The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_007929	Lactobacillus salivarius UCC118, complete sequence	1827111	53642	69918	1827111	protease,transposase	Bacillus_phage(28.57%)	13	NA	NA
WP_011475480.1|53642_54395_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_011475481.1|54733_56122_-	MFS transporter	NA	NA	NA	NA	NA
WP_011475482.1|56326_56845_+|transposase	transposase	transposase	A0A1B1P776	Bacillus_phage	35.0	5.1e-14
WP_143453937.1|56877_57498_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.5	3.7e-19
WP_164920218.1|57565_57709_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_011475483.1|57832_58300_-|transposase	IS200/IS605 family transposase	transposase	W0UUZ0	Sulfolobus_monocaudavirus	38.8	2.0e-17
WP_011475486.1|62093_63575_-	ABC-F type ribosomal protection protein	NA	A0A2I4R674	Erysipelothrix_phage	27.4	2.6e-34
WP_011475487.1|63880_64300_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011475488.1|64385_64970_+	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	44.1	7.7e-27
WP_011475489.1|65120_65840_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	A0A2I7RZT1	Vibrio_phage	26.2	4.6e-05
WP_003701493.1|65892_67251_-	glutamate--cysteine ligase	NA	NA	NA	NA	NA
WP_003703180.1|67453_67684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475490.1|67809_69918_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	38.9	1.8e-121
>prophage 2
NC_007929	Lactobacillus salivarius UCC118, complete sequence	1827111	279985	341988	1827111	plate,integrase,portal,tRNA,capsid,head,tail,transposase,terminase,protease	Lactobacillus_phage(43.75%)	83	289775:289800	330039:330064
WP_011475599.1|279985_282013_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	38.1	1.5e-98
WP_011475600.1|282146_282917_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_011475601.1|282927_283485_+	ribonuclease M5	NA	NA	NA	NA	NA
WP_011475602.1|283496_284387_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_003702215.1|284474_284708_+	Veg family protein	NA	NA	NA	NA	NA
WP_011475603.1|284803_285652_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011475604.1|285664_286783_+	aminotransferase	NA	NA	NA	NA	NA
WP_011475605.1|286826_287297_+	arginine repressor	NA	NA	NA	NA	NA
WP_011475606.1|287335_288205_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_011475607.1|288420_289728_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	33.6	5.2e-39
WP_081515082.1|289711_289906_+	hypothetical protein	NA	NA	NA	NA	NA
289775:289800	attL	AAAGATTATAAATTAAGTTGTTTTTT	NA	NA	NA	NA
WP_011475608.1|289940_291086_-|integrase	site-specific integrase	integrase	A0A2P0ZL94	Lactobacillus_phage	34.1	3.6e-44
WP_011475610.1|291509_291944_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011475611.1|291940_292384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011475612.1|292376_293300_-	ParA family protein	NA	A0A1X9IGI7	Lactococcus_phage	32.5	2.0e-29
WP_011475613.1|293384_293603_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011475614.1|293708_294485_-	helix-turn-helix domain-containing protein	NA	A0A1S5S7K7	Streptococcus_phage	41.5	6.8e-39
WP_011475616.1|295015_295222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475617.1|295259_295475_+	hypothetical protein	NA	A0A182BQC3	Lactococcus_phage	66.7	1.0e-16
WP_011475618.1|295476_296082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011475619.1|296305_296497_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	49.2	1.2e-08
WP_011475620.1|296499_296640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475621.1|296632_296806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160944222.1|296869_297070_+	helix-turn-helix domain-containing protein	NA	Q9G0C3	Lactococcus_phage	57.1	2.9e-10
WP_011475622.1|297108_297837_+	phage antirepressor KilAC domain-containing protein	NA	Q38585	Streptococcus_virus	64.7	8.0e-82
WP_003703571.1|298347_298527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475624.1|298519_298657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164920222.1|298661_298880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475626.1|298872_299589_+	hypothetical protein	NA	D7RWH3	Brochothrix_phage	41.6	2.0e-29
WP_011475627.1|299581_300565_+	phage replisome organizer N-terminal domain-containing protein	NA	A0A1S5SAV1	Streptococcus_phage	46.0	2.0e-27
