The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_002940	[Haemophilus] ducreyi 35000HP, complete sequence	1698955	75766	94828	1698955	head	Vibrio_phage(21.05%)	31	NA	NA
WP_010944152.1|75766_76684_+	AAA family ATPase	NA	A0A2I7S9C3	Vibrio_phage	44.6	3.2e-59
WP_010944153.1|76683_76917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944154.1|76929_77547_+	DUF3164 family protein	NA	A4JWM8	Burkholderia_virus	57.4	3.6e-67
WP_041603325.1|77557_77776_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041603327.1|78003_78168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944158.1|78170_78389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944159.1|78391_78595_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944160.1|78591_78927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944161.1|78935_79229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944162.1|79230_79968_+	DUF2786 domain-containing protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	35.4	6.7e-28
WP_010944163.1|79967_80243_+	hypothetical protein	NA	A0A2P0P8L3	Salmonella_phage	49.3	1.6e-11
WP_010944164.1|80320_80791_+	hypothetical protein	NA	A0A2H4JFV8	uncultured_Caudovirales_phage	43.2	1.1e-26
WP_010944165.1|80772_81141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944167.1|81118_81583_+	regulatory protein GemA	NA	Q6QIE7	Burkholderia_phage	31.5	8.6e-13
WP_041603328.1|81579_81915_+	transcriptional regulator	NA	A0A2I7S9J0	Vibrio_phage	39.1	8.6e-07
WP_010944169.1|82022_82544_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	68.4	1.3e-70
WP_010944171.1|82776_83007_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	74.6	9.4e-21
WP_010944172.1|83009_83294_+	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_010944174.1|83413_83644_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA	NA
WP_010944175.1|83640_83976_+	DUF2730 domain-containing protein	NA	NA	NA	NA	NA
WP_041603330.1|83979_84279_+	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	54.1	1.2e-20
WP_010944177.1|84301_84871_+	DUF3486 family protein	NA	M4MCR3	Vibrio_phage	46.4	5.9e-40
WP_010944178.1|84870_86430_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	61.5	1.6e-159
WP_010944179.1|86433_88038_+	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	49.7	1.1e-136
WP_010944180.1|89499_89943_+	phage virion morphogenesis protein	NA	G9BWH2	Planktothrix_phage	29.8	3.8e-10
WP_010944182.1|91185_92097_+|head	Mu-like prophage major head subunit gpT family protein	head	C9DGP2	Escherichia_phage	52.6	2.0e-82
WP_010944183.1|92171_92552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944184.1|92551_92971_+	DUF1320 family protein	NA	A0A0C4UR02	Shigella_phage	36.0	8.8e-17
WP_010944185.1|92970_93624_+	DUF1834 family protein	NA	C9DGP5	Escherichia_phage	39.8	1.5e-15
WP_010944186.1|93613_94354_+	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	50.6	1.6e-61
WP_010944187.1|94399_94828_+	hypothetical protein	NA	L7P7Y2	Pseudomonas_phage	40.5	3.7e-18
>prophage 2
NC_002940	[Haemophilus] ducreyi 35000HP, complete sequence	1698955	382033	404573	1698955	protease,capsid,head	Haemophilus_phage(36.0%)	33	NA	NA
WP_010944491.1|382033_382240_+	hypothetical protein	NA	F6MII8	Haemophilus_phage	47.4	8.5e-05
WP_010944492.1|382226_382571_+	hypothetical protein	NA	A0A0M3LQH1	Mannheimia_phage	54.9	7.0e-20
WP_010944493.1|382581_383199_+	DUF3164 family protein	NA	A0A0M3LQ92	Mannheimia_phage	79.9	2.7e-91
WP_041603377.1|383282_383501_+	ANR family transcriptional regulator	NA	A0A0M3LSH0	Mannheimia_phage	58.1	1.4e-05
