assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000010585.1_ASM1058v1	NC_011999	Macrococcus caseolyticus JCSC5402, complete genome	1	1516380-1516470	1	CRISPRCasFinder	no	csa3	RT,cas3,DEDDh,DinG,csa3	Type I-A	GGAGACTTTTTGCGGATAAAGGGAGAC	27	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,DinG,csa3	NA|108aa|up_5|NC_011999.1_1512907_1513231_+,NA|32aa|up_0|NC_011999.1_1516058_1516154_-,NA|69aa|down_1|NC_011999.1_1518287_1518494_+,NA|71aa|down_2|NC_011999.1_1518574_1518787_+	NA|437aa|up_9|NC_011999.1_1507703_1509014_+	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional	NA|320aa|up_8|NC_011999.1_1509036_1509996_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|235aa|up_7|NC_011999.1_1510108_1510813_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|507aa|up_6|NC_011999.1_1510835_1512356_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|108aa|up_5|NC_011999.1_1512907_1513231_+	NA	NA|189aa|up_4|NC_011999.1_1513244_1513811_-	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	csa3|112aa|up_3|NC_011999.1_1513980_1514316_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|206aa|up_2|NC_011999.1_1514335_1514953_-	pfam03596, Cad, Cadmium resistance transporter	NA|125aa|up_1|NC_011999.1_1515547_1515922_+	pfam07205, DUF1413, Domain of unknown function (DUF1413)	NA|32aa|up_0|NC_011999.1_1516058_1516154_-	NA	NA|501aa|down_0|NC_011999.1_1516541_1518044_-	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|69aa|down_1|NC_011999.1_1518287_1518494_+	NA	NA|71aa|down_2|NC_011999.1_1518574_1518787_+	NA	NA|199aa|down_3|NC_011999.1_1518834_1519431_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|398aa|down_4|NC_011999.1_1519557_1520751_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|284aa|down_5|NC_011999.1_1520822_1521674_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|195aa|down_6|NC_011999.1_1521673_1522258_-	pfam04011, LemA, LemA family	NA|418aa|down_7|NC_011999.1_1522326_1523580_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|783aa|down_8|NC_011999.1_1523914_1526263_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|556aa|down_9|NC_011999.1_1526348_1528016_-	PRK13505, PRK13505, formate--tetrahydrofolate ligase; Provisional
GCF_000010585.1_ASM1058v1	NC_011999	Macrococcus caseolyticus JCSC5402, complete genome	2	1575516-1575605	2	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,csa3	Orphan	TTGGCTCATGTTTATTTTTTATGAGCCA	28	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,DinG,csa3	NA,NA|287aa|down_9|NC_011999.1_1585488_1586349_+	NA|173aa|up_9|NC_011999.1_1566377_1566896_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|244aa|up_8|NC_011999.1_1567039_1567771_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|246aa|up_7|NC_011999.1_1567817_1568555_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|365aa|up_6|NC_011999.1_1568565_1569660_-	TIGR01526, nadR_NMN_Atrans, nicotinamide-nucleotide adenylyltransferase, NadR type	NA|186aa|up_5|NC_011999.1_1569954_1570512_-	pfam09515, Thia_YuaJ, Thiamine transporter protein (Thia_YuaJ)	NA|331aa|up_4|NC_011999.1_1570780_1571773_+	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|155aa|up_3|NC_011999.1_1571809_1572274_-	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|397aa|up_2|NC_011999.1_1572270_1573461_-	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|208aa|up_1|NC_011999.1_1573460_1574084_-	PRK09289, PRK09289, riboflavin synthase	NA|342aa|up_0|NC_011999.1_1574088_1575114_-	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|411aa|down_0|NC_011999.1_1575682_1576915_-	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|550aa|down_1|NC_011999.1_1576933_1578583_-	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|296aa|down_2|NC_011999.1_1578714_1579602_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|312aa|down_3|NC_011999.1_1579561_1580497_-	PRK13774, PRK13774, formimidoylglutamase; Provisional	NA|484aa|down_4|NC_011999.1_1580489_1581941_-	COG4529, COG4529, Uncharacterized protein conserved in bacteria [Function unknown]	NA|377aa|down_5|NC_011999.1_1582056_1583187_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|215aa|down_6|NC_011999.1_1583188_1583833_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|300aa|down_7|NC_011999.1_1583833_1584733_+	cd13608, PBP2_OpuCC_like, Substrate-binding protein OpuCC of ABC-type osmoregulatory transporter and related proteins; the type 2 periplasmic-binding protein fold	NA|231aa|down_8|NC_011999.1_1584732_1585425_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|287aa|down_9|NC_011999.1_1585488_1586349_+	NA
GCF_000010585.1_ASM1058v1	NC_011999	Macrococcus caseolyticus JCSC5402, complete genome	3	1843190-1843286	3	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,csa3	Orphan	TTTGTCCTCTTTCACTTGTCTAGGTGGCGGACTTCT	36	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,DinG,csa3	NA|121aa|up_6|NC_011999.1_1839076_1839439_-,NA|123aa|up_1|NC_011999.1_1841961_1842330_+,NA|165aa|down_0|NC_011999.1_1843307_1843802_-	NA|250aa|up_9|NC_011999.1_1836559_1837309_-	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|303aa|up_8|NC_011999.1_1837305_1838214_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|220aa|up_7|NC_011999.1_1838301_1838961_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|121aa|up_6|NC_011999.1_1839076_1839439_-	NA	NA|244aa|up_5|NC_011999.1_1839451_1840183_-	pfam11368, DUF3169, Protein of unknown function (DUF3169)	NA|68aa|up_4|NC_011999.1_1840179_1840383_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|118aa|up_3|NC_011999.1_1840580_1840934_-	TIGR04104, hypothetical_protein, cxxc_20_cxxc protein	NA|169aa|up_2|NC_011999.1_1841170_1841677_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|123aa|up_1|NC_011999.1_1841961_1842330_+	NA	NA|182aa|up_0|NC_011999.1_1842336_1842882_+	pfam15814, FAM199X, Protein family FAM199X	NA|165aa|down_0|NC_011999.1_1843307_1843802_-	NA	NA|205aa|down_1|NC_011999.1_1844013_1844628_+	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|540aa|down_2|NC_011999.1_1844802_1846422_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|95aa|down_3|NC_011999.1_1846481_1846766_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|252aa|down_4|NC_011999.1_1846978_1847734_+	pfam02517, Abi, CAAX protease self-immunity	NA|480aa|down_5|NC_011999.1_1847948_1849388_-	TIGR03708, poly_P_AMP_trns, polyphosphate:AMP phosphotransferase	NA|288aa|down_6|NC_011999.1_1851277_1852141_-	PRK10811, rne, ribonuclease E; Reviewed	NA|283aa|down_7|NC_011999.1_1852360_1853209_+	COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only]	NA|286aa|down_8|NC_011999.1_1853362_1854220_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|234aa|down_9|NC_011999.1_1854360_1855062_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
