assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000010485.1_ASM1048v1	NC_013654	Escherichia coli SE15, complete genome	1	728607-728748	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,RT,c2c9_V-U4,csa3	Orphan	GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	47	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,RT,c2c9_V-U4,csa3	NA|36aa|up_4|NC_013654.1_724828_724936_-,NA	NA|399aa|up_9|NC_013654.1_719269_720466_+	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus	NA|323aa|up_8|NC_013654.1_720493_721462_+	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold	NA|154aa|up_7|NC_013654.1_721521_721983_+	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism]	NA|437aa|up_6|NC_013654.1_721982_723293_+	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|428aa|up_5|NC_013654.1_723339_724623_-	PRK05614, gltA, citrate synthase	NA|36aa|up_4|NC_013654.1_724828_724936_-	NA	NA|135aa|up_3|NC_013654.1_725316_725721_+	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit	NA|116aa|up_2|NC_013654.1_725714_726062_+	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit	NA|589aa|up_1|NC_013654.1_726061_727828_+	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|239aa|up_0|NC_013654.1_727843_728560_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|934aa|down_0|NC_013654.1_728921_731723_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|406aa|down_1|NC_013654.1_731737_732955_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|389aa|down_2|NC_013654.1_733048_734215_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|290aa|down_3|NC_013654.1_734214_735084_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|241aa|down_4|NC_013654.1_735187_735910_-	PRK09764, PRK09764, GntR family transcriptional regulator	NA|639aa|down_5|NC_013654.1_736078_737995_+	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional	NA|878aa|down_6|NC_013654.1_738012_740646_+	PRK09819, PRK09819, mannosylglycerate hydrolase	NA|398aa|down_7|NC_013654.1_740843_742037_+	sd00006, TPR, Tetratricopeptide repeat	NA|523aa|down_8|NC_013654.1_743579_745148_+	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|380aa|down_9|NC_013654.1_745163_746303_+	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II
GCF_000010485.1_ASM1048v1	NC_013654	Escherichia coli SE15, complete genome	2	894815-894897	2	CRISPRCasFinder	no		DEDDh,DinG,cas3,RT,c2c9_V-U4,csa3	Orphan	AGTTCACTGCCGTACAGGCAGCT	23	0	0	NA	NA	I-F	1	1	Orphan	DEDDh,DinG,cas3,RT,c2c9_V-U4,csa3	NA,NA	NA|551aa|up_9|NC_013654.1_881305_882958_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_8|NC_013654.1_883101_884001_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_7|NC_013654.1_884415_885111_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_6|NC_013654.1_885535_887194_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|up_5|NC_013654.1_887190_888147_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_4|NC_013654.1_888297_889413_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|NC_013654.1_889409_891356_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|75aa|up_2|NC_013654.1_891428_891653_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_1|NC_013654.1_891975_892296_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|759aa|up_0|NC_013654.1_892326_894603_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|73aa|down_0|NC_013654.1_895287_895506_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NC_013654.1_895790_896495_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NC_013654.1_896536_898258_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NC_013654.1_898258_900025_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|322aa|down_4|NC_013654.1_900147_901113_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NC_013654.1_901656_902151_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1369aa|down_6|NC_013654.1_902285_906392_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|204aa|down_7|NC_013654.1_906550_907162_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NC_013654.1_907172_908516_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NC_013654.1_908606_909899_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
