The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	282435	355927	2685015	transposase,protease	Streptococcus_phage(33.33%)	57	NA	NA
WP_011274613.1|282435_283254_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011274614.1|283418_284027_+	NDxxF motif lipoprotein	NA	NA	NA	NA	NA
WP_011274615.1|284157_284976_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011274616.1|285131_285794_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011274617.1|285866_286499_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	28.0	1.3e-08
WP_011274618.1|286485_287259_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.4	2.6e-14
WP_011274619.1|287225_287993_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_011274620.1|287982_288942_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011274622.1|290641_291280_-	pyroglutamyl-peptidase I	NA	NA	NA	NA	NA
WP_011274623.1|291304_292231_-	DUF979 domain-containing protein	NA	NA	NA	NA	NA
WP_011274624.1|292223_292928_-	DUF969 domain-containing protein	NA	NA	NA	NA	NA
WP_011274625.1|293279_294656_+	MFS transporter	NA	NA	NA	NA	NA
WP_011274626.1|294707_295682_-	choloylglycine hydrolase family protein	NA	M1HS66	Paramecium_bursaria_Chlorella_virus	28.3	5.8e-27
WP_011274627.1|295734_296937_-	MFS transporter	NA	NA	NA	NA	NA
WP_011274628.1|297047_298010_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
WP_011274629.1|298286_299264_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_011274630.1|299522_301169_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	36.9	9.9e-96
WP_011274631.1|301573_302713_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_011274632.1|302926_304078_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_011274633.1|304164_304752_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011274634.1|304948_306724_+	oleate hydratase	NA	NA	NA	NA	NA
WP_011274635.1|306785_309044_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	32.7	1.6e-128
WP_011274636.1|309088_309874_-	arylamine N-acetyltransferase	NA	NA	NA	NA	NA
WP_011274637.1|310040_310676_-	ABC-2 transporter permease	NA	NA	NA	NA	NA
WP_011274638.1|310675_311521_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_011274639.1|311611_312328_-	DUF3169 family protein	NA	NA	NA	NA	NA
WP_011274640.1|312324_312528_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011274641.1|312672_313155_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_011274642.1|313310_314231_+	EamA family transporter	NA	NA	NA	NA	NA
WP_011274644.1|314592_315762_+	MFS transporter	NA	NA	NA	NA	NA
WP_011274645.1|315832_316396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011274646.1|316469_318011_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_011274647.1|318320_319280_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011274648.1|319556_320330_+	phosphonate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	7.1e-28
WP_011274649.1|320331_321132_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_016930613.1|321128_321956_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_011274651.1|322412_322790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011274424.1|322911_324228_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	5.4e-44
WP_011274653.1|325666_326149_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011274654.1|326803_337630_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_011274655.1|337818_339018_+	accessory Sec system protein translocase subunit SecY2	NA	NA	NA	NA	NA
WP_011274656.1|339027_340602_+	accessory Sec system protein Asp1	NA	NA	NA	NA	NA
WP_011274657.1|340591_342154_+	accessory Sec system protein Asp2	NA	NA	NA	NA	NA
WP_011274658.1|342137_342680_+	accessory Sec system protein Asp3	NA	NA	NA	NA	NA
WP_011274659.1|342672_345063_+	accessory Sec system translocase SecA2	NA	NA	NA	NA	NA
WP_011274660.1|345079_346588_+	accessory Sec system glycosyltransferase GtfA	NA	NA	NA	NA	NA
WP_041615060.1|346580_347918_+	accessory Sec system glycosylation chaperone GtfB	NA	NA	NA	NA	NA
WP_011274663.1|348247_349246_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_011274664.1|349249_349636_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011274665.1|349632_349902_-	response regulator	NA	NA	NA	NA	NA
WP_011274666.1|349923_350115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000195429.1|350365_351538_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_080366753.1|351802_352606_+	DUF4352 domain-containing protein	NA	NA	NA	NA	NA
WP_011274669.1|352673_353030_+	membrane protein	NA	NA	NA	NA	NA
WP_011274670.1|353104_353581_+	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
WP_011274671.1|353717_354557_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_011274424.1|354610_355927_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	5.4e-44
>prophage 2
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	947596	1022290	2685015	transposase,tRNA,protease,integrase	Staphylococcus_phage(21.74%)	68	942570:942586	1021823:1021839
942570:942586	attL	ATATATATTATGAAAAA	NA	NA	NA	NA
WP_011274424.1|947596_948913_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	5.4e-44
WP_011275256.1|948961_949603_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	28.8	2.1e-09
WP_011275257.1|949702_951187_-	cardiolipin synthase	NA	NA	NA	NA	NA
WP_011275258.1|951373_951667_+	copper-sensing transcriptional repressor CsoR	NA	NA	NA	NA	NA
WP_011275259.1|951678_951885_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_011275260.1|951992_952130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011275261.1|952426_954121_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	78.3	3.6e-242
WP_011275262.1|954078_955278_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_011275263.1|955695_956766_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_011275264.1|956781_958137_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_011275265.1|958407_959919_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.8	1.2e-58
WP_011275266.1|960084_960564_+	PH domain-containing protein	NA	NA	NA	NA	NA
WP_011275267.1|960556_962080_+	PH domain-containing protein	NA	NA	NA	NA	NA
WP_011275268.1|962072_962600_+	PH domain-containing protein	NA	NA	NA	NA	NA
WP_011275269.1|962609_962969_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_011275270.1|963064_964213_+	alanine racemase	NA	NA	NA	NA	NA
WP_011275271.1|964298_964469_+	type II toxin-antitoxin system antitoxin MazE	NA	NA	NA	NA	NA
WP_011275272.1|964465_964831_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	33.3	3.8e-08
WP_011275273.1|965138_966140_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_011275274.1|966238_966565_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_011275275.1|966566_967046_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_011275276.1|967020_967791_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.5	3.2e-20
WP_011275277.1|968040_970188_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_016931367.1|970180_970636_+	SprT family protein	NA	NA	NA	NA	NA
WP_011275279.1|977012_978725_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	78.3	3.6e-242
WP_011275280.1|978687_979956_-	threonine ammonia-lyase IlvA	NA	NA	NA	NA	NA
