assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000008545.1_ASM854v1	NC_000853	Thermotoga maritima MSB8, complete sequence	1	412-3105	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	Orphan	GTTTCAATACTTCCTTAGAGGTATGGAAAC,GTTTCAATAATTCCTTAGAGGTATGGAAAC,GTTTCAATANTTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	39,40,40	40	Orphan	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	NA,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|651aa|down_0|NC_000853.1_3154_5107_-	TIGR00376, DNA-binding_protein_SMUBP-2, DNA helicase, putative	NA|346aa|down_1|NC_000853.1_5103_6141_-	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides	NA|439aa|down_2|NC_000853.1_6144_7461_-	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|225aa|down_3|NC_000853.1_7494_8169_+	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|143aa|down_4|NC_000853.1_8204_8633_-	COG1633, COG1633, Uncharacterized conserved protein [Function unknown]	NA|608aa|down_5|NC_000853.1_8629_10453_-	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]	NA|127aa|down_6|NC_000853.1_10471_10852_-	COG3411, COG3411, Ferredoxin [Energy production and conversion]	NA|163aa|down_7|NC_000853.1_10854_11343_-	COG1905, NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion]	NA|254aa|down_8|NC_000853.1_11546_12308_+	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion]	NA|279aa|down_9|NC_000853.1_12317_13154_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)
GCF_000008545.1_ASM854v1	NC_000853	Thermotoga maritima MSB8, complete sequence	2	369170-369731	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	Orphan	GTTTCAATAATTCCTTAGAGGTATGGAAAC,GTTTCAATAATTCCTTAGAGGTATGGAAAC,GTTTCAATAATTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	7,8,8	8	Orphan	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	NA|59aa|up_9|NC_000853.1_359485_359662_+,NA|69aa|down_6|NC_000853.1_376400_376607_+	NA|59aa|up_9|NC_000853.1_359485_359662_+	NA	NA|414aa|up_8|NC_000853.1_359674_360916_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|339aa|up_7|NC_000853.1_361172_362189_+	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed	NA|254aa|up_6|NC_000853.1_362185_362947_+	COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism]	NA|422aa|up_5|NC_000853.1_362943_364209_+	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|254aa|up_4|NC_000853.1_364205_364967_+	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]	NA|377aa|up_3|NC_000853.1_364963_366094_+	TIGR00033, Chorismate_synthase, chorismate synthase	NA|493aa|up_2|NC_000853.1_366041_367520_+	PRK13951, PRK13951, bifunctional shikimate kinase AroK/3-dehydroquinate synthase AroB	NA|145aa|up_1|NC_000853.1_367516_367951_+	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|201aa|up_0|NC_000853.1_367943_368546_-	pfam01810, LysE, LysE type translocator	NA|405aa|down_0|NC_000853.1_369841_371056_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|235aa|down_1|NC_000853.1_371042_371747_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|336aa|down_2|NC_000853.1_371743_372751_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|421aa|down_3|NC_000853.1_372747_374010_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|329aa|down_4|NC_000853.1_374025_375012_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|402aa|down_5|NC_000853.1_375179_376385_+	PRK08198, PRK08198, threonine dehydratase; Provisional	NA|69aa|down_6|NC_000853.1_376400_376607_+	NA	NA|305aa|down_7|NC_000853.1_376603_377518_+	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|357aa|down_8|NC_000853.1_377531_378602_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|117aa|down_9|NC_000853.1_378789_379140_+	cd11528, NTP-PPase_MazG_Nterm, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3
GCF_000008545.1_ASM854v1	NC_000853	Thermotoga maritima MSB8, complete sequence	3	396568-397133	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no		cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	Orphan	GTTTCAATAATTCCTTAGAGGTATGGAAAC,GTTTCAATAATTCCTTAGAGGTATGGAAAC,GTTTCAATANTTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	7,8,8	8	Orphan	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	NA,NA	NA|226aa|up_9|NC_000853.1_385327_386005_+	COG2013, COG2013, Uncharacterized conserved protein [Function unknown]	NA|370aa|up_8|NC_000853.1_386124_387234_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|148aa|up_7|NC_000853.1_387243_387687_-	COG1318, COG1318, Predicted transcriptional regulators [Transcription]	NA|248aa|up_6|NC_000853.1_387683_388427_-	PRK04328, PRK04328, hypothetical protein; Provisional	