assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000007885.1_ASM788v1	NC_005810	Yersinia pestis biovar Microtus str. 91001, complete sequence	1	1223356-1223625	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		cas3,csa3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	4,4,3	4	Orphan	cas3,csa3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA|84aa|down_7|NC_005810.1_1236960_1237212_-,NA|80aa|down_8|NC_005810.1_1237250_1237490_-	NA|272aa|up_9|NC_005810.1_1208657_1209473_-	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]	NA|353aa|up_8|NC_005810.1_1209482_1210541_-	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|657aa|up_7|NC_005810.1_1210555_1212526_-	pfam09863, DUF2090, Uncharacterized protein conserved in bacteria (DUF2090)	NA|378aa|up_6|NC_005810.1_1212557_1213691_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|343aa|up_5|NC_005810.1_1213714_1214743_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|516aa|up_4|NC_005810.1_1214754_1216302_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|310aa|up_3|NC_005810.1_1216350_1217280_-	cd19968, PBP1_ABC_IbpA-like, periplasmic sugar-binding protein IbpA of an ABC transporter and similar proteins	NA|642aa|up_2|NC_005810.1_1218684_1220610_-	COG3962, COG3962, Acetolactate synthase [Amino acid transport and metabolism]	NA|509aa|up_1|NC_005810.1_1220644_1222171_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|285aa|up_0|NC_005810.1_1222497_1223352_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|183aa|down_0|NC_005810.1_1223985_1224534_+	COG3477, COG3477, Predicted periplasmic/secreted protein [Function unknown]	NA|1993aa|down_1|NC_005810.1_1224940_1230919_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|771aa|down_2|NC_005810.1_1231026_1233339_+	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C	NA|82aa|down_3|NC_005810.1_1233551_1233797_-	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|134aa|down_4|NC_005810.1_1235318_1235720_+	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|134aa|down_5|NC_005810.1_1235951_1236353_+	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|191aa|down_6|NC_005810.1_1236364_1236937_-	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|84aa|down_7|NC_005810.1_1236960_1237212_-	NA	NA|80aa|down_8|NC_005810.1_1237250_1237490_-	NA	NA|639aa|down_9|NC_005810.1_1238298_1240215_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain
GCF_000007885.1_ASM788v1	NC_005810	Yersinia pestis biovar Microtus str. 91001, complete sequence	2	1475549-1475670	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	CTTAATGCCAATATTAATCGACATAATCAATTG	33	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA|73aa|down_0|NC_005810.1_1476026_1476245_+	NA|227aa|up_9|NC_005810.1_1462530_1463211_-	PRK03641, PRK03641, DUF2057 family protein	NA|139aa|up_8|NC_005810.1_1463526_1463943_+	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|106aa|up_7|NC_005810.1_1464051_1464369_-	PRK14129, PRK14129, heat shock protein HspQ; Provisional	NA|397aa|up_6|NC_005810.1_1464429_1465620_-	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA|93aa|up_5|NC_005810.1_1465713_1465992_+	PRK14426, PRK14426, acylphosphatase; Provisional	NA|110aa|up_4|NC_005810.1_1466043_1466373_-	COG2920, DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit [Inorganic ion transport and metabolism]	NA|341aa|up_3|NC_005810.1_1469226_1470249_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|260aa|up_2|NC_005810.1_1470248_1471028_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|806aa|up_1|NC_005810.1_1471978_1474396_-	pfam01565, FAD_binding_4, FAD binding domain	NA|249aa|up_0|NC_005810.1_1474549_1475296_-	PRK06172, PRK06172, SDR family oxidoreductase	NA|73aa|down_0|NC_005810.1_1476026_1476245_+	NA	NA|175aa|down_1|NC_005810.1_1476508_1477033_+	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]	NA|428aa|down_2|NC_005810.1_1477022_1478306_+	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II	NA|246aa|down_3|NC_005810.1_1478307_1479045_+	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|413aa|down_4|NC_005810.1_1479060_1480299_+	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]	NA|240aa|down_5|NC_005810.1_1480291_1481011_+	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]	NA|251aa|down_6|NC_005810.1_1481012_1481765_+	PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated	NA|263aa|down_7|NC_005810.1_1481767_1482556_+	cd05233, SDR_c, classical (c) SDRs	NA|147aa|down_8|NC_005810.1_1482642_1483083_+	pfam13924, Lipocalin_5, Lipocalin-like domain	NA|83aa|down_9|NC_005810.1_1483120_1483369_+	PRK07117, PRK07117, acyl carrier protein; Validated