WP_011275281.1|979962_980538_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_011275282.1|980540_981911_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_011275283.1|981928_982969_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_011275284.1|982968_984501_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	36.7	1.2e-10
WP_011275285.1|984521_985526_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_011275286.1|985660_985903_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_011275287.1|985899_987675_-	biosynthetic-type acetolactate synthase large subunit	NA	E5EQ70	Micromonas_sp._RCC1109_virus	31.6	2.4e-71
WP_011275288.1|987693_989382_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_011275289.1|989878_990340_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_011275290.1|990320_990986_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_011275291.1|990958_991423_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_011275292.1|991415_992444_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.6	5.8e-62
WP_011275293.1|992826_994770_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2H4UUX5	Bodo_saltans_virus	28.6	4.5e-47
WP_011275294.1|995010_995649_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_011275295.1|995844_996942_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_011275296.1|996961_997186_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_011275297.1|997307_998552_+	ammonium transporter	NA	NA	NA	NA	NA
WP_011275298.1|998652_999612_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_011275299.1|999696_1001181_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.7	4.8e-17
WP_011275300.1|1001184_1002150_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_011275301.1|1002267_1002984_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	35.5	2.9e-28
WP_041615113.1|1003002_1004286_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_011275303.1|1004317_1004455_-	cyclic lactone autoinducer peptide	NA	NA	NA	NA	NA
WP_011275304.1|1004457_1005024_-	accessory gene regulator AgrB	NA	NA	NA	NA	NA
WP_011275305.1|1005753_1006539_-	carbon-nitrogen family hydrolase	NA	NA	NA	NA	NA
WP_011275306.1|1006731_1007355_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_041615115.1|1007540_1009226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011275308.1|1009287_1010028_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011275309.1|1010204_1010492_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	2.0e-12
WP_011275310.1|1010553_1012173_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.8	1.8e-158
WP_011275311.1|1012241_1013417_-|integrase	site-specific integrase	integrase	A0A2H4JBC4	uncultured_Caudovirales_phage	96.7	7.1e-213
WP_000195429.1|1013942_1015115_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_011275313.1|1015867_1016569_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_011275314.1|1016561_1017002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000195429.1|1017399_1018572_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_011275315.1|1018824_1019706_-	hypothetical protein	NA	A0A068A296	Staphylococcus_phage	90.8	1.2e-127
WP_011275316.1|1019733_1019937_+	hypothetical protein	NA	A0A068A231	Staphylococcus_phage	88.1	4.7e-24
WP_011275317.1|1020015_1020633_-	DUF4352 domain-containing protein	NA	NA	NA	NA	NA
WP_011275318.1|1020824_1020989_-	hypothetical protein	NA	A0A2H4JA11	uncultured_Caudovirales_phage	64.8	3.3e-12
WP_011275319.1|1021055_1021394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011275321.1|1021668_1021830_-	hypothetical protein	NA	A0A0N9S8N2	Staphylococcus_phage	83.0	1.4e-15
WP_011275322.1|1021888_1022290_-	sporulation protein	NA	A0A2H4JAR6	uncultured_Caudovirales_phage	96.2	1.3e-65
1021823:1021839	attR	TTTTTCATAATATATAT	NA	NA	NA	NA
>prophage 3
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	1142094	1179453	2685015	transposase,tRNA	Staphylococcus_phage(92.86%)	32	NA	NA
WP_011275433.1|1142094_1143489_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	62.2	1.1e-169
WP_011275434.1|1143490_1144498_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	52.9	5.0e-98
WP_011275435.1|1144494_1144731_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	75.9	6.4e-33
WP_011275436.1|1144797_1145271_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	57.7	2.9e-48
WP_011275437.1|1145251_1146022_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	67.1	4.3e-94
WP_011275438.1|1146086_1147679_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	87.0	4.7e-276
WP_011275440.1|1148069_1149266_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	87.4	1.9e-197
WP_011275441.1|1149359_1150268_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	80.2	2.1e-108
WP_011275442.1|1150546_1151383_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	74.7	6.3e-123
WP_011275443.1|1151447_1151801_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	30.8	5.0e-05
WP_011275444.1|1151797_1152163_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	59.3	6.9e-34
WP_011275445.1|1152255_1152561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011275446.1|1152824_1153538_+	transaldolase	NA	M1PR54	Cyanophage	35.0	5.0e-20
WP_011275447.1|1153758_1154229_+	membrane protein	NA	A0A2H4PQT8	Staphylococcus_phage	41.2	1.7e-16
WP_011275448.1|1154212_1154659_-	competence protein ComK	NA	NA	NA	NA	NA
WP_011275449.1|1154660_1155137_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	47.4	3.6e-30
WP_011275450.1|1155393_1155615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011275451.1|1155822_1156674_+	N-acetylglucosaminidase	NA	A0A1J0MFB0	Staphylococcus_phage	36.9	1.0e-35
WP_011275452.1|1156880_1158197_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	1.2e-43
WP_011275453.1|1158505_1159996_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	80.7	9.8e-18
WP_011275454.1|1160430_1161474_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	62.4	6.2e-128
WP_011275455.1|1161480_1162113_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	68.1	5.5e-79
WP_011275456.1|1162128_1163310_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	73.5	4.7e-172
WP_011275457.1|1163321_1163780_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	85.3	7.8e-59
WP_011275458.1|1163831_1164833_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	71.2	2.5e-134
WP_011275459.1|1165058_1165886_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011275461.1|1166896_1167457_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	72.4	3.3e-75
WP_011275462.1|1167453_1168413_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	85.4	1.0e-68
WP_011275463.1|1168523_1169711_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	79.2	3.9e-179
WP_011275464.1|1170009_1172424_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	86.2	0.0e+00
WP_011275465.1|1172444_1172756_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	72.8	3.7e-36
WP_011275466.1|1172982_1179453_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	A0A2H4PQU6	Staphylococcus_phage	29.6	2.0e-11
>prophage 4
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	1446277	1456132	2685015		uncultured_Mediterranean_phage(28.57%)	11	NA	NA