NA|153aa|up_5|NC_000853.1_388583_389042_+	TIGR01529, Arginine_repressor	NA|1001aa|up_4|NC_000853.1_389031_392034_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|597aa|up_3|NC_000853.1_392267_394058_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|148aa|up_2|NC_000853.1_394074_394518_+	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|211aa|up_1|NC_000853.1_394548_395181_-	PRK15070, PRK15070, phosphate propanoyltransferase	NA|242aa|up_0|NC_000853.1_395215_395941_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|444aa|down_0|NC_000853.1_398314_399646_+	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|450aa|down_1|NC_000853.1_400050_401400_+	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|221aa|down_2|NC_000853.1_401376_402039_-	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|167aa|down_3|NC_000853.1_402067_402568_+	cd02150, nitroreductase, nitroreductase family protein	NA|184aa|down_4|NC_000853.1_402693_403245_+	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|652aa|down_5|NC_000853.1_403210_405166_+	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|322aa|down_6|NC_000853.1_405247_406213_+	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD	NA|337aa|down_7|NC_000853.1_406209_407220_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|362aa|down_8|NC_000853.1_407212_408298_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|302aa|down_9|NC_000853.1_408294_409200_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
GCF_000008545.1_ASM854v1	NC_000853	Thermotoga maritima MSB8, complete sequence	4	409295-410923	4,4,4	CRISPRCasFinder,CRT,PILER-CR	no		cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	Orphan	GTTTCCATACCTCTAAGGAATTATTGAAAC,GTTTCCATACCTCTAAGGAATTATTGAAAC,GTTTCAATAATTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	24,24,23	24	Orphan	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	NA,NA	NA|444aa|up_9|NC_000853.1_398314_399646_+	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|450aa|up_8|NC_000853.1_400050_401400_+	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|221aa|up_7|NC_000853.1_401376_402039_-	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|167aa|up_6|NC_000853.1_402067_402568_+	cd02150, nitroreductase, nitroreductase family protein	NA|184aa|up_5|NC_000853.1_402693_403245_+	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|652aa|up_4|NC_000853.1_403210_405166_+	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|322aa|up_3|NC_000853.1_405247_406213_+	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD	NA|337aa|up_2|NC_000853.1_406209_407220_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|362aa|up_1|NC_000853.1_407212_408298_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|302aa|up_0|NC_000853.1_408294_409200_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|407aa|down_0|NC_000853.1_411579_412800_+	cd03792, GT4_trehalose_phosphorylase, trehalose phosphorylase and similar proteins	NA|372aa|down_1|NC_000853.1_412804_413920_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|246aa|down_2|NC_000853.1_413946_414684_-	cd00981, arch_gltB, Archaeal-type gltB domain	NA|426aa|down_3|NC_000853.1_414671_415949_-	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion]	NA|152aa|down_4|NC_000853.1_415945_416401_-	cd10563, CooF_like, CooF, iron-sulfur subunit of carbon monoxide dehydrogenase	NA|508aa|down_5|NC_000853.1_416397_417921_-	COG0069, GltB, Glutamate synthase domain 2 [Amino acid transport and metabolism]	NA|378aa|down_6|NC_000853.1_417913_419047_-	cd01907, GlxB, Glutamine amidotransferases class-II (Gn-AT)_GlxB-type	NA|226aa|down_7|NC_000853.1_419447_420125_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|406aa|down_8|NC_000853.1_420105_421323_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|185aa|down_9|NC_000853.1_421306_421861_-	COG1435, Tdk, Thymidine kinase [Nucleotide transport and metabolism]