WP_011475628.1|300561_300765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475629.1|300768_301035_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003703564.1|301015_301432_+	replication terminator protein	NA	A0A097BY30	Enterococcus_phage	46.8	5.1e-25
WP_011475630.1|301436_302165_+	hypothetical protein	NA	A0A097BY87	Enterococcus_phage	56.8	1.4e-70
WP_003703548.1|302205_302382_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475632.1|302383_302581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475633.1|302586_302916_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475634.1|302916_303093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475635.1|303159_303522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164920245.1|303514_303745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041822658.1|303737_303986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003703585.1|304470_304713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475638.1|304727_305168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475639.1|305178_305460_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475640.1|305477_305660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475641.1|305734_306175_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_011475642.1|306271_306517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049770557.1|306524_306944_+	DUF2335 domain-containing protein	NA	S5WJ01	Leptospira_phage	33.3	3.5e-05
WP_160988124.1|307242_307863_+	DNA-packaging protein	NA	NA	NA	NA	NA
WP_011475645.1|307903_308056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475646.1|308057_308588_+	HNH endonuclease	NA	E9LUP7	Lactobacillus_phage	54.2	1.1e-43
WP_011475647.1|308766_309240_+|terminase	phage terminase small subunit P27 family	terminase	A0A286QP74	Streptococcus_phage	56.1	3.1e-42
WP_011475648.1|309239_311123_+|terminase	terminase large subunit	terminase	E9LUP9	Lactobacillus_phage	68.8	1.2e-262
WP_011475649.1|311112_311307_+	DUF1056 family protein	NA	NA	NA	NA	NA
WP_011475650.1|311306_312482_+|portal	phage portal protein	portal	E9LUQ1	Lactobacillus_phage	56.1	7.0e-128
WP_011475651.1|312462_313182_+|protease	Clp protease ClpP	protease	E9LUQ2	Lactobacillus_phage	61.8	2.7e-74
WP_011475652.1|313171_314368_+|capsid	phage major capsid protein	capsid	E9LUQ3	Lactobacillus_phage	65.9	1.1e-149
WP_011475653.1|314379_314703_+|head,tail	phage gp6-like head-tail connector protein	head,tail	F8HGT2	Streptococcus_phage	47.9	2.3e-17
WP_011475654.1|314695_315052_+|head	phage head closure protein	head	A0A2P0ZLF0	Lactobacillus_phage	35.8	3.5e-14
WP_011475655.1|315044_315437_+	HK97 gp10 family phage protein	NA	Q6J1X9	Lactobacillus_phage	44.5	2.0e-15
WP_011475656.1|315436_315814_+	DUF806 family protein	NA	A0A0M7RE53	Lactobacillus_phage	38.2	1.8e-13
WP_011475657.1|315815_316520_+|tail	phage tail protein	tail	A0A0M7RF39	Lactobacillus_phage	43.8	9.5e-48
WP_011475658.1|316569_316968_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160996982.1|317036_317177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475660.1|317224_317638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475661.1|317692_321418_+	tape measure protein	NA	A0A0M9JJ59	Lactobacillus_phage	37.8	1.3e-119
WP_011475662.1|321430_322258_+|tail	phage tail family protein	tail	E9LUJ3	Lactobacillus_phage	43.3	3.5e-57
WP_011475663.1|322273_324586_+|tail	phage tail protein	tail	E9LUJ4	Lactobacillus_phage	46.3	1.3e-64
WP_011475664.1|324578_324917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475665.1|325025_326372_+|plate	BppU family phage baseplate upper protein	plate	NA	NA	NA	NA
WP_011475666.1|326552_326975_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475667.1|326988_327396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475668.1|327398_327581_+	XkdX family protein	NA	NA	NA	NA	NA
WP_011475669.1|327633_327939_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_011475670.1|327935_328262_+	hypothetical protein	NA	A0A2H4PBB2	Lactobacillus_phage	48.1	1.7e-07
WP_011475671.1|328273_329542_+	LysM peptidoglycan-binding domain-containing protein	NA	Q6EVN0	Oenoccocus_phage	55.4	2.2e-119
WP_011475672.1|330043_331426_-	argininosuccinate lyase	NA	NA	NA	NA	NA
330039:330064	attR	AAAGATTATAAATTAAGTTGTTTTTT	NA	NA	NA	NA