WP_010944495.1|383504_383684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944496.1|383702_383999_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944497.1|383995_384199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050711635.1|384208_384478_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_041603379.1|384535_385102_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	73.4	4.5e-72
WP_010944500.1|385085_385514_+	regulatory protein GemA	NA	F6MIJ6	Haemophilus_phage	65.0	1.5e-43
WP_010944501.1|385827_386427_+	phage antirepressor Ant	NA	G9L6G1	Escherichia_phage	47.0	7.4e-25
WP_010944502.1|386437_386647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944503.1|386775_387198_+	hypothetical protein	NA	F6MIJ8	Haemophilus_phage	67.6	1.9e-51
WP_041603380.1|387285_387834_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	72.6	2.9e-76
WP_010944505.1|387838_388192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944506.1|388178_388412_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	88.0	4.7e-28
WP_010944507.1|388411_388801_+	DUF2681 domain-containing protein	NA	A0A0M3LP93	Mannheimia_phage	43.5	9.1e-16
WP_010944508.1|388849_389128_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944509.1|389124_389379_+	hypothetical protein	NA	A0A0M3LP87	Mannheimia_phage	54.8	2.4e-17
WP_010944510.1|389386_389887_+	DUF1804 family protein	NA	A0A0M3LQI8	Mannheimia_phage	90.4	8.5e-75
WP_010944512.1|391625_393263_+	DUF935 domain-containing protein	NA	B7SDN1	Haemophilus_phage	79.5	2.0e-253
WP_010944513.1|393246_394557_+|capsid	minor capsid protein	capsid	B7SDN5	Haemophilus_phage	67.1	2.1e-165
WP_010944514.1|394689_395106_+	phage virion morphogenesis protein	NA	A0A0M3LSP9	Mannheimia_phage	76.6	5.3e-54
WP_041603382.1|395360_396431_+|protease	phage protease	protease	B7SDN9	Haemophilus_phage	78.3	5.9e-150
WP_010944516.1|396430_397354_+|head	Mu-like prophage major head subunit gpT family protein	head	B7SDP1	Haemophilus_phage	82.8	4.6e-143
WP_010944517.1|397400_397688_+	hypothetical protein	NA	A0A0M3LPR6	Mannheimia_phage	70.0	1.9e-18
WP_010944518.1|397690_398077_+	DUF1320 domain-containing protein	NA	A0A2D1GNP0	Pseudomonas_phage	44.5	7.9e-20
WP_010944519.1|398073_398520_+	hypothetical protein	NA	A0A075CI80	Pseudomonas_phage	32.2	2.6e-14
WP_010944520.1|398549_399293_+	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	49.4	1.0e-60
WP_010944521.1|399350_399770_+	hypothetical protein	NA	A0A2D1GNY5	Pseudomonas_phage	39.7	1.2e-21
WP_010944522.1|399946_400201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944523.1|400215_403575_+	tape measure protein	NA	A0A2D1GNK1	Pseudomonas_phage	30.4	1.0e-107
WP_010944524.1|403574_404573_+	hypothetical protein	NA	A0A125RND5	Pseudomonas_phage	30.9	2.9e-34
>prophage 3
NC_002940	[Haemophilus] ducreyi 35000HP, complete sequence	1698955	419177	434435	1698955		Streptomyces_phage(14.29%)	11	NA	NA
WP_010944540.1|419177_422654_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	37.1	3.5e-191
WP_010944541.1|422765_423848_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010944542.1|423848_424952_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_010944544.1|425278_426778_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.7	8.0e-52
WP_010944545.1|426847_427477_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A218M2Y8	Acidovorax_phage	33.6	2.2e-11
WP_010944546.1|427476_427899_-	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	37.7	4.3e-19
WP_010944547.1|427891_428566_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	47.7	3.2e-53
WP_010944550.1|428930_429842_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	48.1	1.1e-64