WP_011275715.1|1446277_1447165_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	30.7	3.6e-36
WP_011275716.1|1447267_1447789_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_011275717.1|1447882_1448614_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	24.4	1.2e-08
WP_011275718.1|1448606_1449146_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	31.2	1.2e-10
WP_011275719.1|1449142_1449880_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_011275720.1|1450031_1450757_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.3	4.1e-46
WP_011275721.1|1450737_1452495_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	32.3	3.7e-24
WP_011275723.1|1452834_1453377_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_002449743.1|1453448_1453697_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	49.3	5.8e-16
WP_011275724.1|1453806_1454760_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011275725.1|1454752_1456132_+	ATP-dependent DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	33.3	3.8e-56
>prophage 5
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	1648069	1715366	2685015	transposase,tRNA,protease	Staphylococcus_phage(23.53%)	56	NA	NA
WP_011275896.1|1648069_1649068_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_011275897.1|1649083_1650007_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011275898.1|1650299_1651973_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_011275899.1|1652125_1653625_-	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_000195429.1|1653839_1655012_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001028144.1|1655141_1656581_-	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_000393259.1|1656581_1656974_-	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_000195429.1|1657030_1658203_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_011275900.1|1658327_1659146_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	36.1	1.5e-31
WP_011275901.1|1659372_1659906_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_011275902.1|1659921_1661949_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	38.6	1.5e-53
WP_011275903.1|1661961_1664613_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	25.8	5.6e-40
WP_011275904.1|1664879_1665371_-	energy coupling factor transporter S component ThiW	NA	NA	NA	NA	NA
WP_011275905.1|1665392_1665758_-	RicAFT regulatory complex protein RicA family protein	NA	NA	NA	NA	NA
WP_011275906.1|1665758_1667303_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_011275907.1|1667601_1667898_-	thiamine-binding protein	NA	NA	NA	NA	NA
WP_011275908.1|1667958_1668570_-	poly-gamma-glutamate hydrolase family protein	NA	A0A0D3MVF0	Staphylococcus_phage	43.3	3.0e-42
WP_011275909.1|1668796_1669663_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA	NA
WP_011275910.1|1669663_1671424_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA	NA
WP_011275911.1|1671558_1672353_-	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA	NA
WP_011275912.1|1672511_1672727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011275913.1|1672998_1674558_-	ribonuclease Y	NA	NA	NA	NA	NA
WP_011275914.1|1674944_1675991_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	65.8	1.9e-124
WP_011275915.1|1676166_1677309_-	CinA family nicotinamide mononucleotide deamidase-related protein	NA	NA	NA	NA	NA
WP_011275916.1|1677463_1678039_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_011275917.1|1678072_1678465_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_016930681.1|1678486_1679317_-	YmfK family protein	NA	NA	NA	NA	NA
WP_011275919.1|1679489_1680194_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_011275920.1|1680193_1681483_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	22.1	1.4e-17
WP_011275921.1|1681482_1682757_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	27.1	2.7e-40
WP_011275922.1|1682782_1683499_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011275923.1|1683502_1685920_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.2	5.4e-82
WP_011275924.1|1686155_1687829_-	ribonuclease J	NA	NA	NA	NA	NA
WP_011275925.1|1688036_1690139_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_011275926.1|1690274_1690544_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_011275927.1|1690657_1691629_-	riboflavin biosynthesis protein RibF	NA	NA	NA	NA	NA
WP_011275928.1|1691643_1692561_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_011275929.1|1692898_1694215_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.3	1.6e-43
WP_011275930.1|1694286_1694637_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_011275931.1|1694798_1696949_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.0	1.1e-22
WP_011275932.1|1696953_1697271_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_011275933.1|1697267_1697552_-	YlxR family protein	NA	NA	NA	NA	NA
WP_011275934.1|1697577_1698810_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_011275935.1|1698830_1699298_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_011275936.1|1699466_1703783_-	DNA polymerase III subunit alpha	NA	A0A1X9I5C8	Streptococcus_phage	38.4	2.1e-20
WP_011275937.1|1704043_1705744_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011275938.1|1705762_1707049_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_011275939.1|1707259_1708042_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_011275940.1|1708045_1708816_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	45.2	4.6e-27
WP_011275941.1|1709041_1709596_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_011275942.1|1709613_1710336_-	UMP kinase	NA	NA	NA	NA	NA
WP_011275943.1|1710472_1711351_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_011275944.1|1711508_1712297_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_011275945.1|1712563_1713337_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_011275946.1|1713358_1714762_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	26.6	4.7e-30
WP_011275947.1|1714820_1715366_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
>prophage 6
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	1783656	1874039	2685015	transposase,tRNA,portal,terminase,capsid,head,integrase,holin,tail,protease	uncultured_Caudovirales_phage(49.12%)	100	1806792:1806851	1855730:1855840
WP_011276007.1|1783656_1786407_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	27.1	2.6e-88
WP_011276008.1|1786631_1787324_-	DivIVA domain-containing protein	NA	NA	NA	NA	NA
WP_011276009.1|1787366_1788194_-	RNA-binding protein	NA	NA	NA	NA	NA
WP_011276010.1|1788227_1788518_-	YggT family protein	NA	NA	NA	NA	NA
WP_011276011.1|1788530_1789124_-	cell division protein SepF	NA	NA	NA	NA	NA
WP_011276012.1|1789135_1789804_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_011276013.1|1789902_1790694_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_011276014.1|1790926_1792108_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_011276015.1|1792137_1793571_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_011276016.1|1793674_1795003_-	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA	NA