WP_011475673.1|331449_332661_-	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_011475674.1|333222_334398_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_011475675.1|334413_335403_+	D-2-hydroxyacid dehydrogenase	NA	Q89388	Paramecium_bursaria_Chlorella_virus	36.5	3.1e-44
WP_011475676.1|335421_336471_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_164920223.1|336934_340576_+	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_011475678.1|340698_341988_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	30.0	2.1e-45
>prophage 3
NC_007929	Lactobacillus salivarius UCC118, complete sequence	1827111	385488	394069	1827111		Moraxella_phage(16.67%)	9	NA	NA
WP_003704255.1|385488_386802_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	33.7	2.5e-49
WP_011475710.1|386948_387719_+	TIGR02452 family protein	NA	G3MBH6	Bacillus_virus	31.2	3.4e-22
WP_011475711.1|387856_389227_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_003705725.1|389362_390841_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.8	1.4e-64
WP_003704211.1|390970_391378_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_011475712.1|391396_392512_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	32.4	1.9e-34
WP_003699582.1|392558_392807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003699581.1|392822_393191_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A2P0ZKX3	Lactobacillus_phage	35.1	9.8e-12
WP_011475713.1|393232_394069_-	DUF72 domain-containing protein	NA	A0A1V0CNL1	Kaumoebavirus	29.9	2.9e-11
>prophage 4
NC_007929	Lactobacillus salivarius UCC118, complete sequence	1827111	707997	716770	1827111		Synechococcus_phage(33.33%)	9	NA	NA
WP_011475856.1|707997_708480_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	41.1	1.6e-22
WP_003700035.1|708476_709511_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_003700037.1|709823_710537_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	37.4	3.1e-38
WP_003700038.1|710555_710804_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_011475857.1|710803_711478_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_011475858.1|711479_713705_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.9e-142
WP_011475859.1|713680_715132_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.6	1.2e-63
WP_003700044.1|715132_716170_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	42.3	2.0e-62
WP_003700046.1|716182_716770_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	36.9	1.1e-25
>prophage 5
NC_007929	Lactobacillus salivarius UCC118, complete sequence	1827111	750704	758212	1827111	tRNA	Staphylococcus_phage(33.33%)	7	NA	NA
WP_011475875.1|750704_751601_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	37.3	3.9e-54
WP_011475876.1|751776_752565_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_011475877.1|752561_753776_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	34.8	1.5e-48
WP_011475878.1|753772_755680_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.3	4.7e-57
WP_003700096.1|755697_756654_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	61.5	2.0e-117
WP_011475879.1|756671_757175_+	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	43.7	3.8e-30
WP_011475880.1|757351_758212_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.4	1.4e-56
>prophage 6
NC_007929	Lactobacillus salivarius UCC118, complete sequence	1827111	767138	865450	1827111	plate,holin,integrase,portal,tRNA,capsid,transposase,head,tail,terminase,protease	Lactobacillus_phage(23.08%)	114	779832:779852	804277:804297
WP_011475886.1|767138_768449_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_011475887.1|768570_769974_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA	NA
WP_011475888.1|770016_770634_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011475889.1|770801_771686_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.5	6.0e-23
WP_011475890.1|771705_773310_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011475891.1|773468_774125_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_011475892.1|774140_774809_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011475893.1|774801_777276_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	27.6	3.6e-57
WP_011475894.1|777764_778886_-|integrase	site-specific integrase	integrase	A0A0M9JJ77	Lactobacillus_phage	55.1	2.6e-108
WP_003704439.1|778904_779087_-	hypothetical protein	NA	A0A286QNA2	Streptococcus_phage	67.3	2.0e-10