WP_010944551.1|429943_430231_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_010944552.1|430359_431787_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010944553.1|431864_434435_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	34.1	4.2e-125
>prophage 4
NC_002940	[Haemophilus] ducreyi 35000HP, complete sequence	1698955	855163	870207	1698955		Bacillus_phage(12.5%)	15	NA	NA
WP_010944992.1|855163_858760_+	exodeoxyribonuclease V subunit beta	NA	A7KV33	Bacillus_phage	21.5	1.0e-12
WP_010944993.1|858835_859393_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	46.1	3.8e-31
WP_041603472.1|859456_860794_-	outer membrane protein transport protein	NA	NA	NA	NA	NA
WP_010944996.1|861221_861674_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010944997.1|861727_862948_+	IscS subfamily cysteine desulfurase	NA	A0A2K9L679	Tupanvirus	24.7	8.3e-15
WP_010944998.1|862995_863379_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	75.8	1.7e-51
WP_010944999.1|863512_863836_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	46.7	9.8e-24
WP_010945000.1|863844_864366_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_010945001.1|864410_865043_+	DUF2625 family protein	NA	NA	NA	NA	NA
WP_010945002.1|865094_866948_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.8	4.8e-107
WP_010945003.1|866959_867301_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_041603474.1|867300_867495_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_010945005.1|867533_868343_-	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_010945006.1|868355_869594_-	multifunctional CCA addition/repair protein	NA	S5MVS8	Sinorhizobium_phage	46.0	1.6e-82
WP_010945007.1|869697_870207_-	peptidyl-prolyl cis-trans isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	35.4	2.5e-13
>prophage 5
NC_002940	[Haemophilus] ducreyi 35000HP, complete sequence	1698955	943331	949844	1698955		Staphylococcus_phage(50.0%)	7	NA	NA
WP_010945065.1|943331_944438_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.7	3.7e-46
WP_010945066.1|944452_945100_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.9	8.0e-41
WP_010945067.1|945155_946361_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	8.5e-105
WP_010945068.1|946470_946932_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.1	8.7e-42
WP_010945070.1|947019_947508_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010945071.1|947515_948451_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.8	4.1e-38
WP_041603676.1|948542_949844_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	32.6	2.0e-30
>prophage 6
NC_002940	[Haemophilus] ducreyi 35000HP, complete sequence	1698955	1262079	1269206	1698955		Pseudomonas_phage(42.86%)	11	NA	NA
WP_010945352.1|1262079_1262430_-	DNA-binding protein	NA	J9SGX4	Pseudomonas_phage	35.2	1.7e-13
WP_010945353.1|1262547_1262949_-	regulatory protein GemA	NA	F8TVB3	EBPR_siphovirus	31.6	6.5e-09
WP_010945354.1|1262938_1263313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010945355.1|1263294_1263771_-	hypothetical protein	NA	A0A2H4JFV8	uncultured_Caudovirales_phage	44.4	2.2e-27
WP_010945357.1|1263816_1263978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010945358.1|1263974_1264187_-	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010945359.1|1264183_1264708_-	host-nuclease inhibitor Gam family protein	NA	F6MIJ0	Haemophilus_phage	48.8	2.7e-39
WP_010945360.1|1264682_1264913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041603531.1|1264905_1266078_-	AAA family ATPase	NA	A4JWN1	Burkholderia_virus	55.8	1.6e-111
