The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_005139	Vibrio vulnificus YJ016 chromosome I, complete sequence	3354505	540195	548284	3354505	tRNA,transposase,integrase	Vibrio_phage(33.33%)	7	530736:530750	550864:550878
530736:530750	attL	AAAGCGGTTGATTTT	NA	NA	NA	NA
WP_167524320.1|540195_540892_+|transposase	IS1 family transposase	transposase	A0A0U2RK18	Escherichia_phage	51.7	9.1e-67
WP_011149473.1|540908_542138_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1V0E8G8	Vibrio_phage	47.9	5.3e-110
WP_011078714.1|542524_544399_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	32.2	3.2e-34
WP_026130526.1|544498_546262_-	DNA primase	NA	A0A1S5RFR1	Helicobacter_phage	29.0	1.5e-44
WP_011078712.1|546348_546792_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	46.6	2.9e-26
WP_001145625.1|546820_547036_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_011078711.1|547264_548284_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.9	4.8e-109
550864:550878	attR	AAAGCGGTTGATTTT	NA	NA	NA	NA
>prophage 2
NC_005139	Vibrio vulnificus YJ016 chromosome I, complete sequence	3354505	760665	767720	3354505		Faustovirus(16.67%)	9	NA	NA
WP_011149600.1|760665_761880_+	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	31.6	2.2e-31
WP_011078536.1|761923_762307_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	77.4	2.0e-52
WP_011149601.1|762379_762703_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.3	1.8e-25
WP_011149602.1|762763_763279_+	co-chaperone HscB	NA	NA	NA	NA	NA
WP_011149603.1|763300_765154_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	39.0	6.3e-107
WP_011078532.1|765165_765504_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_011078531.1|765585_765780_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_011078530.1|765932_767231_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	32.8	6.5e-34
WP_011078529.1|767294_767720_+	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	41.4	5.1e-20
>prophage 3
NC_005139	Vibrio vulnificus YJ016 chromosome I, complete sequence	3354505	863122	869830	3354505		Staphylococcus_phage(50.0%)	7	NA	NA
WP_011149676.1|863122_864262_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.7	1.6e-65
WP_080505638.1|864274_865543_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.2	1.8e-100
WP_011149678.1|865743_866193_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_011149679.1|866212_867319_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	33.3	5.5e-42
WP_011078426.1|867320_867977_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	35.9	1.2e-33
WP_043877087.1|868074_869184_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	40.4	3.0e-64
WP_011078424.1|869359_869830_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	2.2e-32
>prophage 4
NC_005139	Vibrio vulnificus YJ016 chromosome I, complete sequence	3354505	2860181	2875429	3354505	tRNA	uncultured_Mediterranean_phage(22.22%)	14	NA	NA
WP_011151142.1|2860181_2862764_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	2.9e-78
WP_011151143.1|2862943_2863405_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_011079524.1|2863508_2864558_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.1	1.4e-111
WP_011151145.1|2864691_2865195_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	43.9	1.4e-24
WP_043877315.1|2865278_2867840_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	22.2	1.0e-30
WP_011151147.1|2867915_2868908_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.8	1.5e-35
WP_039554645.1|2868988_2869885_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV79	Clostridium_phage	34.1	1.5e-13
WP_011079519.1|2869928_2870555_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.6	2.1e-38
WP_011151150.1|2870557_2871325_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.0	6.9e-68
WP_026130623.1|2871330_2872374_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_011151152.1|2872415_2872892_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_011151153.1|2872888_2873602_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_011079514.1|2873601_2873883_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_013571121.1|2874127_2875429_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	58.9	4.7e-133
>prophage 1
NC_005140	Vibrio vulnificus YJ016 chromosome II, complete sequence	1857073	918830	973560	1857073	terminase,integrase,holin	Vibrio_phage(43.33%)	49	947790:947807	969228:969245
WP_043877517.1|918830_931892_-	PLxRFG domain-containing protein	NA	A0A240F4T3	Ochrobactrum_phage	29.2	0.0e+00