WP_011475895.1|779230_779368_-	hypothetical protein	NA	NA	NA	NA	NA
779832:779852	attL	AATCTGTTACAATCTGTTACA	NA	NA	NA	NA
WP_011475896.1|780315_780747_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	47.2	4.6e-29
WP_011475897.1|780846_782124_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	35.4	4.3e-54
WP_161017729.1|782505_782880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475899.1|782876_783053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011475900.1|783065_783458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011475901.1|783538_783682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164920217.1|783815_784115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011475903.1|784133_784286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011475904.1|784306_784957_-	Ltp family lipoprotein	NA	A0A0A1ERB0	Lactobacillus_phage	59.3	6.0e-12
WP_080517777.1|784989_785352_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2P1JU12	Anoxybacillus_phage	35.6	2.4e-10
WP_011475906.1|785425_785821_-	helix-turn-helix transcriptional regulator	NA	A0A0M4QX29	Bacillus_phage	40.8	7.5e-18
WP_041823025.1|786161_786353_+	antirepressor	NA	A0A0M7RDS9	Lactobacillus_phage	47.6	1.2e-08
WP_003702171.1|787034_787229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475911.1|787203_787515_+	DUF771 domain-containing protein	NA	Q37943	Lactococcus_phage	40.4	9.8e-13
WP_011475912.1|787621_787795_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475914.1|788012_788600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475915.1|788673_789897_+	DEAD/DEAH box helicase	NA	A0A2H4J064	uncultured_Caudovirales_phage	53.2	3.7e-116
WP_011475916.1|789868_790102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475917.1|790098_790413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003703702.1|790412_790826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014568365.1|790747_792457_+	AAA family ATPase	NA	A0A2H4J7Q2	uncultured_Caudovirales_phage	48.5	9.2e-129
WP_003703687.1|792477_792945_+	DUF669 domain-containing protein	NA	A0A2H4J1S8	uncultured_Caudovirales_phage	46.8	5.7e-33
WP_011475919.1|793125_794823_+	hypothetical protein	NA	A0A1B1P7M5	Bacillus_phage	54.7	9.0e-177
WP_011475920.1|794823_795855_+	primase	NA	A0A1B1P7L5	Bacillus_phage	40.9	5.5e-68
WP_011475921.1|795858_796728_+	DNA primase	NA	A0A2H4J1M0	uncultured_Caudovirales_phage	49.8	2.8e-73
WP_011475922.1|796743_796968_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475924.1|797362_797617_+	hypothetical protein	NA	A0A0E3TAK6	Staphylococcus_phage	42.5	1.2e-05
WP_011475925.1|797585_798197_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_011475926.1|798198_799146_+|integrase	site-specific integrase	integrase	A8ATM2	Listeria_phage	39.7	2.0e-56
WP_011475927.1|799142_799535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475928.1|799557_800211_+	SAM-dependent DNA methyltransferase	NA	B7T0H3	Staphylococcus_virus	46.7	9.8e-47
WP_011475929.1|800203_800512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475930.1|800528_800840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475932.1|801238_801547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475933.1|801536_801773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475935.1|801953_802172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475937.1|802778_803021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475938.1|803085_803373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475939.1|803385_803703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475940.1|804339_804759_+	hypothetical protein	NA	NA	NA	NA	NA
804277:804297	attR	AATCTGTTACAATCTGTTACA	NA	NA	NA	NA
WP_041823029.1|805038_805248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475942.1|805249_805576_+	HNH endonuclease	NA	U5U498	Staphylococcus_phage	55.2	4.0e-17
WP_011475943.1|805700_806153_+|terminase	phage terminase small subunit P27 family	terminase	A6M947	Geobacillus_virus	38.3	2.1e-19
WP_180376076.1|806136_807909_+|terminase	terminase large subunit	terminase	F8J1B1	Lactobacillus_phage	59.1	5.0e-202
WP_011475945.1|807921_809166_+|portal	phage portal protein	portal	A0A0K2CZB0	Paenibacillus_phage	46.1	3.2e-99
WP_014568367.1|809146_809851_+|protease	Clp protease ClpP	protease	A0A0K2CZ28	Paenibacillus_phage	57.6	4.0e-70