GCF_000007885.1_ASM788v1	NC_005810	Yersinia pestis biovar Microtus str. 91001, complete sequence	3	2539218-2539426	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,csa3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type I-F	ATTTCTAAGCTGCCTGTGCGGCAGTGAAC,ATTTCTAAGCTGCCTGTGCGGCAGTGAACTC,ATTTCTAAGCTGCCTGTGCGGCAGTGAACTCG	29,31,32	0	0	NA	NA	I-F:I-F:I-F	3,3,2	3	TypeI-F	cas3,csa3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|70aa|up_9|NC_005810.1_2526956_2527166_-,NA|425aa|down_1|NC_005810.1_2541594_2542869_-,NA|372aa|down_2|NC_005810.1_2542907_2544023_-	NA|70aa|up_9|NC_005810.1_2526956_2527166_-	NA	NA|453aa|up_8|NC_005810.1_2527289_2528648_+	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|168aa|up_7|NC_005810.1_2528694_2529198_+	COG1795, COG1795, Formaldehyde-activating enzyme nesessary for methanogenesis [Energy    production and conversion]	NA|340aa|up_6|NC_005810.1_2529208_2530228_+	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	cas6f|185aa|up_5|NC_005810.1_2530305_2530860_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|335aa|up_4|NC_005810.1_2530870_2531875_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|317aa|up_3|NC_005810.1_2531892_2532843_-	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|449aa|up_2|NC_005810.1_2532839_2534186_-	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	cas3f|1096aa|up_1|NC_005810.1_2534594_2537882_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|327aa|up_0|NC_005810.1_2537878_2538859_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|415aa|down_0|NC_005810.1_2539761_2541006_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|425aa|down_1|NC_005810.1_2541594_2542869_-	NA	NA|372aa|down_2|NC_005810.1_2542907_2544023_-	NA	NA|313aa|down_3|NC_005810.1_2544145_2545084_-	pfam08950, DUF1861, Protein of unknown function (DUF1861)	NA|352aa|down_4|NC_005810.1_2545110_2546166_-	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase	NA|275aa|down_5|NC_005810.1_2546312_2547137_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|292aa|down_6|NC_005810.1_2547137_2548013_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|429aa|down_7|NC_005810.1_2548121_2549408_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|347aa|down_8|NC_005810.1_2549679_2550720_+	cd06279, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria	NA|463aa|down_9|NC_005810.1_2550736_2552125_+	PRK15414, PRK15414, phosphomannomutase
GCF_000007885.1_ASM788v1	NC_005810	Yersinia pestis biovar Microtus str. 91001, complete sequence	4	3473543-3473655	4	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	CTTCACTCGGCTGCTCAAATGTGCTTT	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|1407aa|up_9|NC_005810.1_3457235_3461456_-	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|1343aa|up_8|NC_005810.1_3461584_3465613_-	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|123aa|up_7|NC_005810.1_3465955_3466324_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|166aa|up_6|NC_005810.1_3466390_3466888_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|235aa|up_5|NC_005810.1_3467252_3467957_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|143aa|up_4|NC_005810.1_3467960_3468389_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|182aa|up_3|NC_005810.1_3468579_3469125_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|128aa|up_2|NC_005810.1_3469126_3469510_-	PRK05740, secE, preprotein translocase subunit SecE; Reviewed	NA|395aa|up_1|NC_005810.1_3469760_3470945_-	PRK00049, PRK00049, elongation factor Tu; Reviewed	NA|452aa|up_0|NC_005810.1_3471978_3473333_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|879aa|down_0|NC_005810.1_3474074_3476711_-	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|388aa|down_1|NC_005810.1_3477084_3478248_-	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|335aa|down_2|NC_005810.1_3478498_3479503_+	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|259aa|down_3|NC_005810.1_3479668_3480445_+	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|458aa|down_4|NC_005810.1_3480611_3481985_+	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|831aa|down_5|NC_005810.1_3482583_3485076_+	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|206aa|down_6|NC_005810.1_3485297_3485915_+	pfam06438, HasA, Heme-binding protein A (HasA)	NA|601aa|down_7|NC_005810.1_3486080_3487883_+	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|443aa|down_8|NC_005810.1_3487958_3489287_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|268aa|down_9|NC_005810.1_3489351_3490155_+	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]
