The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_006361	Nocardia farcinica IFM 10152, complete genome	6021225	13976	50108	6021225	capsid,tail,terminase,portal,protease,integrase,head	Gordonia_phage(60.87%)	53	NA	NA
WP_011206538.1|13976_15173_-|integrase	site-specific integrase	integrase	A0A1D8EX55	Mycobacterium_phage	49.5	1.8e-91
WP_041559721.1|15224_15692_-	hypothetical protein	NA	A0A220NS36	Mycobacterium_phage	51.7	1.4e-34
WP_011206540.1|15777_16776_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011206541.1|16879_17077_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_157838316.1|17223_18150_+	phage antirepressor KilAC domain-containing protein	NA	A0A0U4K431	Gordonia_phage	45.7	1.6e-55
WP_011206543.1|18146_18413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206544.1|18409_18787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206545.1|18786_19038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206546.1|19034_19460_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206547.1|19482_19962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206548.1|20033_20546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206549.1|20542_20686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206550.1|20685_21753_+	hypothetical protein	NA	A0A222ZKP2	Mycobacterium_phage	35.0	6.8e-29
WP_106427457.1|21697_23305_+	AAA family ATPase	NA	A0A1U9WS32	Gordonia_phage	54.1	4.2e-123
WP_011206553.1|23301_23601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206554.1|23597_23774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157838317.1|23770_24016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206555.1|24019_24352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041560526.1|24825_25092_+	hypothetical protein	NA	A0A142K7J6	Mycobacterium_phage	50.0	7.6e-14
WP_011206557.1|25088_25352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206558.1|25348_25648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206559.1|25644_25902_+	hypothetical protein	NA	A0A166Y9S9	Gordonia_phage	35.1	1.2e-08
WP_011206560.1|25898_26138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157838318.1|26504_26720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206563.1|26716_26929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206564.1|26928_27309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041559728.1|27596_27794_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_011206567.1|27895_28384_+|terminase	phage terminase small subunit P27 family	terminase	A0A1B3B1V2	Gordonia_phage	65.8	1.4e-50
WP_011206568.1|28358_30107_+|terminase	terminase large subunit	terminase	A0A142KB32	Gordonia_phage	72.5	2.3e-244
WP_011206569.1|30119_30401_+	hypothetical protein	NA	W0LPT9	Mycobacterium_phage	46.6	3.2e-07
WP_011206570.1|30404_31676_+|portal	phage portal protein	portal	A0A142K7D9	Mycobacterium_phage	65.8	9.2e-158
WP_011206571.1|31672_32464_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1U9WRZ1	Gordonia_phage	60.7	3.1e-63
WP_106427593.1|32492_33800_+|capsid	phage major capsid protein	capsid	W0LJX9	Mycobacterium_phage	66.1	3.0e-148
WP_173363261.1|33868_34045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206574.1|34045_34588_+	hypothetical protein	NA	A0A2H4P9V1	Gordonia_phage	38.1	2.7e-18
WP_041559729.1|34584_34890_+	hypothetical protein	NA	A0A2H4P9W7	Gordonia_phage	53.5	3.0e-22
WP_011206576.1|34889_35141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206577.1|35137_35545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206578.1|35578_36115_+	hypothetical protein	NA	A0A2H4PA04	Gordonia_phage	43.2	1.5e-32
WP_011206579.1|36199_36559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157838319.1|36450_36957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011206580.1|36971_40532_+|tail	phage tail	tail	A0A2H4P9V9	Gordonia_phage	44.6	7.1e-83
WP_106427594.1|40660_41428_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_106427595.1|41457_43053_+|tail	phage tail protein	tail	A0A160DF08	Gordonia_phage	40.9	8.6e-113
WP_011206583.1|43063_44125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157838320.1|44124_45204_+	hypothetical protein	NA	G9FHL2	Rhodococcus_virus	49.1	9.6e-07
WP_011206585.1|45200_46256_+	hypothetical protein	NA	A0A1B3AYX1	Gordonia_phage	27.5	3.9e-13
WP_011206586.1|46252_46891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206587.1|46883_47696_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1I9S8J3	Mycobacterium_phage	69.1	1.3e-67
WP_011206588.1|47692_47908_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206589.1|47904_48354_+	hypothetical protein	NA	A0A1B3AY97	Gordonia_phage	34.5	1.8e-15
WP_011206590.1|48346_48694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206591.1|48686_50108_+	hypothetical protein	NA	A0A0K0N7D7	Gordonia_phage	53.8	2.7e-25