WP_011276017.1|1795018_1796368_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_011276018.1|1796369_1797335_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_011276019.1|1797627_1799946_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_011276020.1|1799926_1800328_-	cell division protein FtsL	NA	NA	NA	NA	NA
WP_011276021.1|1800341_1801277_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_011276022.1|1801291_1801723_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_011276023.1|1801864_1803478_-	bacillithiol biosynthesis cysteine-adding enzyme BshC	NA	NA	NA	NA	NA
WP_011276024.1|1803668_1804112_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_011276025.1|1804194_1804887_-	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA	NA
WP_011276026.1|1804997_1805132_-	phenol-soluble modulin PSM-beta-1	NA	NA	NA	NA	NA
WP_011276027.1|1805195_1805330_-	phenol-soluble modulin PSM-beta-2	NA	NA	NA	NA	NA
WP_011276028.1|1805386_1805521_-	phenol-soluble modulin PSM-beta-3	NA	NA	NA	NA	NA
WP_011276027.1|1805575_1805710_-	phenol-soluble modulin PSM-beta-2	NA	NA	NA	NA	NA
WP_011276028.1|1805769_1805904_-	phenol-soluble modulin PSM-beta-3	NA	NA	NA	NA	NA
1806792:1806851	attL	ATCCCTCCCAGGACGCTATTAACTAAAAATTACATATATTTTTAGGTTGAGAACGCTGTT	NA	NA	NA	NA
WP_041615168.1|1807060_1807459_-	hypothetical protein	NA	M9QRV7	Staphylococcus_phage	70.8	5.6e-53
WP_080004928.1|1807448_1808000_-	DUF4065 domain-containing protein	NA	M9QX37	Staphylococcus_phage	80.9	4.6e-82
WP_011276031.1|1808213_1809608_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4J4H5	uncultured_Caudovirales_phage	77.1	1.6e-216
WP_011276032.1|1809608_1809869_-|holin	phage holin	holin	A0A1W6JNV9	Staphylococcus_phage	67.0	1.9e-25
WP_011276033.1|1809919_1810318_-	hypothetical protein	NA	A0A2H4JAU6	uncultured_Caudovirales_phage	57.6	2.6e-34
WP_011276034.1|1810301_1810721_-	hypothetical protein	NA	A0A2H4JIB4	uncultured_Caudovirales_phage	65.5	1.0e-52
WP_011276035.1|1810757_1810907_-	hypothetical protein	NA	A0A2H4JHB0	uncultured_Caudovirales_phage	91.3	1.9e-14
WP_011276036.1|1810896_1813401_-|tail	phage tail protein	tail	U3PDY0	Staphylococcus_phage	47.5	5.4e-178
WP_011276037.1|1813414_1815226_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_148233671.1|1815237_1816059_-|tail	phage tail family protein	tail	A0A2H4J5C4	uncultured_Caudovirales_phage	66.1	3.9e-109
WP_011276039.1|1816073_1820537_-|tail	phage tail tape measure protein	tail	A0A2H4J8X5	uncultured_Caudovirales_phage	94.6	0.0e+00
WP_011276040.1|1820765_1821674_-	HNH endonuclease	NA	A0A060AKF4	Staphylococcus_phage	44.6	6.7e-54
WP_080004934.1|1821810_1823853_-|tail	phage tail tape measure protein	tail	A0A2H4J8X5	uncultured_Caudovirales_phage	98.7	1.4e-155
WP_017175428.1|1823949_1824105_-	hypothetical protein	NA	A0A2H4J5B6	uncultured_Caudovirales_phage	98.0	1.3e-21
WP_000160701.1|1824211_1825027_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000790709.1|1825019_1826462_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_000690636.1|1826433_1827027_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	5.0e-42
WP_001284656.1|1827290_1827671_-	penicillinase repressor BlaI	NA	NA	NA	NA	NA
WP_011276042.1|1827660_1829418_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA	NA
WP_000733283.1|1829524_1830370_+	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NA	A0A1B0VBP7	Salmonella_phage	34.0	1.5e-31
WP_011276043.1|1830705_1831068_-	hypothetical protein	NA	A0A2H4J5B3	uncultured_Caudovirales_phage	100.0	9.5e-60
WP_011276044.1|1831129_1831297_-	hypothetical protein	NA	A0A2H4JBT7	uncultured_Caudovirales_phage	92.7	9.8e-20
WP_011276045.1|1831310_1831952_-|tail	phage tail protein	tail	A0A2H4JAV6	uncultured_Caudovirales_phage	93.9	4.0e-109
WP_011276046.1|1831952_1832360_-	hypothetical protein	NA	A0A2H4JBV0	uncultured_Caudovirales_phage	97.0	3.3e-69
WP_011276047.1|1832356_1832779_-	HK97 gp10 family phage protein	NA	A0A2H4J781	uncultured_Caudovirales_phage	100.0	9.4e-75
WP_011276048.1|1832768_1833140_-|head,tail	head-tail adaptor protein	head,tail	A0A2H4J5E7	uncultured_Caudovirales_phage	99.2	1.7e-67
WP_011276049.1|1833129_1833426_-	hypothetical protein	NA	A0A2H4JFZ6	uncultured_Caudovirales_phage	99.0	2.8e-49
WP_011276050.1|1833443_1834622_-|capsid	phage major capsid protein	capsid	A0A2H4J5D0	uncultured_Caudovirales_phage	100.0	5.4e-221
WP_011276051.1|1834684_1835551_-|protease	Clp protease ClpP	protease	A0A2H4J8Y7	uncultured_Caudovirales_phage	81.9	2.8e-118
WP_011276052.1|1835543_1836689_-|portal	phage portal protein	portal	A0A2H4J5C5	uncultured_Caudovirales_phage	97.1	8.4e-211
WP_011276053.1|1836708_1838370_-|terminase	terminase large subunit	terminase	A0A2H4J5C2	uncultured_Caudovirales_phage	98.7	0.0e+00
WP_011276054.1|1838366_1838726_-	hypothetical protein	NA	A0A2H4JBX8	uncultured_Caudovirales_phage	83.2	4.9e-48
WP_011276055.1|1838937_1839264_-	HNH endonuclease	NA	A0A2H4JAW8	uncultured_Caudovirales_phage	89.8	3.5e-53
WP_011276056.1|1839381_1839825_-	hypothetical protein	NA	A0A2H4J3L6	uncultured_Caudovirales_phage	78.8	4.9e-58
WP_148233665.1|1839838_1841206_-	DEAD/DEAH box helicase family protein	NA	Q4ZD24	Staphylococcus_phage	85.0	3.3e-230
WP_011276058.1|1841198_1841477_-	VRR-NUC domain-containing protein	NA	Q4ZD25	Staphylococcus_phage	84.6	1.9e-39
WP_011276059.1|1841833_1844281_-	virulence-associated E family protein	NA	Q4ZD27	Staphylococcus_phage	87.7	0.0e+00
WP_011276060.1|1844295_1844433_-	DUF1514 family protein	NA	NA	NA	NA	NA
WP_011276062.1|1844677_1844887_-	hypothetical protein	NA	A0A2H4J7I2	uncultured_Caudovirales_phage	59.1	5.7e-17
WP_148233666.1|1844892_1845120_-	DUF1381 domain-containing protein	NA	A0A2H4J2G4	uncultured_Caudovirales_phage	64.7	3.6e-17
WP_011276064.1|1845116_1845335_-	hypothetical protein	NA	A0A0D4DD65	Staphylococcus_phage	97.2	7.8e-33
WP_011276065.1|1845341_1845500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276066.1|1845536_1845851_-	MazG-like family protein	NA	A0A1W6JP65	Staphylococcus_phage	96.2	9.1e-51
WP_041615175.1|1845851_1846334_-	hypothetical protein	NA	A0A1J0MFQ4	Staphylococcus_phage	71.9	2.2e-56
WP_011276068.1|1846333_1846573_-	hypothetical protein	NA	A1BUA9	Staphylococcus_virus	51.3	2.9e-09
WP_011276070.1|1847236_1847665_-	single-stranded DNA-binding protein	NA	H9A0L6	Staphylococcus_phage	89.9	2.0e-48
WP_041615177.1|1847661_1848327_-	ERF family protein	NA	Q4ZCA1	Staphylococcus_virus	81.9	1.3e-94
WP_041615179.1|1848319_1848547_-	DUF2483 family protein	NA	A1BTZ2	Staphylococcus_virus	74.3	1.2e-23
WP_011276073.1|1848518_1848794_-	hypothetical protein	NA	H9A0R3	Staphylococcus_phage	78.0	4.7e-19
WP_011276074.1|1848878_1849049_-	hypothetical protein	NA	A0A0D4DC52	Staphylococcus_phage	52.6	8.8e-08
WP_011276075.1|1849051_1849369_-	DUF771 domain-containing protein	NA	A0A2H4JAF6	uncultured_Caudovirales_phage	87.6	1.9e-48
WP_011276076.1|1849428_1849605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276077.1|1849766_1850306_-	ORF6C domain-containing protein	NA	A0A2H4J1Z3	uncultured_Caudovirales_phage	47.8	1.3e-25
WP_011276078.1|1850298_1851225_-	DUF3102 domain-containing protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	60.6	4.6e-50