WP_011152141.1|932009_933530_-	hypothetical protein	NA	M4MHC7	Vibrio_phage	35.4	7.6e-42
WP_043877651.1|933529_933769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152143.1|933772_934201_-	hypothetical protein	NA	A0A1I9KFD7	Aeromonas_phage	47.5	3.3e-19
WP_011152144.1|934205_934862_-	hypothetical protein	NA	A0A1I9KFE8	Aeromonas_phage	44.2	7.1e-37
WP_011152145.1|934862_935291_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152147.1|935262_935832_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152148.1|935848_937081_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152149.1|937077_940047_-	DUF1983 domain-containing protein	NA	A0A1I9KGC4	Aeromonas_phage	54.0	3.0e-34
WP_193343218.1|940046_941654_-	hypothetical protein	NA	A0A1I9KFD2	Aeromonas_phage	45.7	5.4e-131
WP_011152151.1|941717_942620_-	hypothetical protein	NA	A0A2I7RR76	Vibrio_phage	41.1	1.4e-54
WP_011152152.1|942616_946090_-	hypothetical protein	NA	M4M9Z4	Vibrio_phage	34.5	6.5e-121
WP_011152153.1|946089_946719_-	hypothetical protein	NA	Q08J85	Stx2-converting_phage	32.9	1.9e-23
WP_011152154.1|946718_947315_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152155.1|947317_947767_-	hypothetical protein	NA	A0A2R2Z354	Escherichia_phage	46.6	9.4e-25
947790:947807	attL	GGGGCGTCTAGACGCCCC	NA	NA	NA	NA
WP_011152156.1|947827_948208_-	hypothetical protein	NA	M4MCI2	Vibrio_phage	35.8	1.6e-09
WP_011152157.1|948228_949434_-	DUF4043 family protein	NA	A0A2L1IV46	Escherichia_phage	55.6	2.4e-123
WP_193343219.1|949500_950526_-	ATPase	NA	A0A2L1IV47	Escherichia_phage	33.3	2.1e-27
WP_011152159.1|950648_951239_-	hypothetical protein	NA	A0A2I7RB79	Vibrio_phage	50.4	1.6e-27
WP_039507672.1|951323_951506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152162.1|951585_951744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043877518.1|951755_952274_-	glycoside hydrolase family 108 protein	NA	H9C0H1	Vibrio_phage	60.9	9.8e-58
WP_026130473.1|952433_952739_-|holin	phage holin family protein	holin	R9TR41	Vibrio_phage	44.2	1.5e-18
WP_043877519.1|952867_954955_-	hypothetical protein	NA	A0A1U9AJF2	Stx1_converting_phage	58.8	2.8e-204
WP_011152166.1|954954_956652_-|terminase	terminase	terminase	A0A1I9KFB6	Aeromonas_phage	64.5	2.7e-221
WP_011152167.1|956644_957496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152169.1|957873_959052_-|integrase	site-specific integrase	integrase	A0A067ZJC5	Vibrio_phage	40.0	1.8e-75
WP_017789209.1|959052_959217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152171.1|959206_960016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011152173.1|960260_960722_-	VRR-NUC domain-containing protein	NA	M4SRS1	Psychrobacter_phage	33.6	2.1e-11
WP_155116722.1|960718_961741_-	DUF968 domain-containing protein	NA	R9TRM9	Vibrio_phage	39.7	4.4e-62
WP_011152175.1|962216_963260_-	hypothetical protein	NA	A0A2I7QZV1	Vibrio_phage	42.0	4.6e-22
WP_011152177.1|963664_963919_-	helix-turn-helix domain-containing protein	NA	A0A0M3LQ90	Mannheimia_phage	50.7	2.0e-11
WP_011152178.1|964080_964725_+	LexA family transcriptional regulator	NA	K7PK07	Enterobacteria_phage	35.3	3.4e-28
WP_011152179.1|965080_965269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043877520.1|965278_965830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011152181.1|965795_966323_+	PadR family transcriptional regulator	NA	H9EB19	Vibrio_phage	32.0	2.0e-13
WP_011152182.1|966337_966979_+	AAA family ATPase	NA	J9Q7R7	Salmonella_phage	29.4	2.0e-15
WP_043877521.1|966978_967260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011152184.1|967271_967490_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_011152185.1|967486_968422_+	hypothetical protein	NA	A0A2I7R7C8	Vibrio_phage	27.0	7.0e-06
WP_017789197.1|968794_969220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011152189.1|969264_970263_+	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	52.0	6.0e-88
969228:969245	attR	GGGGCGTCTAGACGCCCC	NA	NA	NA	NA
WP_011152190.1|970358_970844_+	AP2 domain-containing protein	NA	NA	NA	NA	NA
WP_011152191.1|971057_971396_+	hypothetical protein	NA	A0A240F4V4	Ochrobactrum_phage	46.0	2.1e-21
WP_011152192.1|971395_971578_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_043877522.1|971852_972140_+	restriction alleviation protein, Lar family	NA	NA	NA	NA	NA
WP_011152193.1|972151_972310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039546560.1|973170_973560_+	hypothetical protein	NA	A0A2K8HWN7	Pseudomonas_phage	56.5	4.5e-31