>prophage 2
NC_006361	Nocardia farcinica IFM 10152, complete genome	6021225	248378	255879	6021225	integrase	Gordonia_phage(50.0%)	13	248317:248341	260185:260209
248317:248341	attL	GTTCAAATCCCTCCGCCACCGCCAC	NA	NA	NA	NA
WP_050768201.1|248378_249548_-|integrase	site-specific integrase	integrase	A0A0E3XBN7	Gordonia_phage	41.1	3.8e-73
WP_106427461.1|249534_250044_-	helix-turn-helix transcriptional regulator	NA	A0A2H4PE70	Mycobacterium_phage	38.3	3.0e-19
WP_106427462.1|250167_250365_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_041559752.1|250457_250829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206772.1|250828_251113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041559753.1|251182_251461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081433267.1|251592_252912_+	AAA family ATPase	NA	A0A088FQ90	Mycobacterium_phage	33.2	1.1e-33
WP_011206775.1|252911_253298_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011206776.1|253302_253680_+	DUF2190 family protein	NA	A0A0K0N6K0	Gordonia_phage	41.6	1.7e-14
WP_011206777.1|253691_253877_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206778.1|253902_254679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011206779.1|254678_254963_+	HNH endonuclease	NA	A0A0R6PH58	Moraxella_phage	55.6	1.0e-08
WP_157838322.1|255207_255879_+	hypothetical protein	NA	A0A142KC72	Gordonia_phage	41.0	4.9e-17
260185:260209	attR	GTTCAAATCCCTCCGCCACCGCCAC	NA	NA	NA	NA
>prophage 3
NC_006361	Nocardia farcinica IFM 10152, complete genome	6021225	1670676	1693975	6021225	capsid,tail,terminase,portal,transposase	Gordonia_phage(61.54%)	27	NA	NA
WP_011208039.1|1670676_1671897_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1C9LZZ3	Mycobacterium_phage	95.1	4.3e-221
WP_011208040.1|1672001_1672331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208041.1|1672624_1673275_+	hypothetical protein	NA	G9FH23	Rhodococcus_phage	51.1	1.4e-40
WP_041559957.1|1673383_1673602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208043.1|1673771_1674026_+	hypothetical protein	NA	A0A1B3B1Z1	Gordonia_phage	56.0	7.4e-19
WP_041559958.1|1674140_1674416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041559959.1|1674703_1674973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081433167.1|1675137_1675305_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_011208047.1|1675322_1676468_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	I4AZM3	Saccharomonospora_phage	59.6	9.6e-98
WP_011208048.1|1676484_1676934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208051.1|1678155_1678695_+	hypothetical protein	NA	A0A1C9EHY3	Gordonia_phage	45.8	3.3e-24
WP_041559961.1|1678681_1679746_+	hypothetical protein	NA	A0A1C9EHW4	Gordonia_phage	61.9	3.0e-130
WP_011208053.1|1679723_1680326_+|terminase	terminase	terminase	A0A1C9EHV3	Gordonia_phage	63.4	1.2e-67
WP_106427641.1|1680336_1681779_+|portal	phage portal protein	portal	A0A2H4JAT8	uncultured_Caudovirales_phage	36.4	5.9e-60
WP_011208055.1|1681778_1683710_+	hypothetical protein	NA	A0A1C9EHV4	Gordonia_phage	49.3	2.5e-21
WP_011208056.1|1683774_1684314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208057.1|1684337_1684706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106427642.1|1684724_1685750_+|capsid	major capsid protein	capsid	A0A0K1Y5W3	Streptomyces_phage	37.0	1.9e-52
WP_041559963.1|1685749_1686025_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208060.1|1686011_1686407_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208061.1|1686403_1686796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208062.1|1686799_1686997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081433287.1|1687101_1687347_+	hypothetical protein	NA	A0A1C9EHV8	Gordonia_phage	43.8	1.7e-07
WP_011208064.1|1687343_1687784_+	hypothetical protein	NA	A0A1C9EI09	Gordonia_phage	38.2	5.8e-19
WP_011208066.1|1688650_1689085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208067.1|1689081_1689486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011208068.1|1689490_1693975_+|tail	phage tail tape measure protein	tail	A0A166XZ24	Gordonia_phage	31.2	3.1e-99
>prophage 4
NC_006361	Nocardia farcinica IFM 10152, complete genome	6021225	4133155	4154596	6021225	terminase,portal	Mycobacterium_phage(47.06%)	32	NA	NA
WP_011210463.1|4133155_4134790_-|portal	phage portal protein	portal	A0A1J0MBZ7	Streptomyces_phage	40.9	1.8e-89
WP_011210464.1|4134848_4135991_-	hypothetical protein	NA	G8I4E6	Mycobacterium_phage	46.3	7.6e-95
WP_011210465.1|4135987_4136239_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210466.1|4136308_4137619_-|terminase	PBSX family phage terminase large subunit	terminase	A0A1J0MC69	Streptomyces_phage	55.1	3.8e-122