WP_011276079.1|1851271_1851511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276081.1|1851687_1852479_-	phage antirepressor Ant	NA	A0A2H4J5J5	uncultured_Caudovirales_phage	79.8	3.2e-116
WP_009382133.1|1852478_1852673_-	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	89.1	1.1e-22
WP_011276082.1|1852952_1853291_+	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	59.1	1.6e-29
WP_011276083.1|1853304_1853976_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	44.8	2.2e-46
WP_011276084.1|1854057_1854585_+	Ltp family lipoprotein	NA	A0A1P8D5Q9	Corynebacterium_phage	55.3	6.8e-06
WP_011276085.1|1854642_1855668_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0D4DCG3	Staphylococcus_phage	98.5	1.4e-193
WP_011276086.1|1856164_1856674_-	metallophosphoesterase	NA	NA	NA	NA	NA
1855730:1855840	attR	ATCCCTCCCAGGACGCTATTAACTAAAAATTACATATATTTTTAGGTTGAGAACGCTGTTATGACGGCGTTCTTTTTATTTTGTCTTGTAATTAGATACCATAGAAACTAA	NA	NA	NA	NA
WP_011276087.1|1856673_1857255_-	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_011276088.1|1857271_1858072_-	glutamate racemase	NA	NA	NA	NA	NA
WP_011276089.1|1858247_1859096_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_011276090.1|1859095_1860862_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_011276091.1|1860986_1861601_-	succinate dehydrogenase cytochrome b558 subunit	NA	NA	NA	NA	NA
WP_033079890.1|1861982_1863770_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_011276093.1|1863867_1864182_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	48.5	6.0e-26
WP_011276094.1|1864380_1866732_-	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	38.9	6.7e-13
WP_011276095.1|1866741_1868451_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	26.3	3.9e-18
WP_011276096.1|1868525_1869047_-	CvpA family protein	NA	NA	NA	NA	NA
WP_011276097.1|1869047_1869314_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_011276098.1|1869594_1870527_+	ribonuclease HIII	NA	NA	NA	NA	NA
WP_011276099.1|1870578_1872981_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_011276100.1|1872980_1874039_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.8	5.1e-29
>prophage 7
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	1931374	2009039	2685015	transposase,protease	Streptococcus_phage(27.78%)	70	NA	NA
WP_011276158.1|1931374_1931941_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.3	4.7e-29
WP_011276159.1|1931940_1932972_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.5	1.7e-69
WP_011276160.1|1932964_1934449_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.6	7.7e-47
WP_011276161.1|1934427_1936617_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.4	3.1e-137
WP_011276162.1|1936609_1937281_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_011276163.1|1937282_1937543_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_011276164.1|1937542_1938247_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	42.9	1.6e-47
WP_029376687.1|1938250_1939375_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_011276166.1|1939361_1939844_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	46.0	8.0e-22
WP_011276167.1|1940055_1940913_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.8	1.7e-38
WP_011276170.1|1941998_1943699_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	78.3	3.6e-242
WP_011276171.1|1943717_1944863_-	nitric oxide dioxygenase	NA	NA	NA	NA	NA
WP_011276172.1|1945126_1945444_+	DUF5011 domain-containing protein	NA	NA	NA	NA	NA
WP_011276173.1|1945739_1946864_+	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA	NA
WP_011276174.1|1946863_1948852_+	cytochrome aa3 quinol oxidase subunit I	NA	NA	NA	NA	NA
WP_011276175.1|1948841_1949447_+	cytochrome aa3 quinol oxidase subunit III	NA	NA	NA	NA	NA
WP_011276176.1|1949443_1949734_+	cytochrome aa3 quinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_011276177.1|1949876_1950776_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA	NA
WP_000195429.1|1950919_1952092_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_011276178.1|1952170_1953346_-	serine hydrolase	NA	NA	NA	NA	NA
WP_011276179.1|1953804_1955061_+	LCP family protein	NA	NA	NA	NA	NA
WP_011276180.1|1955079_1955550_+	DUF2538 family protein	NA	NA	NA	NA	NA
WP_011276181.1|1955687_1956110_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011276182.1|1956362_1960448_+	glucosaminidase domain-containing protein	NA	Q4ZE13	Staphylococcus_virus	48.1	3.7e-51
WP_011275929.1|1960672_1961989_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.3	1.6e-43
WP_011276183.1|1962229_1962649_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_157042484.1|1962835_1963321_-	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_011276185.1|1963516_1964524_+	acyltransferase family protein	NA	NA	NA	NA	NA
WP_011276186.1|1964652_1965816_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_011276187.1|1965918_1966737_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_011276188.1|1966729_1967533_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_011276189.1|1967519_1969190_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_011276190.1|1969179_1970547_-	isochorismate synthase	NA	NA	NA	NA	NA
WP_011276191.1|1970726_1971665_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_011276192.1|1971763_1972318_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011276193.1|1972504_1972735_+	TM2 domain-containing protein	NA	NA	NA	NA	NA
WP_011276195.1|1972991_1973210_-	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_011276196.1|1973423_1974008_+	competence protein ComK	NA	NA	NA	NA	NA
WP_011276197.1|1974536_1975853_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.2	4.1e-44
WP_011276199.1|1976351_1976825_+	PH domain-containing protein	NA	A0A0D4DCT6	Staphylococcus_phage	64.8	5.1e-53
WP_011276200.1|1976895_1977471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076684686.1|1977540_1977642_+	Ltp family lipoprotein	NA	NA	NA	NA	NA
WP_011276201.1|1977689_1978679_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_011276202.1|1978879_1979056_+	DUF2187 family protein	NA	NA	NA	NA	NA
WP_011276203.1|1979072_1979675_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011276204.1|1979758_1981270_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_011276205.1|1981383_1982742_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_011276206.1|1982760_1984680_-	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	25.1	2.4e-08
WP_011276207.1|1984929_1985727_-	TerC family protein	NA	S5MAL1	Bacillus_phage	39.6	7.8e-30
WP_011276209.1|1986025_1987588_-	peptide chain release factor 3	NA	A0A1B0RXH7	Streptococcus_phage	28.9	2.0e-37
WP_011276210.1|1987588_1987843_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276211.1|1987832_1989317_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_011276212.1|1989732_1990908_+	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_029376686.1|1990885_1992082_+	MFS transporter	NA	NA	NA	NA	NA
WP_011276214.1|1992170_1992680_-	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_016931310.1|1992860_1993625_-	esterase family protein	NA	NA	NA	NA	NA