WP_011475947.1|809847_810978_+|capsid	phage major capsid protein	capsid	A0A0K2CZ99	Paenibacillus_phage	46.4	3.5e-84
WP_080517800.1|810974_811157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475948.1|811169_811490_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_011475949.1|811479_811824_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_011475950.1|811835_812258_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_011475951.1|812254_812626_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_011475952.1|812637_813288_+|tail	tail protein	tail	A0A060AKE9	Staphylococcus_phage	34.0	2.4e-13
WP_011475953.1|813284_813674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475955.1|813862_817687_+|tail	phage tail tape measure protein	tail	A0A2K9VCB0	Lactobacillus_phage	47.1	1.8e-84
WP_011475956.1|817698_818514_+|tail	phage tail family protein	tail	E9LUJ3	Lactobacillus_phage	35.8	4.8e-35
WP_011475957.1|818513_820364_+|tail	phage tail protein	tail	E9LUJ4	Lactobacillus_phage	33.2	8.0e-102
WP_011475958.1|820367_821126_+|holin	holin	holin	Q5ULM6	Lactobacillus_virus	28.6	2.1e-16
WP_003702550.1|821277_821556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475959.1|821555_822632_+|plate	BppU family phage baseplate upper protein	plate	O03968	Lactobacillus_phage	44.5	2.0e-49
WP_011475960.1|822712_823108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475961.1|823122_823524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475668.1|823525_823708_+	XkdX family protein	NA	NA	NA	NA	NA
WP_011475962.1|823760_824066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003704600.1|824062_824389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475963.1|824400_825669_+	LysM peptidoglycan-binding domain-containing protein	NA	Q6EVN0	Oenoccocus_phage	57.2	1.2e-125
WP_034984149.1|826169_826352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475968.1|826971_827733_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_003700135.1|827841_828366_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_003704358.1|828490_828838_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003700137.1|829183_830230_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	37.4	3.1e-26
WP_011475969.1|830236_832654_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_011475970.1|832806_833946_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_003700143.1|833968_834610_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.6	1.3e-35
WP_011475971.1|834626_835097_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_011475972.1|835604_836567_-	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_164920231.1|836821_837334_+	DUF3013 family protein	NA	NA	NA	NA	NA
WP_014568374.1|837350_838241_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_011475974.1|838240_838972_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_003710060.1|839011_841231_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	U5J9N6	Bacillus_phage	40.6	7.5e-14
WP_011475975.1|841245_841692_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_011475976.1|841696_842311_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011475977.1|842377_842824_+	signal peptidase II	NA	NA	NA	NA	NA
WP_011475978.1|842816_843713_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	29.6	3.7e-12
WP_003704375.1|843920_844457_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_003700158.1|844483_845791_+	uracil transporter	NA	Q9KX94	Enterobacteria_phage	37.0	3.6e-64
WP_003704386.1|845852_846953_+	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA	NA
WP_081515090.1|846930_848862_+	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_003704381.1|848858_849572_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_011475979.1|849571_850192_+	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	34.6	2.4e-34
WP_011475980.1|850306_851263_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011475981.1|851288_852209_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_011475982.1|852395_853148_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_011475983.1|853207_854371_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_011475984.1|854440_855211_+	glutamate racemase	NA	NA	NA	NA	NA