GCF_000008545.1_ASM854v1	NC_000853	Thermotoga maritima MSB8, complete sequence	5	1428083-1428244	5	CRISPRCasFinder	no		cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	Orphan	GTTTCCATACCTCTAAGGAATTATTGAAACC	31	0	0	NA	NA	III-A	2	2	Orphan	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	NA|51aa|up_9|NC_000853.1_1417361_1417514_-,NA|247aa|up_5|NC_000853.1_1420835_1421576_-,NA	NA|51aa|up_9|NC_000853.1_1417361_1417514_-	NA	NA|328aa|up_8|NC_000853.1_1417649_1418633_+	cd03265, ABC_DrrA, Daunorubicin/doxorubicin resistance ATP-binding protein	NA|257aa|up_7|NC_000853.1_1418637_1419408_+	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|469aa|up_6|NC_000853.1_1419496_1420903_+	cd03813, GT4-like, glycosyltransferase family 4 proteins	NA|247aa|up_5|NC_000853.1_1420835_1421576_-	NA	NA|399aa|up_4|NC_000853.1_1421637_1422834_-	pfam01590, GAF, GAF domain	NA|459aa|up_3|NC_000853.1_1422830_1424207_-	COG4267, COG4267, Predicted membrane protein [Function unknown]	NA|717aa|up_2|NC_000853.1_1424196_1426347_-	pfam09960, DUF2194, Uncharacterized protein conserved in bacteria (DUF2194)	NA|324aa|up_1|NC_000853.1_1426347_1427319_+	TIGR01370, Uncharacterized_protein_DR_0705, extracellular protein	NA|246aa|up_0|NC_000853.1_1427296_1428034_+	TIGR00376, DNA-binding_protein_SMUBP-2, DNA helicase, putative	NA|433aa|down_0|NC_000853.1_1428813_1430112_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|319aa|down_1|NC_000853.1_1431041_1431998_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|244aa|down_2|NC_000853.1_1431994_1432726_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|206aa|down_3|NC_000853.1_1432758_1433376_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|242aa|down_4|NC_000853.1_1433369_1434095_-	COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]	NA|383aa|down_5|NC_000853.1_1434135_1435284_-	COG1260, INO1, Myo-inositol-1-phosphate synthase [Lipid metabolism]	NA|76aa|down_6|NC_000853.1_1435545_1435773_+	COG1905, NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion]	NA|380aa|down_7|NC_000853.1_1437316_1438456_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|162aa|down_8|NC_000853.1_1438468_1438954_+	pfam01257, 2Fe-2S_thioredx, Thioredoxin-like [2Fe-2S] ferredoxin	NA|627aa|down_9|NC_000853.1_1438946_1440827_+	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]
GCF_000008545.1_ASM854v1	NC_000853	Thermotoga maritima MSB8, complete sequence	6	1519912-1520474	5,6,5	PILER-CR,CRISPRCasFinder,CRT	no		cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	Orphan	GTTTCAATACTTCCTTAGAGGTATGGAAAC,GTTTCAATACTTCCTTAGAGGTATGGAAAC,GTTTCAATACTTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	7,8,8	8	Orphan	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	NA|75aa|up_0|NC_000853.1_1519002_1519227_-,NA	NA|137aa|up_9|NC_000853.1_1511183_1511594_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|358aa|up_8|NC_000853.1_1511608_1512682_-	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|387aa|up_7|NC_000853.1_1512682_1513843_-	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase	NA|402aa|up_6|NC_000853.1_1513852_1515058_-	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|237aa|up_5|NC_000853.1_1515073_1515784_-	TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA|217aa|up_4|NC_000853.1_1515776_1516427_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|295aa|up_3|NC_000853.1_1516423_1517308_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|237aa|up_2|NC_000853.1_1517292_1518003_-	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism]	NA|326aa|up_1|NC_000853.1_1518007_1518985_-	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|75aa|up_0|NC_000853.1_1519002_1519227_-	NA	NA|259aa|down_0|NC_000853.1_1520609_1521386_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|275aa|down_1|NC_000853.1_1521382_1522207_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|146aa|down_2|NC_000853.1_1522326_1522764_+	COG1633, COG1633, Uncharacterized conserved protein [Function unknown]	NA|141aa|down_3|NC_000853.1_1522725_1523148_-	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein	NA|290aa|down_4|NC_000853.1_1523175_1524045_+	COG1575, MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]	NA|207aa|down_5|NC_000853.1_1524050_1524671_+	pfam02517, Abi, CAAX protease self-immunity	NA|286aa|down_6|NC_000853.1_1524772_1525630_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|339aa|down_7|NC_000853.1_1525622_1526639_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|439aa|down_8|NC_000853.1_1526635_1527952_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|93aa|down_9|NC_000853.1_1527958_1528237_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCF_000008545.1_ASM854v1	NC_000853	Thermotoga maritima MSB8, complete sequence	7	1631789-1632016	6,6,7	CRT,PILER-CR,CRISPRCasFinder	no		cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	Orphan	TGTTTCCATACCTCTAAGGAAGTATTGAAAC,GTTTCAATACTTCCTTAGAGGTATGGAAAC,GTTTCCATACCTCTAAGGAAGTATTGAAAC	31,30,30	0	0	NA	NA	III-A:III-A:III-A	3,3,3	3	Orphan	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	NA|129aa|up_8|NC_000853.1_1622034_1622421_+,NA|219aa|down_4|NC_000853.1_1635567_1636224_-	NA|788aa|up_9|NC_000853.1_1619674_1622038_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|129aa|up_8|NC_000853.1_1622034_1622421_+	