WP_011276216.1|1993911_1994997_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_011276217.1|1995120_1995891_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_011276218.1|1996216_1998061_-	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_011276219.1|1998070_1999456_-	magnesium transporter	NA	NA	NA	NA	NA
WP_011276220.1|1999477_2000341_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_011276221.1|2000337_2001147_-	NAD kinase	NA	NA	NA	NA	NA
WP_011276222.1|2001159_2001789_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_011276223.1|2001805_2002153_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276224.1|2002398_2002980_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_011276225.1|2003067_2003433_+	truncated hemoglobin	NA	NA	NA	NA	NA
WP_011276226.1|2003456_2004254_+	DsbA family protein	NA	NA	NA	NA	NA
WP_011276227.1|2004661_2006470_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	26.1	5.3e-50
WP_011276228.1|2006534_2007494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011275188.1|2007722_2009039_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.3	2.7e-43
>prophage 8
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	2122929	2137416	2685015	terminase,integrase	uncultured_Caudovirales_phage(63.16%)	21	2117673:2117691	2133973:2133991
2117673:2117691	attL	TATAGTGGAGACGGCGGGA	NA	NA	NA	NA
WP_011276348.1|2122929_2123502_-|terminase	terminase small subunit	terminase	A0A2H4JBF3	uncultured_Caudovirales_phage	97.4	1.1e-99
WP_011276349.1|2123512_2123842_-	hypothetical protein	NA	A0A2H4JEH8	uncultured_Caudovirales_phage	78.9	6.9e-41
WP_011276350.1|2123838_2124276_-	hypothetical protein	NA	A0A2H4JBD6	uncultured_Caudovirales_phage	87.5	1.9e-62
WP_011276351.1|2124330_2124540_-	hypothetical protein	NA	A0A2H4JHW4	uncultured_Caudovirales_phage	68.1	2.2e-16
WP_011276352.1|2124539_2125130_-	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	85.7	5.0e-90
WP_011276353.1|2125207_2125540_-	hypothetical protein	NA	A0A2H4JHK4	uncultured_Caudovirales_phage	98.2	9.3e-54
WP_011276355.1|2125956_2126601_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	66.0	5.2e-77
WP_011276356.1|2126606_2126957_-	hypothetical protein	NA	A0A2H4JBD4	uncultured_Caudovirales_phage	86.2	1.7e-53
WP_011276357.1|2127200_2128568_-	DNA primase family protein	NA	A0A2H4JBE3	uncultured_Caudovirales_phage	93.4	1.7e-250
WP_011276358.1|2128579_2129449_-	primase alpha helix C-terminal domain-containing protein	NA	A0A2H4JEH3	uncultured_Caudovirales_phage	97.9	1.6e-169
WP_011276359.1|2129537_2129843_-	DUF1474 family protein	NA	A0A2H4JB50	uncultured_Caudovirales_phage	82.2	3.9e-38
WP_011276360.1|2129857_2130061_-	hypothetical protein	NA	A0A2H4JHV9	uncultured_Caudovirales_phage	97.0	9.1e-28
WP_011276361.1|2130073_2130328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276362.1|2130329_2130533_-	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	75.0	2.6e-22
WP_011276363.1|2130536_2130737_-	hypothetical protein	NA	A0A2H4JD47	uncultured_Caudovirales_phage	92.4	6.9e-28
WP_011276364.1|2130749_2130968_-	helix-turn-helix transcriptional regulator	NA	B3GVX4	Streptococcus_phage	45.6	2.8e-06
WP_011276365.1|2131155_2132073_+	transcriptional regulator	NA	Q9AZH9	Lactococcus_phage	50.0	8.4e-12
WP_011276366.1|2132062_2133151_+|integrase	site-specific integrase	integrase	H0UST3	Bacillus_phage	43.8	3.4e-76
WP_148233672.1|2133170_2133881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276368.1|2134542_2135013_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	86.5	3.5e-70
2133973:2133991	attR	TATAGTGGAGACGGCGGGA	NA	NA	NA	NA
WP_011276369.1|2135037_2137416_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.1	6.2e-91
>prophage 9
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	2189006	2203175	2685015		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
WP_011276420.1|2189006_2189789_-	ATP-binding cassette domain-containing protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	29.6	1.4e-15
WP_011276421.1|2189785_2190745_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	72.0	5.7e-11
WP_011276422.1|2190734_2191703_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	88.5	1.7e-151
WP_011276423.1|2191952_2192921_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	94.7	1.4e-177
WP_011276424.1|2193048_2195154_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	94.0	0.0e+00
WP_011276425.1|2195116_2195515_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	75.8	1.9e-53
WP_011276426.1|2196303_2197188_+	DMT family transporter	NA	NA	NA	NA	NA
WP_011276427.1|2197193_2197694_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.8	1.7e-51
WP_011276428.1|2197994_2199500_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.7	1.9e-61
WP_011276429.1|2200412_2201339_+	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA	NA
WP_011276430.1|2201411_2201945_-	5'-3'-deoxyribonucleotidase	NA	A0A0A0PKY7	Bacillus_phage	39.0	8.0e-31
WP_011276431.1|2202119_2203175_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	27.2	2.5e-20
>prophage 10
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	2219380	2227528	2685015	transposase	Pandoravirus(12.5%)	9	NA	NA
WP_011276445.1|2219380_2220526_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	34.9	7.0e-24
WP_011276446.1|2220509_2221103_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	40.1	7.1e-36
WP_011276447.1|2221465_2222137_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.9	1.4e-64
WP_011276448.1|2222138_2222558_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	26.9	2.2e-07
WP_011276449.1|2222557_2223274_+	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	41.9	1.6e-50
WP_011276450.1|2223378_2223990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276451.1|2224040_2225030_-	glycosyltransferase family 2 protein	NA	A8CG95	Salmonella_phage	41.2	5.3e-60
WP_011274424.1|2225318_2226635_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	5.4e-44
WP_011276452.1|2226688_2227528_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	44.4	3.6e-62
>prophage 11
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	2303170	2397948	2685015	transposase,tRNA,portal,terminase,capsid,head,integrase,holin,plate,tail	Staphylococcus_phage(63.89%)	120	2302659:2302675	2324143:2324159
2302659:2302675	attL	TTATTTAAATGAATATA	NA	NA	NA	NA
WP_000195429.1|2303170_2304343_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_011276528.1|2305108_2305624_-	Na+/H+ antiporter subunit G	NA	NA	NA	NA	NA
WP_011276529.1|2305598_2305901_-	Na+/H+ antiporter Mnh2 subunit F	NA	NA	NA	NA	NA
WP_011276530.1|2305897_2306380_-	Na+/H+ antiporter Mnh2 subunit E	NA	NA	NA	NA	NA
WP_011276531.1|2306376_2307876_-	Na+/H+ antiporter Mnh2 subunit D	NA	NA	NA	NA	NA
WP_011276532.1|2307865_2308216_-	Na+/H+ antiporter Mnh2 subunit C	NA	NA	NA	NA	NA
WP_011276533.1|2308212_2308638_-	Na+/H+ antiporter Mnh2 subunit B	NA	NA	NA	NA	NA
WP_011276534.1|2308624_2311027_-	DUF4040 family protein	NA	NA	NA	NA	NA
WP_011276535.1|2311055_2311613_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	37.0	2.4e-25
WP_011276536.1|2311755_2311962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276537.1|2311996_2312218_+	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_011276538.1|2312519_2313446_+	DMT family transporter	NA	NA	NA	NA	NA