WP_011475985.1|855419_856106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475986.1|856225_856570_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_011475987.1|857051_858182_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_003707834.1|858178_858565_-	ribonuclease HI family protein	NA	NA	NA	NA	NA
WP_011475988.1|858591_858966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475989.1|859085_860744_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_069469303.1|860933_861389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011475993.1|864751_865450_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
>prophage 7
NC_007929	Lactobacillus salivarius UCC118, complete sequence	1827111	1257560	1266581	1827111		Streptococcus_phage(33.33%)	10	NA	NA
WP_003700662.1|1257560_1258553_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	30.9	2.6e-35
WP_003700663.1|1258587_1259214_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	51.0	6.9e-50
WP_011476227.1|1259333_1259573_-	YaaL family protein	NA	NA	NA	NA	NA
WP_003700665.1|1259586_1260186_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_003700666.1|1260212_1260527_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_011476228.1|1260544_1262284_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.9	6.6e-58
WP_044005603.1|1262490_1262958_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_003700670.1|1263818_1264049_+	glutaredoxin-like protein NrdH	NA	X2KRY7	Enterococcus_phage	40.3	2.7e-12
WP_003700671.1|1264045_1264429_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	R4JF54	Bacillus_phage	38.7	5.8e-15
WP_011476229.1|1264409_1266581_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.7	1.0e-265
>prophage 8
NC_007929	Lactobacillus salivarius UCC118, complete sequence	1827111	1529114	1534682	1827111	transposase	Staphylococcus_phage(42.86%)	8	NA	NA
WP_011476358.1|1529114_1529873_-	3-oxoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.2	4.1e-12
WP_003701248.1|1529872_1530100_-	DUF2829 domain-containing protein	NA	G3MBC9	Bacillus_virus	37.0	2.2e-06
WP_011476359.1|1530113_1530611_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	36.7	1.3e-14
WP_011475678.1|1531200_1532490_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	30.0	2.1e-45
WP_011476360.1|1532626_1533499_-	DegV family protein	NA	NA	NA	NA	NA
WP_011476361.1|1533570_1533915_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	37.1	5.6e-09
WP_011476362.1|1533911_1534301_-	CrcB family protein	NA	A0A2H4PQR0	Staphylococcus_phage	34.2	1.5e-05
WP_011476363.1|1534358_1534682_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	38.4	9.5e-19
>prophage 1
NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	242436	5305	72746	242436	integrase,transposase	Streptococcus_phage(26.32%)	50	NA	NA
WP_003706882.1|5305_6118_+	AAA family ATPase	NA	F0PIG8	Enterococcus_phage	61.0	8.6e-85
WP_011476548.1|6117_6453_+	DUF5388 domain-containing protein	NA	F0PIG7	Enterococcus_phage	34.2	5.1e-07
WP_011476549.1|6912_8130_+|transposase	transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	55.8	1.3e-121
WP_011476551.1|8750_11285_-	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	26.4	7.4e-66
WP_155105527.1|11563_11707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165440178.1|12145_13000_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.9	1.7e-51
WP_011476553.1|13204_13828_-	MarC family protein	NA	NA	NA	NA	NA
WP_003699301.1|14189_15311_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.4	1.9e-13
WP_011476554.1|15416_16067_-	membrane protein	NA	NA	NA	NA	NA
WP_011476555.1|16069_17089_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003699296.1|17356_18616_+	MFS transporter	NA	NA	NA	NA	NA
WP_011476556.1|18636_20094_+	rhamnulokinase	NA	NA	NA	NA	NA
WP_003699292.1|20098_20425_+	L-rhamnose mutarotase	NA	NA	NA	NA	NA
WP_011476557.1|20437_21703_+	L-rhamnose isomerase	NA	NA	NA	NA	NA
WP_011476558.1|21792_22608_+	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA	NA
WP_011476559.1|22913_24629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011476561.1|26116_27043_-|integrase	site-specific integrase	integrase	A8ATM2	Listeria_phage	44.7	1.9e-75
WP_011476562.1|27260_27818_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_011476563.1|27819_29217_+	N-6 DNA methylase	NA	A0A1X9I6H1	Streptococcus_phage	28.1	1.7e-27
