The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_002942	Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete sequence	3397754	913514	920354	3397754		Acinetobacter_phage(42.86%)	9	NA	NA
WP_010946569.1|913514_914291_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	48.2	3.3e-57
WP_010946570.1|914283_915318_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	47.6	3.5e-75
WP_010946571.1|915295_915874_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	1.0e-55
WP_010946572.1|915907_916633_-	LPS export ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.3	3.1e-17
WP_010946573.1|916629_917139_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010946574.1|917119_917689_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_011213328.1|917685_918213_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	47.7	1.4e-27
WP_010946576.1|918226_919189_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	34.1	4.2e-38
WP_010946577.1|919556_920354_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.8	1.3e-21
>prophage 2
NC_002942	Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete sequence	3397754	1302986	1308923	3397754		Staphylococcus_phage(50.0%)	6	NA	NA
WP_010946911.1|1302986_1304060_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	27.8	2.8e-30
WP_010946912.1|1304044_1304659_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	38.4	3.5e-22
WP_010946913.1|1304655_1305864_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.7	5.4e-99
WP_010946914.1|1305871_1306339_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.1	9.2e-23
WP_010946915.1|1306464_1308102_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.3	3.6e-154
WP_010946916.1|1308098_1308923_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	43.9	1.8e-53
>prophage 3
NC_002942	Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete sequence	3397754	2257929	2268053	3397754		Bacillus_phage(16.67%)	7	NA	NA
WP_010947735.1|2257929_2259618_-	S8 family serine peptidase	NA	A0A1B0T6A2	Bacillus_phage	30.4	8.0e-16
WP_015444337.1|2259749_2260757_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010947737.1|2260880_2262206_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	31.2	1.4e-47
WP_010947738.1|2262224_2263373_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	58.5	1.3e-126
WP_015444336.1|2263581_2264694_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	2.9e-51
WP_010947740.1|2264789_2265929_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.9	1.6e-23
WP_015444335.1|2266118_2268053_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.6	1.3e-147
>prophage 4
NC_002942	Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete sequence	3397754	2309881	2366483	3397754	transposase	Wolbachia_phage(33.33%)	54	NA	NA
WP_010947782.1|2309881_2311333_+|transposase	IS4-like element ISLpn5 family transposase	transposase	Q9JMP3	Wolbachia_phage	56.8	6.1e-158
WP_010947783.1|2311403_2312924_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	48.2	7.9e-124
WP_010947785.1|2313771_2314146_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010947786.1|2314343_2315951_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444248.1|2315953_2316445_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947788.1|2316455_2317292_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	48.9	4.9e-67
WP_010947789.1|2317884_2318976_-	DUF4917 family protein	NA	NA	NA	NA	NA
WP_010947790.1|2319207_2325153_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA	NA
WP_010947791.1|2325173_2327066_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_021437030.1|2327130_2327595_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015444244.1|2327598_2330319_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
WP_010947793.1|2330324_2331710_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
WP_010947794.1|2331706_2332129_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA	NA
WP_010947795.1|2332118_2332901_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA	NA
WP_010947796.1|2332893_2334705_-	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA	NA
WP_015444243.1|2334704_2335373_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA	NA
WP_010947798.1|2335388_2336384_-	conjugal transfer pilus assembly protein TraU	NA	NA	NA	NA	NA
WP_010947799.1|2336380_2336989_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA	NA
WP_027223818.1|2336985_2337327_-	TrbI F-type domain-containing protein	NA	NA	NA	NA	NA
WP_015444241.1|2337313_2339866_-	type IV secretion system protein TraC	NA	NA	NA	NA	NA
WP_010947801.1|2339877_2340228_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_015444240.1|2340241_2341528_-	IncF plasmid conjugative transfer pilus assembly protein TraB	NA	NA	NA	NA	NA
WP_010947803.1|2341529_2342243_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA	NA
WP_010947804.1|2342245_2342809_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA	NA
WP_010947805.1|2342812_2343106_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
WP_010947806.1|2343107_2343410_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010947807.1|2343424_2343661_-	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	52.9	2.5e-08
WP_025520140.1|2343674_2344052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947808.1|2343999_2344884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947809.1|2345032_2345737_+	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	28.1	9.7e-08
WP_016356978.1|2345885_2346560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010947811.1|2347008_2347581_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_015444236.1|2347564_2348062_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_010947813.1|2348054_2348642_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_010947814.1|2348646_2350782_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010947815.1|2350800_2351682_-	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_010947816.1|2351788_2351935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947817.1|2352126_2352303_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010947818.1|2352472_2352970_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010947819.1|2352959_2353739_-	DUF2063 domain-containing protein	NA	NA	NA	NA	NA
WP_010947820.1|2353731_2354586_-	DUF692 domain-containing protein	NA	NA	NA	NA	NA
WP_010947821.1|2354600_2354894_-	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
WP_010947822.1|2355083_2355605_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444234.1|2355909_2356368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444232.1|2356941_2357169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947824.1|2357326_2357848_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_010947825.1|2358019_2358574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010947826.1|2359007_2359208_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
WP_010947827.1|2359301_2359685_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010947828.1|2359738_2360692_-	Abi family protein	NA	A3QSC6	Clostridium_virus	31.8	4.8e-34
WP_015444229.1|2361201_2362620_+|transposase	IS4-like element ISLpn3 family transposase	transposase	Q9JMP3	Wolbachia_phage	32.9	2.3e-56
WP_010947829.1|2362652_2363828_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	21.2	5.2e-14
WP_010947830.1|2363880_2364906_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010947831.1|2365064_2366483_+|transposase	IS4-like element ISLpn4 family transposase	transposase	Q9JMP3	Wolbachia_phage	32.9	1.5e-55
