_4247231_+	NA	NA|65aa|down_6|NC_012796.1_4247220_4247415_+	NA	NA|88aa|down_7|NC_012796.1_4247447_4247711_-	PRK10019, PRK10019, nickel/cobalt efflux transporter RcnA	NA|984aa|down_8|NC_012796.1_4248118_4251070_-	COG5305, COG5305, Predicted membrane protein [Function unknown]	NA|125aa|down_9|NC_012796.1_4251066_4251441_-	sd00010, SLR, Sel1-like repeat
GCF_000010665.1_ASM1066v1	NC_012796	Desulfovibrio magneticus RS-1, complete genome	5	4725356-4726585	3,2,4	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas4	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	Type I-F	TTTTCTGAGCTGCCTATGCGGCAGTGAAC,TTTCTGAGCTGCCTATGCGGCAGTGAAC,TTTCTGAGCTGCCTATGCGGCAGTGAAC	29,28,28	0	0	NA	NA	I-F:I-F:I-F	20,20,20	20	TypeI-F	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,PrimPol,DEDDh,csa3,cas6f,cas7f,cas5f,cas8f,cas3f	NA|218aa|up_1|NC_012796.1_4723306_4723960_+,NA|117aa|down_6|NC_012796.1_4735590_4735941_-,NA|129aa|down_7|NC_012796.1_4735961_4736348_-,NA|184aa|down_9|NC_012796.1_4737534_4738086_-	NA|618aa|up_9|NC_012796.1_4707294_4709148_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|156aa|up_8|NC_012796.1_4709486_4709954_+	cd12107, Hemerythrin, Hemerythrin	NA|311aa|up_7|NC_012796.1_4710401_4711334_+	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]	NA|176aa|up_6|NC_012796.1_4711524_4712052_+	COG1719, COG1719, Predicted hydrocarbon binding protein (contains V4R domain) [General function prediction only]	NA|513aa|up_5|NC_012796.1_4712069_4713608_+	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|1376aa|up_4|NC_012796.1_4714435_4718563_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|820aa|up_3|NC_012796.1_4719605_4722065_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|220aa|up_2|NC_012796.1_4722311_4722971_-	smart00318, SNc, Staphylococcal nuclease homologues	NA|218aa|up_1|NC_012796.1_4723306_4723960_+	NA	NA|440aa|up_0|NC_012796.1_4723959_4725279_+	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	cas6f|188aa|down_0|NC_012796.1_4726712_4727276_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|342aa|down_1|NC_012796.1_4727278_4728304_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|336aa|down_2|NC_012796.1_4728303_4729311_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|455aa|down_3|NC_012796.1_4729303_4730668_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas3f|1085aa|down_4|NC_012796.1_4730904_4734159_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|331aa|down_5|NC_012796.1_4734155_4735148_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	NA|117aa|down_6|NC_012796.1_4735590_4735941_-	NA	NA|129aa|down_7|NC_012796.1_4735961_4736348_-	NA	NA|311aa|down_8|NC_012796.1_4736605_4737538_-	pfam06067, DUF932, Domain of unknown function (DUF932)	NA|184aa|down_9|NC_012796.1_4737534_4738086_-	NA