WP_011476564.1|29229_29481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014573573.1|33595_34147_+	DNA methyltransferase	NA	NA	NA	NA	NA
WP_014573574.1|34212_35652_+	site-specific DNA-methyltransferase	NA	A0A220NUF4	Escherichia_phage	39.5	8.8e-56
WP_011476565.1|35657_38285_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_011476566.1|38417_41603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476567.1|41702_42041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476568.1|42080_44138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476569.1|44134_44698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476570.1|44773_47551_+	AAA family ATPase	NA	G3MAX6	Bacillus_virus	36.5	1.2e-40
WP_011476571.1|47581_48832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476573.1|49366_50761_-	amino acid permease	NA	NA	NA	NA	NA
WP_011476574.1|50800_51904_-	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_011476575.1|52432_53200_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA	NA
WP_011476576.1|53286_53796_-	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_011476577.1|53944_54787_+	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	36.3	1.0e-43
WP_011476578.1|54960_55395_+	N-acetyltransferase	NA	A0A1X9I6I8	Streptococcus_phage	47.8	2.0e-32
WP_011476579.1|55467_56421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476580.1|56487_56763_-	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	62.9	5.4e-23
WP_011476581.1|62002_62206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476582.1|62266_62521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476583.1|62534_62702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011476584.1|62873_63569_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003703269.1|63726_64158_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	46.5	2.3e-28
WP_011476585.1|64257_65535_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	35.9	8.6e-55
WP_003703276.1|65874_66447_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	42.6	6.6e-23
WP_011476586.1|66591_67296_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_003703256.1|67499_67907_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0C5AEA5	Paenibacillus_phage	50.0	1.8e-30
WP_003703288.1|68866_69100_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_011476588.1|69418_71323_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.8	1.1e-98
WP_011476589.1|71562_71844_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_143455698.1|71870_72746_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	37.2	9.4e-37
>prophage 1
NC_006530	Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence	44013	0	1725	44013		Streptomyces_phage(100.0%)	1	NA	NA
WP_011241747.1|1020_1725_-	NUDIX hydrolase	NA	A0A0E3JJF3	Streptomyces_phage	30.5	7.7e-05
>prophage 2
NC_006530	Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence	44013	7287	8073	44013		Clostridioides_phage(100.0%)	1	NA	NA
WP_005717330.1|7287_8073_+	ParA family protein	NA	A0A1V0DZZ0	Clostridioides_phage	34.0	4.7e-19
>prophage 3
NC_006530	Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence	44013	18131	18998	44013		Pithovirus(100.0%)	1	NA	NA
WP_011241762.1|18131_18998_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	31.9	1.1e-16
>prophage 4
NC_006530	Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence	44013	23922	25272	44013		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_011241768.1|23922_25272_+	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	49.9	7.8e-123
>prophage 5
NC_006530	Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence	44013	30602	37947	44013		Brazilian_cedratvirus(33.33%)	5	NA	NA
WP_011241772.1|30602_31418_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	26.8	5.4e-10
WP_164920214.1|32757_34281_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_011241775.1|34280_35252_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.5	2.5e-22
WP_011241776.1|35347_36679_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011241777.1|37362_37947_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	34.5	2.0e-19
>prophage 6
NC_006530	Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence	44013	41275	41566	44013		Streptococcus_phage(100.0%)	1	NA	NA
WP_011241782.1|41275_41566_-	DUF4176 domain-containing protein	NA	A0A1X9I6T6	Streptococcus_phage	50.0	6.8e-08