WP_011210467.1|4137615_4138149_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_157838414.1|4138193_4138361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041560287.1|4138436_4138676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011210471.1|4138906_4139062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210472.1|4139077_4139356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210473.1|4139339_4139561_-	hypothetical protein	NA	G1BSE0	Mycobacterium_virus	54.7	7.4e-07
WP_106427548.1|4139575_4139845_-	hypothetical protein	NA	M9MUD8	Rhodococcus_phage	57.7	3.9e-18
WP_011210475.1|4139811_4140054_-	glutaredoxin family protein	NA	A0A2H4J2C2	uncultured_Caudovirales_phage	47.8	4.6e-10
WP_157838415.1|4140053_4140221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210476.1|4140217_4141201_-	PE-PPE domain-containing protein	NA	NA	NA	NA	NA
WP_011210477.1|4141564_4142413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041560288.1|4142894_4143101_-	hypothetical protein	NA	G8I4P7	Mycobacterium_phage	79.1	1.9e-25
WP_050768121.1|4143429_4143705_-	hypothetical protein	NA	G1DUC7	Mycobacterium_virus	46.4	2.7e-14
WP_011210479.1|4144216_4144906_-	hypothetical protein	NA	A0A2D1GDS2	Mycobacterium_phage	64.5	1.6e-76
WP_157838417.1|4144902_4145721_-	methyltransferase	NA	A0A0F6YNR1	Sinorhizobium_phage	50.0	1.7e-64
WP_011210481.1|4145729_4146323_-	hypothetical protein	NA	A0A142EZY1	Stenotrophomonas_phage	59.6	6.9e-07
WP_011210482.1|4146319_4146586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173363271.1|4146582_4147722_-	phage Gp37/Gp68 family protein	NA	A0A088F7U1	Mycobacterium_phage	59.2	1.7e-99
WP_011210485.1|4147915_4148485_-	hypothetical protein	NA	A0A068F1Q8	Mycobacterium_phage	52.6	5.5e-38
WP_011210486.1|4148484_4149435_-	AAA family ATPase	NA	A0A173G9T1	Mycobacterium_phage	43.7	9.8e-56
WP_011210487.1|4149431_4149704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210488.1|4149700_4150984_-	hypothetical protein	NA	V5R7R6	Mycobacterium_phage	51.1	1.3e-119
WP_011210489.1|4151017_4151800_-	hypothetical protein	NA	S5Y4W9	Mycobacterium_phage	38.4	5.1e-42
WP_011210490.1|4151796_4152066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210491.1|4152062_4152275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157838418.1|4152549_4152726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041560292.1|4152713_4152986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210495.1|4153000_4154596_-	TROVE domain-containing protein	NA	A0A1J0GW83	Streptomyces_phage	42.5	4.3e-104
>prophage 5
NC_006361	Nocardia farcinica IFM 10152, complete genome	6021225	4180618	4195492	6021225		Mycobacterium_phage(30.77%)	24	NA	NA
WP_070108891.1|4180618_4181002_-	DUF3310 domain-containing protein	NA	A0A0M5M5K1	Mycobacterium_phage	55.9	1.3e-11
WP_011210557.1|4181100_4181310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210559.1|4181413_4181773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210560.1|4181784_4182018_-	hypothetical protein	NA	A0A2D1AE59	Rhodococcus_phage	57.1	2.5e-05
WP_011210561.1|4182014_4182788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210562.1|4182784_4182997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210563.1|4182993_4183638_-	hypothetical protein	NA	A0A2P1N2S3	Gordonia_phage	54.9	5.0e-19
WP_157838425.1|4183634_4183910_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157838426.1|4183977_4184220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041560298.1|4184738_4184927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011210566.1|4184982_4185648_-	site-specific DNA-methyltransferase	NA	Q855N6	Mycobacterium_virus	63.1	4.0e-72
WP_011210567.1|4185656_4185914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210568.1|4185910_4186426_-	hypothetical protein	NA	A0A166Y0E3	Gordonia_phage	66.2	2.0e-55
WP_011210569.1|4186422_4187229_-	hypothetical protein	NA	E0YQ62	Mycobacterium_phage	36.2	9.3e-15
WP_011210570.1|4187225_4189004_-	DNA cytosine methyltransferase	NA	A0A142KCP3	Gordonia_phage	33.0	3.8e-53
WP_011210571.1|4189190_4189601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210572.1|4189597_4190155_-	hypothetical protein	NA	G9FH62	Rhodococcus_phage	51.0	3.9e-36
WP_011210573.1|4190151_4191084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210574.1|4191086_4191842_-	hypothetical protein	NA	G9FH02	Rhodococcus_phage	37.2	3.8e-26
WP_011210575.1|4191838_4192684_-	hypothetical protein	NA	G9FH02	Rhodococcus_phage	36.3	5.5e-26
WP_050768305.1|4192680_4193355_-	3'-5' exonuclease	NA	A0A0R8VDA1	Thermobifida_phage	44.5	1.9e-45
WP_011210577.1|4193366_4193570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011210578.1|4193573_4194461_-	recombination protein RecT	NA	A0A097EYQ8	Mycobacterium_phage	53.5	4.8e-81
WP_157838427.1|4194460_4195492_-	YqaJ viral recombinase family protein	NA	A0A1I9SCA2	Mycobacterium_phage	42.0	1.0e-53