NA	NA|383aa|up_7|NC_000853.1_1622422_1623571_+	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|853aa|up_6|NC_000853.1_1623560_1626119_+	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|207aa|up_5|NC_000853.1_1626111_1626732_+	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion]	NA|208aa|up_4|NC_000853.1_1626749_1627373_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|278aa|up_3|NC_000853.1_1627356_1628190_+	PRK06222, PRK06222, sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein	NA|469aa|up_2|NC_000853.1_1628186_1629593_+	PRK12831, PRK12831, putative oxidoreductase; Provisional	NA|170aa|up_1|NC_000853.1_1629580_1630090_+	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|528aa|up_0|NC_000853.1_1630125_1631709_+	PRK13376, pyrB, bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional	NA|242aa|down_0|NC_000853.1_1632661_1633387_+	TIGR03855, NAD_NadX, aspartate dehydrogenase	NA|299aa|down_1|NC_000853.1_1633399_1634296_+	PRK09375, PRK09375, quinolinate synthase NadA	NA|274aa|down_2|NC_000853.1_1634300_1635122_+	TIGR00078, Probable_nicotinate-nucleotide_pyrophosphorylase, nicotinate-nucleotide pyrophosphorylase	NA|153aa|down_3|NC_000853.1_1635112_1635571_-	COG1728, COG1728, Uncharacterized protein conserved in bacteria [Function unknown]	NA|219aa|down_4|NC_000853.1_1635567_1636224_-	NA	NA|199aa|down_5|NC_000853.1_1636207_1636804_-	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|94aa|down_6|NC_000853.1_1636804_1637086_-	COG1550, COG1550, Uncharacterized protein conserved in bacteria [Function unknown]	NA|423aa|down_7|NC_000853.1_1637100_1638369_-	cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	NA|684aa|down_8|NC_000853.1_1638370_1640422_-	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|554aa|down_9|NC_000853.1_1640421_1642083_-	pfam09992, NAGPA, Phosphodiester glycosidase
GCF_000008545.1_ASM854v1	NC_000853	Thermotoga maritima MSB8, complete sequence	8	1779810-1780701	8,7,7	CRISPRCasFinder,CRT,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	Type III-D, Type III-A?,Type III-A,Type III-C,Type I-B,Type III-B	GTTTCCATACCTCTAAGGAATTATTGAAAC,GTTTCCATACCTCTAAGGAATTATTGAAAC,GTTTCAATAATTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	13,12,11	13	TypeIII-D,TypeIII-A?,TypeIII-A,TypeIII-C,TypeI-B,TypeIII-B	cas3HD,cas14k,TnpB_regular.1,cas3,DEDDh,csa3,cas14j,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas2,cas1,cas4,cas5,cas7,cas8b1,csx22,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas6	NA,NA|157aa|down_1|NC_000853.1_1781676_1782147_+,NA|272aa|down_2|NC_000853.1_1782146_1782962_+,csx22|192aa|down_3|NC_000853.1_1782943_1783519_-	cmr3gr5|331aa|up_9|NC_000853.1_1767984_1768977_-	COG1769, COG1769, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas10|801aa|up_8|NC_000853.1_1768973_1771376_-	COG1353, COG1353, Predicted CRISPR-associated polymerase [Defense mechanisms]	cmr1gr7|443aa|up_7|NC_000853.1_1771378_1772707_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas2|88aa|up_6|NC_000853.1_1772690_1772954_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|320aa|up_5|NC_000853.1_1772959_1773919_-	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas4|160aa|up_4|NC_000853.1_1773928_1774408_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|722aa|up_3|NC_000853.1_1774404_1776570_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|221aa|up_2|NC_000853.1_1776560_1777223_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7|300aa|up_1|NC_000853.1_1777225_1778125_-	cd09690, Cas7_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8b1|547aa|up_0|NC_000853.1_1778099_1779740_-	TIGR02556, hypothetical_protein_MM_0564, CRISPR-associated protein, TM1802 family	NA|117aa|down_0|NC_000853.1_1781335_1781686_+	smart00271, DnaJ, DnaJ molecular chaperone homology domain	NA|157aa|down_1|NC_000853.1_1781676_1782147_+	NA	NA|272aa|down_2|NC_000853.1_1782146_1782962_+	NA	csx22|192aa|down_3|NC_000853.1_1782943_1783519_-	NA	csm5gr7|380aa|down_4|NC_000853.1_1783491_1784631_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|293aa|down_5|NC_000853.1_1784627_1785506_-	TIGR01903, Hypothetical_protein	csm3gr7|248aa|down_6|NC_000853.1_1785502_1786246_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|141aa|down_7|NC_000853.1_1786259_1786682_-	COG1421, COG1421, CRISPR system related protein [Defense mechanisms]	cas10|718aa|down_8|NC_000853.1_1786696_1788850_-	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	cas6|251aa|down_9|NC_000853.1_1790522_1791275_-	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
