assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000007645.1_ASM764v1	NC_004461	Staphylococcus epidermidis ATCC 12228, complete sequence	1	587189-587284	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,WYL	Orphan	CATAAGTGACACAAGCAATTAAAAATTGCAGTG	33	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA|79aa|up_9|NC_004461.1_580891_581128_-,NA|52aa|up_6|NC_004461.1_583285_583441_+,NA|53aa|down_5|NC_004461.1_591106_591265_-	NA|79aa|up_9|NC_004461.1_580891_581128_-	NA	NA|196aa|up_8|NC_004461.1_581341_581929_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|167aa|up_7|NC_004461.1_582199_582700_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|52aa|up_6|NC_004461.1_583285_583441_+	NA	NA|141aa|up_5|NC_004461.1_583624_584047_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_4|NC_004461.1_584207_584924_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|181aa|up_3|NC_004461.1_585004_585547_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|108aa|up_2|NC_004461.1_585729_586053_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|118aa|up_1|NC_004461.1_586195_586549_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_0|NC_004461.1_586722_587103_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|129aa|down_0|NC_004461.1_587362_587749_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NC_004461.1_587741_588038_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NC_004461.1_588290_589316_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NC_004461.1_589308_590004_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|271aa|down_4|NC_004461.1_590024_590837_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|53aa|down_5|NC_004461.1_591106_591265_-	NA	NA|64aa|down_6|NC_004461.1_591439_591631_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|287aa|down_7|NC_004461.1_591696_592557_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_8|NC_004461.1_592878_593640_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_9|NC_004461.1_593734_595042_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_000007645.1_ASM764v1	NC_004461	Staphylococcus epidermidis ATCC 12228, complete sequence	2	1998542-1998631	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,WYL	Orphan	TTTACATTTTTAAAAAATGCATAAGAGCCACT	32	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA,NA	NA|134aa|up_9|NC_004461.1_1987582_1987984_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|139aa|up_8|NC_004461.1_1988052_1988469_-	pfam11070, DUF2871, Protein of unknown function (DUF2871)	NA|100aa|up_7|NC_004461.1_1988682_1988982_-	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins	NA|90aa|up_6|NC_004461.1_1989005_1989275_-	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins	NA|316aa|up_5|NC_004461.1_1991140_1992088_+	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|482aa|up_4|NC_004461.1_1992177_1993623_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|126aa|up_3|NC_004461.1_1993776_1994154_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|702aa|up_2|NC_004461.1_1995316_1997422_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|141aa|up_1|NC_004461.1_1997494_1997917_+	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only]	NA|117aa|up_0|NC_004461.1_1998107_1998458_+	pfam16230, DUF4889, Domain of unknown function (DUF4889)	NA|427aa|down_0|NC_004461.1_1998680_1999961_-	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional	NA|122aa|down_1|NC_004461.1_2000125_2000491_-	pfam11337, DUF3139, Protein of unknown function (DUF3139)	NA|210aa|down_2|NC_004461.1_2000614_2001244_-	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN	NA|149aa|down_3|NC_004461.1_2001408_2001855_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|388aa|down_4|NC_004461.1_2002559_2003723_-	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|219aa|down_5|NC_004461.1_2003979_2004636_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|345aa|down_6|NC_004461.1_2004664_2005699_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|151aa|down_7|NC_004461.1_2005708_2006161_-	pfam13185, GAF_2, GAF domain	NA|226aa|down_8|NC_004461.1_2006180_2006858_-	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit	NA|197aa|down_9|NC_004461.1_2006850_2007441_-	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion]
