bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_002944	Mycobacterium avium subsp. paratuberculosis K-10, complete sequence	6.1|3124789|29|NC_002944|CRISPRCasFinder	NC_002944.2	Mycobacterium avium subsp. paratuberculosis K-10, complete sequence	100.00	29	0	0	1	29	3859784	3859756	1189686-1189766|1862514-1862612|2156137-2156238|2920331-2920408|3095564-3095634|3124763-3124843|3804563-3804653|4641388-4641495	9e-08	47.5	1.0	GCGCGGCGATCGCAAGCGCGGCGCAGCCG	3859756-3859784	CGGCTGCGCCGCGCTTGCGATCGCCGCGC	0
NC_002944	Mycobacterium avium subsp. paratuberculosis K-10, complete sequence	8.1|4641412|18|NC_002944|CRISPRCasFinder	NC_002944.2	Mycobacterium avium subsp. paratuberculosis K-10, complete sequence	100.00	18	0	0	1	18	189428	189411	1189686-1189766|1862514-1862612|2156137-2156238|2920331-2920408|3095564-3095634|3124763-3124843|3804563-3804653|4641388-4641495	0.017	30.1	1.0	CGCCGGCCAAGAAGGCAC	189411-189428	GTGCCTTCTTGGCCGGCG	0
NC_002944	Mycobacterium avium subsp. paratuberculosis K-10, complete sequence	8.1|4641412|18|NC_002944|CRISPRCasFinder	NC_002944.2	Mycobacterium avium subsp. paratuberculosis K-10, complete sequence	94.44	18	1	0	1	18	1937907	1937924	1189686-1189766|1862514-1862612|2156137-2156238|2920331-2920408|3095564-3095634|3124763-3124843|3804563-3804653|4641388-4641495	0.15	26.9	1.0	CGCCGGCCAAGAAGGCAC	1937907-1937924	CGCTGGCCAAGAAGGCAC	1