WP_011276539.1|2313595_2314522_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011276540.1|2314845_2315220_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_011274424.1|2315441_2316758_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	5.4e-44
WP_011276541.1|2316959_2317769_-	alpha/beta hydrolase	NA	A0A023W6C9	Mycobacterium_phage	27.1	4.7e-06
WP_011276542.1|2318045_2318762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276543.1|2318944_2319451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276544.1|2319604_2320399_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011276545.1|2320400_2321105_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011276546.1|2321203_2322157_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_049425988.1|2322460_2323327_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011276548.1|2323547_2324045_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_011276549.1|2324110_2324875_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
2324143:2324159	attR	TATATTCATTTAAATAA	NA	NA	NA	NA
WP_011276550.1|2324973_2325612_-	endonuclease III	NA	NA	NA	NA	NA
WP_011276551.1|2325696_2327358_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011276552.1|2327354_2327771_-	DUF1934 family protein	NA	NA	NA	NA	NA
WP_011276553.1|2328059_2328155_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_011276556.1|2330027_2330246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033080158.1|2330913_2331162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276560.1|2331510_2331606_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_011276561.1|2331748_2332519_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011276562.1|2332520_2333216_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.0	8.8e-38
WP_000438873.1|2333751_2335218_+	ABC-F type ribosomal protection protein Msr(A)	NA	A0A2I4R674	Erysipelothrix_phage	37.9	3.9e-67
WP_000196697.1|2335316_2336216_+	Mph(C) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
WP_011276563.1|2336826_2337363_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276564.1|2337376_2337958_-	TetR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011276565.1|2338162_2338741_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	1.4e-41
WP_011276566.1|2338871_2339480_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	33.3	8.9e-18
WP_011276567.1|2339616_2340402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276570.1|2340855_2341041_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_100479717.1|2341316_2341544_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_033080160.1|2341620_2341905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276574.1|2341907_2342207_-	DUF2089 family protein	NA	NA	NA	NA	NA
WP_011276577.1|2343167_2344337_+	MFS transporter	NA	NA	NA	NA	NA
WP_154391758.1|2344371_2344512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276578.1|2344920_2345109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_102989972.1|2345327_2345957_+	CadD family cadmium resistance transporter	NA	NA	NA	NA	NA
WP_011276580.1|2345974_2346322_+	helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	39.0	8.1e-16
WP_011276581.1|2346485_2347160_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	95.1	2.1e-121
WP_011276582.1|2347388_2347895_-	YwhD family protein	NA	NA	NA	NA	NA
WP_173354398.1|2347965_2349282_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	30.3	3.4e-22
WP_011276584.1|2349301_2349778_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011276585.1|2349893_2350430_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_011276586.1|2350676_2351612_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_011276587.1|2351741_2352182_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_041615209.1|2353152_2354634_-	SH3 domain-containing protein	NA	A0A2H4J3K5	uncultured_Caudovirales_phage	67.1	7.8e-201
WP_011276590.1|2354611_2355097_-|holin	phage holin	holin	A0A2H4JCH4	uncultured_Caudovirales_phage	60.9	2.9e-43
WP_011276591.1|2355149_2357537_-|plate	BppU family phage baseplate upper protein	plate	K7QMH5	Staphylococcus_phage	42.1	2.1e-126
WP_011276592.1|2357587_2359531_-	glucosaminidase domain-containing protein	NA	A0A1W6JQU5	Staphylococcus_phage	94.0	0.0e+00
WP_011276593.1|2359573_2359969_-	hypothetical protein	NA	A0A1W6JQP0	Staphylococcus_phage	84.7	1.0e-54
WP_049397030.1|2359952_2360387_-	hypothetical protein	NA	A0A1W6JQR9	Staphylococcus_phage	97.2	6.9e-73
WP_011276595.1|2360422_2360563_-	XkdX family protein	NA	A0A1W6JQM1	Staphylococcus_phage	95.7	2.6e-18
WP_011276596.1|2360546_2360891_-	hypothetical protein	NA	A0A1W6JQL0	Staphylococcus_phage	92.1	2.3e-55
WP_080004930.1|2360901_2362404_-|plate	BppU family phage baseplate upper protein	plate	A0A1W6JQL6	Staphylococcus_phage	95.0	1.3e-224
WP_011276598.1|2362400_2365067_-	hypothetical protein	NA	A0A1W6JQM0	Staphylococcus_phage	89.8	0.0e+00
WP_011276599.1|2365078_2366920_-|tail	phage tail protein	tail	A0A1W6JQJ9	Staphylococcus_phage	96.6	0.0e+00
WP_041615298.1|2366930_2367872_-|tail	phage tail family protein	tail	A0A1W6JQJ7	Staphylococcus_phage	98.4	1.6e-175
WP_011276601.1|2367885_2371098_-|terminase	terminase	terminase	A0A1W6JQL3	Staphylococcus_phage	96.5	5.5e-300
WP_041615300.1|2371102_2371393_-	hypothetical protein	NA	A0A1W6JQT4	Staphylococcus_phage	100.0	1.6e-46
WP_011276603.1|2371440_2371944_-	hypothetical protein	NA	A0A1W6JQN4	Staphylococcus_phage	100.0	3.2e-90
WP_011276604.1|2372008_2372548_-|tail	tail protein	tail	A0A1W6JQQ8	Staphylococcus_phage	95.5	1.3e-92
WP_011276605.1|2372550_2372973_-	DUF3168 domain-containing protein	NA	A0A1W6JQL1	Staphylococcus_phage	99.3	1.6e-74
WP_011276606.1|2372988_2373402_-	HK97 gp10 family phage protein	NA	A0A0N9BAY5	Staphylococcus_phage	76.6	1.0e-57
WP_011276607.1|2373394_2373724_-|head	phage head closure protein	head	A0A1W6JQK8	Staphylococcus_phage	99.1	7.3e-59
WP_011276608.1|2373716_2374031_-|head,tail	phage head-tail connector protein	head,tail	A0A1W6JQJ1	Staphylococcus_phage	97.1	8.0e-55
WP_011276609.1|2374030_2374324_-	Rho termination factor N-terminal domain-containing protein	NA	A0A1W6JQI6	Staphylococcus_phage	93.8	1.0e-43
WP_011276610.1|2374337_2375159_-|capsid	N4-gp56 family major capsid protein	capsid	A0A1W6JQK0	Staphylococcus_phage	100.0	5.0e-149
WP_011276611.1|2375180_2375771_-	phage scaffolding protein	NA	A0A1W6JQS5	Staphylococcus_phage	99.5	3.0e-87
WP_011276612.1|2375868_2376825_-|capsid	minor capsid protein	capsid	A0A2H4JC26	uncultured_Caudovirales_phage	75.1	9.4e-131
WP_041615214.1|2376769_2378206_-|portal	phage portal protein	portal	A0A1W6JQP9	Staphylococcus_phage	99.0	5.9e-278
WP_011276614.1|2378206_2379472_-|terminase	PBSX family phage terminase large subunit	terminase	A0A1W6JQK1	Staphylococcus_phage	99.8	2.1e-247
WP_011276615.1|2379455_2379836_-	DNA-binding protein	NA	A0A1W6JQJ3	Staphylococcus_phage	100.0	6.7e-64
WP_011276617.1|2380150_2380567_-	hypothetical protein	NA	A0A1W6JNN5	Staphylococcus_phage	89.1	3.8e-68
WP_011276618.1|2380563_2381016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011276619.1|2381017_2381197_-	DUF1514 family protein	NA	A0A0D4DCK3	Staphylococcus_phage	90.4	2.1e-15