WP_010945364.1|1267911_1268874_-	hypothetical protein	NA	J9SND0	Pseudomonas_phage	26.7	2.6e-24
WP_010945365.1|1268903_1269206_-	helix-turn-helix domain-containing protein	NA	A0A0S4L7B4	Pseudomonas_phage	41.8	9.5e-13
>prophage 7
NC_002940	[Haemophilus] ducreyi 35000HP, complete sequence	1698955	1273270	1291256	1698955	holin	Pseudomonas_phage(75.0%)	22	NA	NA
WP_041603709.1|1273270_1273525_-	hypothetical protein	NA	B7SDP6	Haemophilus_phage	51.9	9.7e-19
WP_010945377.1|1273741_1274116_+|holin	putative holin	holin	Q6QIC8	Burkholderia_phage	52.2	8.1e-22
WP_010945378.1|1274118_1274727_+	transglycosylase SLT domain-containing protein	NA	J9SH25	Pseudomonas_phage	60.4	5.5e-60
WP_041603711.1|1274921_1275152_+	hypothetical protein	NA	H6V8N0	Pseudomonas_phage	45.5	9.4e-05
WP_010945380.1|1275254_1275605_+	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	28.2	5.9e-06
WP_010945381.1|1275606_1275912_+	hypothetical protein	NA	Q5ZQY7	Pseudomonas_phage	52.0	5.1e-22
WP_010945382.1|1275921_1276461_+	DUF3486 family protein	NA	A4JWJ3	Burkholderia_virus	52.2	8.9e-46
WP_010945383.1|1276460_1278080_+	hypothetical protein	NA	Q6QIC1	Burkholderia_phage	64.6	4.0e-182
WP_010945384.1|1278082_1279594_+	DUF935 family protein	NA	Q5ZQY4	Pseudomonas_phage	52.4	1.9e-141
WP_010945385.1|1279586_1280837_+	hypothetical protein	NA	J9STS2	Pseudomonas_phage	46.1	8.9e-105
WP_010945386.1|1280943_1281435_+	phage virion morphogenesis protein	NA	Q5ZQY1	Pseudomonas_phage	38.4	6.3e-30
WP_010945387.1|1281657_1282674_+	hypothetical protein	NA	Q5ZQY0	Pseudomonas_phage	61.2	3.0e-42
WP_010945388.1|1282670_1283039_+	DUF2190 family protein	NA	Q5ZQX8	Pseudomonas_phage	42.9	6.6e-16
WP_010945389.1|1283089_1284016_+	hypothetical protein	NA	A0A0S4L2T7	Pseudomonas_phage	63.6	1.1e-107
WP_010945390.1|1284024_1284534_+	DUF1320 domain-containing protein	NA	Q5ZQX5	Pseudomonas_phage	42.9	4.5e-31
WP_018652950.1|1284526_1284979_+	hypothetical protein	NA	A0A0S4L2X9	Pseudomonas_phage	32.7	2.1e-16
WP_005597522.1|1284975_1285233_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944520.1|1285232_1285976_+	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	49.4	1.0e-60
WP_010944521.1|1286033_1286453_+	hypothetical protein	NA	A0A2D1GNY5	Pseudomonas_phage	39.7	1.2e-21
WP_010944522.1|1286629_1286884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944523.1|1286898_1290258_+	tape measure protein	NA	A0A2D1GNK1	Pseudomonas_phage	30.4	1.0e-107
WP_010944524.1|1290257_1291256_+	hypothetical protein	NA	A0A125RND5	Pseudomonas_phage	30.9	2.9e-34
>prophage 8
NC_002940	[Haemophilus] ducreyi 35000HP, complete sequence	1698955	1516763	1527345	1698955		uncultured_Caudovirales_phage(28.57%)	10	NA	NA
WP_010945590.1|1516763_1518056_-	purine permease	NA	Q9KX94	Enterobacteria_phage	28.4	1.5e-22
WP_010945591.1|1518133_1519972_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_041603561.1|1520058_1520610_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010945593.1|1520795_1521461_+	BAX inhibitor protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	54.8	1.8e-48
WP_010945594.1|1521522_1521858_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	56.8	1.0e-28
WP_010945595.1|1521928_1522834_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010945596.1|1522830_1523589_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	26.6	3.0e-15
WP_010945597.1|1523794_1524334_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.0	6.0e-26
WP_010945598.1|1524361_1526425_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	35.8	2.9e-44
WP_041603563.1|1526436_1527345_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.5	5.2e-22
