assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000009165.1_ASM916v1	NC_007508	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	1	1646352-1646433	1	CRISPRCasFinder	no		cas3,WYL,DEDDh,csa3,DinG	Orphan	GCTTTTCCGGGTCCCGGGTCCCG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,csa3,DinG	NA|150aa|up_3|NC_007508.1_1640075_1640525_-,NA|64aa|down_4|NC_007508.1_1650848_1651040_+	NA|518aa|up_9|NC_007508.1_1633800_1635354_-	pfam13372, Alginate_exp, Alginate export	NA|121aa|up_8|NC_007508.1_1635726_1636089_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|306aa|up_7|NC_007508.1_1636085_1637003_+	pfam13796, Sensor, Putative sensor	NA|448aa|up_6|NC_007508.1_1637131_1638475_-	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|201aa|up_5|NC_007508.1_1638748_1639351_-	pfam08242, Methyltransf_12, Methyltransferase domain	NA|149aa|up_4|NC_007508.1_1639424_1639871_+	pfam03653, UPF0093, Uncharacterized protein family (UPF0093)	NA|150aa|up_3|NC_007508.1_1640075_1640525_-	NA	NA|252aa|up_2|NC_007508.1_1640614_1641370_-	COG4700, COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown]	NA|320aa|up_1|NC_007508.1_1641427_1642387_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|1197aa|up_0|NC_007508.1_1642570_1646161_-	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|429aa|down_0|NC_007508.1_1647119_1648406_-	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed	NA|264aa|down_1|NC_007508.1_1648435_1649227_-	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA|153aa|down_2|NC_007508.1_1649252_1649711_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|338aa|down_3|NC_007508.1_1649707_1650721_-	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional	NA|64aa|down_4|NC_007508.1_1650848_1651040_+	NA	NA|789aa|down_5|NC_007508.1_1651116_1653483_-	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein	NA|449aa|down_6|NC_007508.1_1653566_1654913_-	PRK10779, PRK10779, sigma E protease regulator RseP	NA|397aa|down_7|NC_007508.1_1654939_1656130_-	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional	NA|276aa|down_8|NC_007508.1_1656132_1656960_-	pfam01148, CTP_transf_1, Cytidylyltransferase family	NA|253aa|down_9|NC_007508.1_1656956_1657715_-	PRK14836, PRK14836, undecaprenyl pyrophosphate synthase; Provisional
GCF_000009165.1_ASM916v1	NC_007508	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	2	1794712-1794832	1	PILER-CR	no	csa3	cas3,WYL,DEDDh,csa3,DinG	Type I-A	CATCGCCGGAACCCAC	16	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,DEDDh,csa3,DinG	NA|141aa|up_1|NC_007508.1_1793025_1793448_-,NA|329aa|down_0|NC_007508.1_1795208_1796195_-,NA|83aa|down_3|NC_007508.1_1797428_1797677_-	NA|968aa|up_9|NC_007508.1_1780948_1783852_-	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|310aa|up_8|NC_007508.1_1783957_1784887_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|496aa|up_7|NC_007508.1_1784883_1786371_-	pfam08007, Cupin_4, Cupin superfamily protein	NA|167aa|up_6|NC_007508.1_1786616_1787117_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|456aa|up_5|NC_007508.1_1787360_1788728_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|328aa|up_4|NC_007508.1_1788892_1789876_+	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|445aa|up_3|NC_007508.1_1789886_1791221_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|468aa|up_2|NC_007508.1_1791492_1792896_+	PRK00485, fumC, fumarate hydratase; Reviewed	NA|141aa|up_1|NC_007508.1_1793025_1793448_-	NA	NA|177aa|up_0|NC_007508.1_1793814_1794345_-	pfam11101, DUF2884, Protein of unknown function (DUF2884)	NA|329aa|down_0|NC_007508.1_1795208_1796195_-	NA	NA|292aa|down_1|NC_007508.1_1796191_1797067_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|121aa|down_2|NC_007508.1_1797063_1797426_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|83aa|down_3|NC_007508.1_1797428_1797677_-	