WP_011276620.1|2381198_2381357_-	hypothetical protein	NA	A0A0D4DCF9	Staphylococcus_phage	96.2	3.2e-20
WP_011276621.1|2381349_2381562_-	DUF1381 domain-containing protein	NA	A0A1W6JQI3	Staphylococcus_phage	95.6	2.1e-27
WP_011276622.1|2381574_2381778_-	hypothetical protein	NA	A0A0D3MVJ6	Staphylococcus_phage	89.6	1.3e-26
WP_011276623.1|2381774_2382047_-	hypothetical protein	NA	A0A2H4J550	uncultured_Caudovirales_phage	79.5	2.5e-36
WP_011276624.1|2382086_2382509_-	dUTP diphosphatase	NA	A0A0D4DCX1	Staphylococcus_phage	92.9	1.8e-65
WP_041615216.1|2382509_2382794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041615302.1|2382786_2383008_-	hypothetical protein	NA	A1BU09	Staphylococcus_virus	48.5	3.8e-11
WP_011276627.1|2383178_2383577_-	hypothetical protein	NA	A0A2H4J9W1	uncultured_Caudovirales_phage	53.0	2.0e-34
WP_080004938.1|2383747_2384125_-	DUF3310 domain-containing protein	NA	A0A2H4J5G4	uncultured_Caudovirales_phage	62.6	8.4e-35
WP_011276629.1|2384207_2384768_-	hypothetical protein	NA	A0A1W6JNH3	Staphylococcus_phage	97.3	2.7e-101
WP_011276630.1|2384772_2384967_-	hypothetical protein	NA	A0A1W6JNG1	Staphylococcus_phage	96.9	4.2e-30
WP_011276631.1|2384966_2385371_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A2H4J5E6	uncultured_Caudovirales_phage	100.0	1.4e-72
WP_011276632.1|2385381_2385606_-	DUF3269 family protein	NA	H9A0S3	Staphylococcus_phage	89.0	6.3e-30
WP_011276633.1|2385605_2385767_-	hypothetical protein	NA	A0A2H4JD60	uncultured_Caudovirales_phage	82.4	4.1e-15
WP_011276634.1|2385760_2386531_-	ATP-binding protein	NA	A0A1W6JNE7	Staphylococcus_phage	98.4	2.1e-141
WP_011276635.1|2386543_2387320_-	phage protein	NA	A0A2H4JEZ8	uncultured_Caudovirales_phage	71.7	3.6e-104
WP_011276636.1|2387312_2388071_-	AP2 domain-containing protein	NA	A0A2I6PDA5	Staphylococcus_phage	53.5	8.1e-61
WP_011276637.1|2388076_2388307_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J5H7	uncultured_Caudovirales_phage	94.7	4.3e-34
WP_011276638.1|2388281_2388971_-	hypothetical protein	NA	A0A1W6JPR0	Staphylococcus_phage	80.1	4.3e-101
WP_011276639.1|2388982_2389528_-	hypothetical protein	NA	A0A0H4IPV5	Staphylococcus_phage	83.1	3.2e-83
WP_011276640.1|2389559_2390345_-	AAA family ATPase	NA	A0EWP9	Staphylococcus_virus	82.4	2.4e-116
WP_011276641.1|2390337_2390595_-	DUF2483 family protein	NA	A0A2H4J5F3	uncultured_Caudovirales_phage	94.1	1.8e-41
WP_011276642.1|2390569_2390818_-	hypothetical protein	NA	A0A1W6JND7	Staphylococcus_phage	86.6	1.3e-31
WP_041615225.1|2390873_2391065_-	DUF1270 family protein	NA	A0A1W6JND6	Staphylococcus_phage	85.7	4.1e-22
WP_011276644.1|2391221_2391434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276645.1|2391423_2391567_-	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	93.6	1.8e-14
WP_011276077.1|2391605_2392145_-	ORF6C domain-containing protein	NA	A0A2H4J1Z3	uncultured_Caudovirales_phage	47.8	1.3e-25
WP_011276646.1|2392137_2393067_-	DUF3102 domain-containing protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	72.3	1.8e-78
WP_173354400.1|2393308_2393473_-	hypothetical protein	NA	Q4ZDZ8	Staphylococcus_virus	82.0	4.2e-15
WP_011276648.1|2393486_2393726_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J3I3	uncultured_Caudovirales_phage	72.2	1.3e-25
WP_011276649.1|2393914_2394589_+	LexA family transcriptional regulator	NA	A0A1W6JPS3	Staphylococcus_phage	86.2	2.2e-110
WP_011276650.1|2394606_2394744_+	hypothetical protein	NA	A0A1W6JNG2	Staphylococcus_phage	82.2	3.5e-15
WP_011276651.1|2394907_2396293_+	recombinase family protein	NA	H9A0K0	Staphylococcus_phage	74.0	3.8e-197
WP_011276653.1|2397744_2397948_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.7	2.7e-19
>prophage 12
NC_007168	Staphylococcus haemolyticus JCSC1435, complete genome	2685015	2583857	2618339	2685015	terminase,transposase,integrase	uncultured_Caudovirales_phage(38.46%)	35	2613710:2613727	2623744:2623761
WP_011276817.1|2583857_2584127_-	hypothetical protein	NA	A0A2H4JBE4	uncultured_Caudovirales_phage	94.4	1.0e-42
WP_011276818.1|2584132_2584705_-|terminase	terminase small subunit	terminase	A0A2H4JBF3	uncultured_Caudovirales_phage	95.3	2.1e-98
WP_011276819.1|2584706_2585045_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JEH8	uncultured_Caudovirales_phage	82.1	8.9e-44
WP_011276820.1|2585041_2585491_-	hypothetical protein	NA	A0A2H4JBD6	uncultured_Caudovirales_phage	86.4	3.9e-63
WP_016931197.1|2585545_2585698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000195429.1|2586065_2587238_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000195429.1|2587875_2589048_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_011276823.1|2589110_2589563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000195429.1|2589662_2590835_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_011276824.1|2591132_2591300_+	hypothetical protein	NA	A0A2H4JD39	uncultured_Caudovirales_phage	66.7	8.9e-13
WP_011276827.1|2592133_2593348_+|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	46.1	1.4e-91
WP_011276828.1|2593513_2595055_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	7.2e-24
WP_011276829.1|2595228_2596695_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	39.0	2.7e-92
WP_011276830.1|2596733_2598002_-	purine permease	NA	NA	NA	NA	NA
WP_011276831.1|2597998_2598580_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011276832.1|2599158_2599566_+	general stress protein	NA	NA	NA	NA	NA
WP_011276833.1|2599714_2600383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276834.1|2600501_2601152_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276835.1|2601439_2602828_+	L-cystine transporter	NA	NA	NA	NA	NA
WP_011276836.1|2602911_2603667_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011276837.1|2603824_2604604_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
WP_011276838.1|2605024_2605594_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_011276839.1|2605608_2607132_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.4	7.1e-40
WP_011276840.1|2607470_2608097_+	NDxxF motif lipoprotein	NA	NA	NA	NA	NA
WP_011276841.1|2608196_2608775_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_011276842.1|2608798_2609428_-	LysE family translocator	NA	NA	NA	NA	NA
WP_016931184.1|2609874_2610108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276845.1|2612086_2612617_+	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	59.3	5.7e-53
WP_011276846.1|2612856_2613240_+	effector binding domain-containing protein	NA	NA	NA	NA	NA
2613710:2613727	attL	GACCATTCGACAAGTTTT	NA	NA	NA	NA
WP_000668388.1|2613806_2613953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011276848.1|2614147_2614243_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_011276849.1|2614436_2615096_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_011276850.1|2615341_2615944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000160701.1|2616088_2616904_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000790709.1|2616896_2618339_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
2623744:2623761	attR	AAAACTTGTCGAATGGTC	NA	NA	NA	NA