NA	NA|186aa|down_4|NC_007508.1_1797809_1798367_+	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|324aa|down_5|NC_007508.1_1798452_1799424_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|450aa|down_6|NC_007508.1_1799449_1800799_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|79aa|down_7|NC_007508.1_1800791_1801028_+	PRK00846, PRK00846, hypothetical protein; Provisional	NA|251aa|down_8|NC_007508.1_1801028_1801781_+	COG3122, COG3122, Uncharacterized protein conserved in bacteria [Function unknown]	NA|282aa|down_9|NC_007508.1_1802111_1802957_+	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation
GCF_000009165.1_ASM916v1	NC_007508	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	3	2442762-2442832	2	CRISPRCasFinder	no		cas3,WYL,DEDDh,csa3,DinG	Orphan	CCGAACTCAAGGTTCATCTCTGC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,csa3,DinG	NA|150aa|up_1|NC_007508.1_2440923_2441373_+,NA|183aa|up_0|NC_007508.1_2441564_2442113_+,NA|66aa|down_0|NC_007508.1_2443194_2443392_+,NA|160aa|down_1|NC_007508.1_2443376_2443856_+,NA|180aa|down_4|NC_007508.1_2446544_2447084_+	NA|169aa|up_9|NC_007508.1_2431310_2431817_+	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|506aa|up_8|NC_007508.1_2431809_2433327_+	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|168aa|up_7|NC_007508.1_2433426_2433930_+	pfam05638, T6SS_HCP, Type VI secretion system effector, Hcp	NA|278aa|up_6|NC_007508.1_2433962_2434796_+	COG4455, ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only]	NA|168aa|up_5|NC_007508.1_2434783_2435287_+	COG3518, COG3518, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|626aa|up_4|NC_007508.1_2435289_2437167_+	pfam05947, T6SS_TssF, Type VI secretion system, TssF	NA|337aa|up_3|NC_007508.1_2437130_2438141_+	TIGR03347, VI_chp_1, type VI secretion protein, VC_A0111 family	NA|913aa|up_2|NC_007508.1_2438173_2440912_+	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family	NA|150aa|up_1|NC_007508.1_2440923_2441373_+	NA	NA|183aa|up_0|NC_007508.1_2441564_2442113_+	NA	NA|66aa|down_0|NC_007508.1_2443194_2443392_+	NA	NA|160aa|down_1|NC_007508.1_2443376_2443856_+	NA	NA|190aa|down_2|NC_007508.1_2443852_2444422_+	pfam13676, TIR_2, TIR domain	NA|646aa|down_3|NC_007508.1_2444598_2446536_+	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|180aa|down_4|NC_007508.1_2446544_2447084_+	NA	NA|462aa|down_5|NC_007508.1_2447080_2448466_+	TIGR03354, VI_FHA, type VI secretion system FHA domain protein	NA|446aa|down_6|NC_007508.1_2448462_2449800_+	TIGR03353, VI_chp_4, type VI secretion protein, VC_A0114 family	NA|439aa|down_7|NC_007508.1_2449801_2451118_+	PRK07033, PRK07033, DotU family type VI secretion system protein	NA|1153aa|down_8|NC_007508.1_2451121_2454580_+	TIGR03348, VI_IcmF, type VI secretion protein IcmF	NA|218aa|down_9|NC_007508.1_2454576_2455230_+	TIGR03373, VI_minor_4, type VI secretion-associated protein, BMA_A0400 family
GCF_000009165.1_ASM916v1	NC_007508	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	4	2872815-2872886	3	CRISPRCasFinder	no		cas3,WYL,DEDDh,csa3,DinG	Orphan	GCGGGCTGTTGCGAGGGACTCGC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,csa3,DinG	NA,NA|165aa|down_7|NC_007508.1_2880272_2880767_-	NA|579aa|up_9|NC_007508.1_2857540_2859277_-	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit	NA|541aa|up_8|NC_007508.1_2859428_2861051_+	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|384aa|up_7|NC_007508.1_2861067_2862219_+	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II	NA|37aa|up_6|NC_007508.1_2862307_2862418_+	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|638aa|up_5|NC_007508.1_2863884_2865798_-	COG2936, COG2936, Predicted acyl esterases [General function prediction only]	NA|804aa|up_4|NC_007508.1_2866122_2868534_+	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain	NA|415aa|up_3|NC_007508.1_2868634_2869879_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|385aa|up_2|NC_007508.1_2870039_2871194_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|87aa|up_1|NC_007508.1_2871207_2871468_-	pfam03795, YCII, YCII-related domain	NA|433aa|up_0|NC_007508.1_2871464_2872763_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|317aa|down_0|NC_007508.1_2872887_2873838_-	TIGR01850, N-acetyl-gamma-glutamyl-phosphate_reductase, N-acetyl-gamma-glutamyl-phosphate reductase, common form	NA|204aa|down_1|NC_007508.1_2873834_2874446_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|448aa|down_2|NC_007508.1_2874451_2875795_-	PRK04531, PRK04531, acetylglutamate kinase; Provisional	NA|367aa|down_3|NC_007508.1_2875839_2876940_-	PRK08737, PRK08737, acetylornithine deacetylase; Provisional	NA|151aa|down_4|NC_007508.1_2876945_2877398_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|413aa|down_5|NC_007508.1_2877638_2878877_-	PRK04527, PRK04527, argininosuccinate synthase; Provisional	NA|344aa|down_6|NC_007508.1_2878928_2879960_-	PRK04523, PRK04523, N-acetylornithine carbamoyltransferase; Reviewed	NA|165aa|down_7|NC_007508.1_2880272_2880767_-	NA	NA|475aa|down_8|NC_007508.1_2880944_2882369_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|146aa|down_9|NC_007508.1_2882634_2883072_+	pfam02657, SufE, Fe-S metabolism associated domain
GCF_000009165.1_ASM916v1	NC_007508	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	5	3632190-3632576	1	CRT	no		cas3,WYL,DEDDh,csa3,DinG	Orphan	CTTCTTGACNGCCTTCTTGGC	21	0	0	NA	NA	NA	7	7	Orphan	cas3,WYL,DEDDh,csa3,DinG	NA|278aa|up_7|NC_007508.1_3619341_3620175_+,NA|78aa|down_0|NC_007508.1_3633422_3633656_+	NA|249aa|up_9|NC_007508.1_3617476_3618223_-	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional	NA|297aa|up_8|NC_007508.1_3618297_3619188_+	cd00498, Hsp33, Heat shock protein 33 (Hsp33):  Cytosolic protein that acts as a molecular chaperone under oxidative conditions	NA|278aa|up_7|NC_007508.1_3619341_3620175_+	NA	NA|967aa|up_6|NC_007508.1_3620418_3623319_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|203aa|up_5|NC_007508.1_3623433_3624042_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|308aa|up_4|NC_007508.1_3624178_3625102_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|825aa|up_3|NC_007508.1_3625098_3627573_+	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|118aa|up_2|NC_007508.1_3627875_3628229_-	pfam06993, DUF1304, Protein of unknown function (DUF1304)	NA|454aa|up_1|NC_007508.1_3628408_3629770_-	COG3202, COG3202, ATP/ADP translocase [Energy production and conversion]	NA|448aa|up_0|NC_007508.1_3630139_3631483_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|78aa|down_0|NC_007508.1_3633422_3633656_+	NA	NA|132aa|down_1|NC_007508.1_3633649_3634045_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|370aa|down_2|NC_007508.1_3634193_3635303_-	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|145aa|down_3|NC_007508.1_3635473_3635908_-	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|112aa|down_4|NC_007508.1_3636356_3636692_-	PRK02237, PRK02237, YnfA family protein	NA|335aa|down_5|NC_007508.1_3636688_3637693_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|267aa|down_6|NC_007508.1_3637883_3638684_-	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family	NA|183aa|down_7|NC_007508.1_3638680_3639229_-	PRK11762, nudE, adenosine nucleotide hydrolase NudE; Provisional	NA|473aa|down_8|NC_007508.1_3639270_3640689_+	PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional	NA|245aa|down_9|NC_007508.1_3640679_3641414_+	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional
