The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_004070	Streptococcus pyogenes MGAS315, complete sequence	1900521	36872	49261	1900521		Synechococcus_phage(28.57%)	8	NA	NA
WP_011106567.1|36872_40598_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.7	3.9e-39
WP_009880323.1|40831_42286_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
WP_009880322.1|42313_43336_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	41.7	2.4e-63
WP_002986700.1|43503_44058_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	2.4e-25
WP_011054093.1|44241_45789_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	3.4e-45
WP_011054094.1|45847_46972_-	SH3 domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	1.3e-06
WP_032461289.1|47226_48492_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_030127619.1|48769_49261_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	2.5e-18
>prophage 2
NC_004070	Streptococcus pyogenes MGAS315, complete sequence	1900521	326888	332922	1900521		Streptococcus_phage(100.0%)	8	NA	NA
WP_011054219.1|326888_327524_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.7e-65
WP_011054220.1|327541_328417_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	47.6	1.5e-71
WP_011054221.1|329080_329404_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	62.3	1.0e-28
WP_011054222.1|329408_330272_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	74.7	1.9e-114
WP_002985833.1|330298_330691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054223.1|330737_331367_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002995120.1|331664_332021_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	66.7	2.8e-40
WP_011054224.1|332094_332922_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.5	3.8e-128
>prophage 3
NC_004070	Streptococcus pyogenes MGAS315, complete sequence	1900521	594234	604838	1900521		Streptococcus_phage(57.14%)	9	NA	NA
WP_011054348.1|594234_596445_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	69.1	2.9e-268
WP_011054349.1|596552_597716_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	5.8e-143
WP_002985140.1|597712_598399_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_002985136.1|598492_599659_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
WP_011054350.1|599719_600061_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	39.3	1.3e-18
WP_002985132.1|600281_601634_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.0	4.5e-30
WP_002992648.1|601713_602991_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_011054351.1|603020_603461_-	membrane protein	NA	NA	NA	NA	NA
WP_011054352.1|603695_604838_+	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
>prophage 4
NC_004070	Streptococcus pyogenes MGAS315, complete sequence	1900521	749212	808379	1900521	terminase,integrase,holin,protease,capsid,tRNA,tail,portal	Streptococcus_phage(82.0%)	73	757017:757034	802339:802356
WP_011017350.1|749212_750409_-|integrase	site-specific integrase	integrase	A3F610	Streptococcus_phage	99.0	3.9e-227
WP_011017351.1|750719_751460_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A3F611	Streptococcus_phage	100.0	1.6e-130
WP_011017352.1|751470_751863_-	hypothetical protein	NA	A3F612	Streptococcus_phage	68.7	2.2e-38
WP_011017353.1|751866_752217_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SAD3	Streptococcus_phage	63.5	1.2e-35
WP_011017354.1|752505_752781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054420.1|752815_753028_+	helix-turn-helix transcriptional regulator	NA	M1Q1B4	Streptococcus_phage	52.9	1.7e-13
WP_011106801.1|753355_753865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011017357.1|753906_754626_+	ORF6C domain-containing protein	NA	A3F617	Streptococcus_phage	78.7	4.6e-106
WP_011054421.1|754699_754957_+	hypothetical protein	NA	A3F618	Streptococcus_phage	98.8	5.4e-41
WP_011017359.1|755049_755241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032461348.1|755361_755550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011106800.1|755521_756877_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	84.7	9.3e-209
WP_011054422.1|756869_757631_+	conserved phage C-terminal domain-containing protein	NA	A0A220GFI5	Streptococcus_phage	55.3	1.5e-27
757017:757034	attL	AATGGTTGGCATGACAAA	NA	NA	NA	NA
WP_011054424.1|758442_758670_+	hypothetical protein	NA	C5J991	Streptococcus_phage	47.9	2.7e-12
WP_011054425.1|758683_758890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054426.1|758906_759341_+	hypothetical protein	NA	Q938M1	Temperate_phage	57.3	6.5e-31
WP_011054427.1|759337_759622_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	88.3	3.6e-38
WP_011054428.1|759623_760256_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	65.7	3.4e-81
WP_011054429.1|760260_760773_+	DUF1642 domain-containing protein	NA	A0A141E0J6	Streptococcus_phage	42.5	4.1e-24
WP_011054431.1|760938_761220_+	hypothetical protein	NA	A3F632	Streptococcus_phage	92.2	4.5e-33
WP_011054432.1|761216_761555_+	helix-turn-helix transcriptional regulator	NA	A3F633	Streptococcus_phage	92.0	1.5e-54
WP_011054433.1|761556_762384_+	prohibitin family protein	NA	A3F634	Streptococcus_phage	99.6	8.7e-117
WP_011017373.1|762398_762800_+	hypothetical protein	NA	A3F635	Streptococcus_phage	100.0	2.7e-71
WP_011054435.1|762959_763535_+|integrase	site-specific integrase	integrase	A3F636	Streptococcus_phage	99.5	7.4e-107
WP_011017375.1|763688_763982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011017376.1|764039_764243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011017377.1|764268_764655_+	hypothetical protein	NA	A3F638	Streptococcus_phage	93.0	1.4e-64
WP_011054436.1|764680_764953_+	HNH endonuclease	NA	A3F639	Streptococcus_phage	95.6	4.8e-48
WP_011017379.1|765093_765411_+|terminase	P27 family phage terminase small subunit	terminase	A3F640	Streptococcus_phage	99.0	3.9e-49
WP_011017380.1|765423_767154_+|terminase	terminase large subunit	terminase	A3F641	Streptococcus_phage	97.0	0.0e+00
WP_032461344.1|767144_767369_+	hypothetical protein	NA	A3F642	Streptococcus_phage	97.3	2.0e-36
WP_011017381.1|767521_768709_+|portal	phage portal protein	portal	A3F643	Streptococcus_phage	96.2	5.6e-218
WP_011017382.1|768689_769496_+|protease	Clp protease ClpP	protease	A3F644	Streptococcus_phage	98.1	4.6e-147
WP_011017383.1|769512_770646_+|capsid	phage major capsid protein	capsid	A3F645	Streptococcus_phage	96.8	3.2e-202
WP_011017384.1|770659_770833_+	hypothetical protein	NA	A3F646	Streptococcus_phage	94.7	6.4e-22
WP_011054437.1|770832_771141_+	hypothetical protein	NA	A3F647	Streptococcus_phage	98.0	7.8e-47
WP_011017386.1|771133_771496_+	hypothetical protein	NA	A3F648	Streptococcus_phage	97.5	1.1e-60
WP_011017387.1|771497_771896_+	HK97 gp10 family phage protein	NA	A3F649	Streptococcus_phage	100.0	2.9e-70
WP_011017388.1|771888_772269_+	hypothetical protein	NA	A3F650	Streptococcus_phage	99.2	7.4e-63
WP_011017389.1|772280_772865_+|tail	tail protein	tail	A3F651	Streptococcus_phage	90.2	3.1e-92
WP_011017390.1|772957_773260_+	hypothetical protein	NA	A3F652	Streptococcus_phage	96.0	1.8e-48
WP_011054439.1|773485_777586_+|tail	phage tail tape measure protein	tail	A3F654	Streptococcus_phage	68.4	0.0e+00
WP_011017392.1|777598_778369_+|tail	phage tail family protein	tail	A3F655	Streptococcus_phage	87.5	2.1e-128
WP_011054440.1|778365_780417_+|tail	phage tail protein	tail	A3F656	Streptococcus_phage	85.3	0.0e+00
WP_011054441.1|780413_781421_+	hyaluronoglucosaminidase	NA	Q938K0	Temperate_phage	61.4	4.6e-104
WP_011054442.1|781430_783335_+	gp58-like family protein	NA	Q938J9	Temperate_phage	83.8	1.5e-212
WP_002988448.1|783346_783775_+	DUF1617 family protein	NA	Q938J8	Temperate_phage	84.3	8.1e-58
WP_011054443.1|783777_784410_+	hypothetical protein	NA	Q938J7	Temperate_phage	49.5	2.0e-44
WP_011017397.1|784421_784694_+	hypothetical protein	NA	A7J2B2	Streptococcus_phage	91.0	5.5e-36
WP_011054444.1|784690_784918_+|holin	phage holin	holin	A7J2B3	Streptococcus_phage	98.7	7.6e-31
WP_011054445.1|785033_786242_+	glucosaminidase domain-containing protein	NA	Q938J4	Temperate_phage	87.5	2.9e-214
WP_011054446.1|786357_786714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054447.1|786771_787011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054448.1|787274_787526_-	hypothetical protein	NA	A3F666	Streptococcus_phage	96.4	2.8e-42
WP_011054449.1|787666_787813_-	hypothetical protein	NA	A3F667	Streptococcus_phage	97.9	4.0e-17
WP_011054450.1|787966_788176_+	helix-turn-helix transcriptional regulator	NA	A3F668	Streptococcus_phage	100.0	1.2e-30
WP_029714017.1|788374_788557_+	hypothetical protein	NA	A3F673	Streptococcus_phage	71.7	1.0e-17
WP_011054451.1|789309_791142_+	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	41.0	2.2e-19
WP_187145729.1|791574_793050_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_011054453.1|793202_793640_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_011054454.1|793769_794789_+	YeiH family putative sulfate export transporter	NA	NA	NA	NA	NA
WP_011054455.1|794995_795421_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002989934.1|795447_795939_+	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA	NA
WP_002984844.1|795955_796765_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_011054457.1|796761_797589_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_011054458.1|797724_799374_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	33.3	1.8e-12
WP_002984836.1|799377_800166_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011017728.1|800159_801206_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_011054459.1|801318_802689_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
802339:802356	attR	TTTGTCATGCCAACCATT	NA	NA	NA	NA
WP_011054460.1|802818_804615_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_002989923.1|804798_805401_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_011054461.1|805525_806935_+	dipeptidase PepV	NA	NA	NA	NA	NA
WP_011054462.1|807002_808379_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
>prophage 5
NC_004070	Streptococcus pyogenes MGAS315, complete sequence	1900521	943909	1021697	1900521	terminase,integrase,head,holin,capsid,protease,tRNA,tail,portal	Streptococcus_phage(56.14%)	85	969290:969305	1025822:1025837
WP_011054534.1|943909_944794_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_011054535.1|944909_946250_-	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_011054536.1|946346_947303_-	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_002993908.1|947313_947910_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_011054537.1|948001_950638_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002989664.1|950652_951354_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	4.9e-36
WP_002984482.1|951471_952014_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002984480.1|952156_952798_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002994467.1|952960_953449_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002984476.1|953459_953660_-	CsbD family protein	NA	J7KJ36	Streptococcus_phage	50.0	1.8e-07
WP_002984475.1|953700_954240_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002984473.1|954252_954441_-	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_011106783.1|954451_955063_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_002984469.1|955099_955348_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_002989648.1|955710_958029_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.2	3.5e-131
WP_002992407.1|958558_959881_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_011054539.1|960000_961236_+	cation diffusion facilitator family transporter	NA	NA	NA	NA	NA
WP_011054540.1|961605_962379_-	CAMP factor pore-forming toxin Cfa	NA	NA	NA	NA	NA
WP_002989634.1|962748_963585_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002984457.1|963600_964230_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	1.3e-27
WP_011054541.1|964239_964881_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_002989626.1|964987_965323_-	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_002984451.1|965518_967333_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.9	5.2e-98
WP_002984449.1|967508_968066_-	signal peptidase I	NA	NA	NA	NA	NA
WP_011054543.1|968283_969786_-	pyruvate kinase	NA	NA	NA	NA	NA
969290:969305	attL	GCGATATCTTTGTCGA	NA	NA	NA	NA
WP_011054544.1|969848_970862_-	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_011054545.1|970941_974052_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	29.8	2.2e-120
WP_002989617.1|974236_974608_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002984437.1|974607_975306_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.3	6.6e-09
WP_002984433.1|975315_976101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002989607.1|976231_976846_-	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	52.3	6.2e-51
WP_011054546.1|977436_977625_-	hypothetical protein	NA	A3F673	Streptococcus_phage	84.7	1.2e-21
WP_002988472.1|977737_978520_-	enterotoxin type C3 EntC3	NA	A0A097PAT7	Streptococcus_pyogenes_phage	45.8	4.3e-49
WP_011054547.1|978732_979857_-	Fic family protein	NA	D7RWK9	Brochothrix_phage	48.8	2.0e-92
WP_011054548.1|979994_981203_-	glucosaminidase domain-containing protein	NA	Q938J4	Temperate_phage	87.6	2.3e-214
WP_000609113.1|981318_981546_-|holin	phage holin	holin	A7J2B3	Streptococcus_phage	98.7	5.8e-31
WP_002987582.1|981542_981818_-	hypothetical protein	NA	A7J2B2	Streptococcus_phage	100.0	2.6e-41
WP_010922094.1|981827_982445_-	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	88.3	1.1e-76
WP_002983467.1|982447_982879_-	DUF1617 family protein	NA	Q938J8	Temperate_phage	89.5	1.3e-63
WP_011054549.1|982890_984774_-	gp58-like family protein	NA	Q938J9	Temperate_phage	97.9	7.5e-249
WP_044557243.1|985799_987944_-|tail	phage tail protein	tail	Q938K1	Temperate_phage	98.2	0.0e+00
WP_011054553.1|987940_988648_-|tail	phage tail family protein	tail	Q938K2	Temperate_phage	69.8	2.4e-91
WP_011054554.1|988647_992571_-|tail	phage tail tape measure protein	tail	J7KDT4	Streptococcus_phage	48.9	4.6e-240
WP_023609816.1|992583_992733_-	hypothetical protein	NA	J7KBS0	Streptococcus_phage	83.7	5.0e-15
WP_011054556.1|992780_993107_-	hypothetical protein	NA	J7KK85	Streptococcus_phage	75.9	1.3e-39
WP_011054557.1|993159_993771_-	hypothetical protein	NA	J7KKC8	Streptococcus_phage	76.2	3.8e-77
WP_011054558.1|993789_994215_-	hypothetical protein	NA	J7KBZ9	Streptococcus_phage	85.1	1.7e-68
WP_011054559.1|994211_994589_-	HK97 gp10 family phage protein	NA	J7KDM3	Streptococcus_phage	75.2	2.5e-47
WP_011054560.1|994585_994924_-|head	phage head closure protein	head	J7KJ42	Streptococcus_phage	80.0	8.1e-45
WP_011054561.1|994920_995223_-|head,tail	phage head-tail connector protein	head,tail	J7KC36	Streptococcus_phage	86.7	1.1e-42
WP_011054563.1|995367_996552_-|capsid	phage major capsid protein	capsid	J7KJ82	Streptococcus_phage	84.5	1.2e-180
WP_011054564.1|996577_997243_-|protease	Clp protease ClpP	protease	M1Q115	Streptococcus_phage	79.0	5.4e-93
WP_011054565.1|997220_998441_-|portal	phage portal protein	portal	J7KDU3	Streptococcus_phage	81.4	1.0e-185
WP_011054566.1|998474_998741_-	hypothetical protein	NA	Q938K9	Temperate_phage	86.4	6.2e-32
WP_011054567.1|998733_998904_-	hypothetical protein	NA	J7KK43	Streptococcus_phage	58.3	3.0e-08
WP_011054568.1|998900_1000655_-	hypothetical protein	NA	J7KKD1	Streptococcus_phage	97.3	0.0e+00
WP_011054569.1|1000669_1001137_-|terminase	phage terminase small subunit P27 family	terminase	J7KC46	Streptococcus_phage	99.4	3.0e-82
WP_002985375.1|1001308_1001647_-	HNH endonuclease	NA	J7KH36	Streptococcus_phage	90.7	3.0e-55
WP_011054571.1|1002232_1002673_-	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	98.6	2.1e-77
WP_011054572.1|1002945_1003581_-	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	68.9	2.2e-88
WP_011054573.1|1003580_1003982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011106747.1|1004571_1004856_-	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	87.2	6.1e-38
WP_011054575.1|1004852_1005056_-	hypothetical protein	NA	A0A1P8VVP9	Streptococcus_phage	100.0	3.1e-07
WP_011054576.1|1005039_1005360_-	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	94.3	7.1e-51
WP_008087509.1|1005356_1005770_-	hypothetical protein	NA	A0A2H4JHE6	uncultured_Caudovirales_phage	50.0	2.8e-15
WP_011106664.1|1007495_1008308_-	bifunctional DNA primase/polymerase	NA	A0A1P8VVM6	Streptococcus_phage	98.9	4.6e-155
WP_011054580.1|1008310_1008769_-	DUF669 domain-containing protein	NA	A0A1P8VVN0	Streptococcus_phage	99.3	5.0e-82
WP_011054581.1|1008784_1010014_-	DEAD/DEAH box helicase family protein	NA	A0A1P8VVM2	Streptococcus_phage	99.0	2.6e-234
WP_002995975.1|1010115_1010796_-	AAA family ATPase	NA	A0A1P8VVS4	Streptococcus_phage	100.0	1.6e-129
WP_011054582.1|1010796_1011279_-	siphovirus Gp157 family protein	NA	A0A1P8VVS5	Streptococcus_phage	98.8	1.0e-77
WP_011054583.1|1011507_1011822_-	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN6	Streptococcus_phage	94.2	2.3e-49
WP_011054584.1|1011968_1012265_-	hypothetical protein	NA	A0A097PAT8	Streptococcus_pyogenes_phage	100.0	2.1e-49
WP_011054585.1|1012342_1012528_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	72.1	3.3e-16
WP_011054586.1|1012694_1012934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984292.1|1013084_1013294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054588.1|1013509_1013749_-	helix-turn-helix transcriptional regulator	NA	A0A097PBE6	Streptococcus_pyogenes_phage	100.0	4.8e-36
WP_011054589.1|1013822_1014209_+	hypothetical protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	100.0	1.2e-65
WP_011054590.1|1014197_1014404_-	hypothetical protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	92.8	1.4e-28
WP_011054591.1|1014460_1015240_+	hypothetical protein	NA	A0A1S5S7L0	Streptococcus_phage	57.4	6.2e-48
WP_011054593.1|1015373_1015520_-	hypothetical protein	NA	A0A097PAP2	Streptococcus_pyogenes_phage	92.3	6.6e-20
WP_011054594.1|1015881_1016670_+	phage repressor protein	NA	A0A1S5SD15	Streptococcus_phage	62.2	3.8e-85
WP_011106738.1|1016679_1016985_+	membrane protein	NA	NA	NA	NA	NA
WP_011054595.1|1017104_1018193_+|integrase	site-specific integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	99.2	4.7e-203
WP_011054596.1|1018555_1019176_+	DUF3862 domain-containing protein	NA	NA	NA	NA	NA
WP_011054597.1|1019432_1021697_-	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.2e-11
1025822:1025837	attR	TCGACAAAGATATCGC	NA	NA	NA	NA
>prophage 6
NC_004070	Streptococcus pyogenes MGAS315, complete sequence	1900521	1134115	1174581	1900521	terminase,integrase,holin,capsid,tail,portal	Streptococcus_phage(71.43%)	57	1137554:1137573	1171954:1171973
WP_011054669.1|1134115_1135051_+	dihydroorotate oxidase	NA	A0A1V0SH91	Hokovirus	45.1	1.0e-65
WP_011054670.1|1135350_1137213_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	33.8	2.7e-89
1137554:1137573	attL	AATTATTTAACAGCGTCTTT	NA	NA	NA	NA
WP_011054671.1|1137742_1137925_-	hypothetical protein	NA	A3F673	Streptococcus_phage	81.7	4.4e-21
WP_002983479.1|1137991_1138786_-	DNA/RNA non-specific endonuclease	NA	A7J2B8	Streptococcus_phage	35.6	8.9e-26
WP_002983477.1|1139030_1140245_-	glucosaminidase domain-containing protein	NA	A0A1P8VVM5	Streptococcus_phage	60.5	9.7e-165
WP_002983475.1|1140356_1140812_-|holin	phage holin family protein	holin	A0A0M4R3G6	Streptococcus_phage	81.5	3.0e-63
WP_011054672.1|1140822_1141437_-	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	79.4	1.8e-66
WP_011054673.1|1141439_1141871_-	DUF1617 family protein	NA	A3F661	Streptococcus_phage	91.4	3.1e-65
WP_011054674.1|1141879_1143661_-	hypothetical protein	NA	Q938J9	Temperate_phage	41.7	4.4e-73
WP_011054675.1|1143675_1144785_-	hyaluronoglucosaminidase	NA	A7J2A8	Streptococcus_phage	65.9	1.2e-113
WP_011054676.1|1144784_1146758_-|tail	phage tail protein	tail	M1PKG3	Streptococcus_phage	49.6	2.0e-98
WP_002992579.1|1146739_1147435_-	hypothetical protein	NA	A0A1B1P761	Bacillus_phage	32.2	4.7e-07
WP_011054677.1|1147431_1149795_-	hypothetical protein	NA	M1NRG5	Streptococcus_phage	50.1	3.6e-131
WP_011054678.1|1149794_1150166_-	DUF5361 domain-containing protein	NA	M1PL84	Streptococcus_phage	62.4	1.7e-35
WP_010922455.1|1150180_1150444_-	hypothetical protein	NA	A0A0B5A2F3	Streptococcus_phage	55.8	1.0e-18
WP_011054679.1|1150454_1151045_-	hypothetical protein	NA	M1PKG8	Streptococcus_phage	62.5	1.1e-60
WP_000573598.1|1151060_1151396_-	hypothetical protein	NA	A0A1P8BMR5	Lactococcus_phage	64.9	9.8e-35
WP_000032787.1|1151396_1151633_-	hypothetical protein	NA	A0A1P8BMT2	Lactococcus_phage	66.7	2.5e-21
WP_011054681.1|1151625_1151964_-	hypothetical protein	NA	A0A0B5A086	Streptococcus_phage	75.0	8.1e-45
WP_011054682.1|1151923_1152346_-	phage Gp19/Gp15/Gp42 family protein	NA	A0A0B5A2F6	Streptococcus_phage	67.2	8.2e-47
WP_010922460.1|1152355_1152556_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054683.1|1152555_1153467_-|capsid	phage major capsid protein	capsid	M1PFL0	Streptococcus_phage	67.0	2.9e-113
WP_011054684.1|1153491_1153953_-	DUF4355 domain-containing protein	NA	M1Q1L0	Streptococcus_phage	52.6	1.7e-37
WP_011054685.1|1154033_1155449_-|terminase	terminase	terminase	A0A0B5A091	Streptococcus_phage	74.0	1.5e-212
WP_011106704.1|1155530_1155746_-	hypothetical protein	NA	M1IRA5	Streptococcus_phage	72.4	4.1e-26
WP_002986828.1|1155747_1156014_-	hypothetical protein	NA	Q938K9	Temperate_phage	95.5	6.4e-37
WP_011054687.1|1156006_1156159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002994100.1|1156235_1156460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010922467.1|1156465_1157959_-	hypothetical protein	NA	M1Q184	Streptococcus_phage	55.0	2.0e-87
WP_011054689.1|1157951_1159220_-|portal	phage portal protein	portal	M1PFL4	Streptococcus_phage	75.6	3.8e-188
WP_002994106.1|1159216_1159573_-	hypothetical protein	NA	M1PRL3	Streptococcus_phage	57.8	2.4e-07
WP_011054690.1|1159720_1160065_-	HNH endonuclease	NA	M1Q0W7	Streptococcus_phage	69.4	3.2e-41
WP_011054691.1|1160172_1160592_-	DUF1492 domain-containing protein	NA	A0A1X9I5B5	Streptococcus_phage	79.1	1.9e-56
WP_011054692.1|1160667_1160919_-	hypothetical protein	NA	M1PF60	Streptococcus_phage	59.0	1.6e-18
WP_011054693.1|1160915_1161071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054694.1|1161067_1161385_-	DUF1372 family protein	NA	A1EAD7	Streptococcus_phage	71.4	9.0e-30
WP_011054695.1|1161420_1161933_-	hypothetical protein	NA	M1PFM2	Streptococcus_phage	85.9	1.7e-78
WP_011054696.1|1161929_1162262_-	hypothetical protein	NA	M1NS23	Streptococcus_phage	66.1	5.7e-35
WP_011054697.1|1162272_1163619_-	PcfJ domain-containing protein	NA	A8ATM0	Listeria_phage	49.4	1.0e-122
WP_011054698.1|1163615_1164011_-	hypothetical protein	NA	A8ATL9	Listeria_phage	52.3	1.4e-19
WP_011054699.1|1164375_1165173_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	J7KGZ1	Streptococcus_phage	83.8	1.3e-130
WP_000594115.1|1165165_1165366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054700.1|1165362_1166289_-	recombinase RecT	NA	M1NRN6	Streptococcus_phage	71.8	1.2e-90
WP_002988357.1|1166677_1166884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002988354.1|1166892_1167033_-	hypothetical protein	NA	A0A1X9I6Y1	Streptococcus_phage	54.5	3.4e-05
WP_010922205.1|1167029_1167263_-	hypothetical protein	NA	Q938N1	Temperate_phage	96.1	2.8e-36
WP_011017564.1|1167243_1167630_-	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	51.9	8.1e-25
WP_010922477.1|1168133_1168319_-	hypothetical protein	NA	Q938N3	Temperate_phage	83.6	1.3e-20
WP_010922478.1|1168320_1168632_-	excisionase	NA	A0A1S5SA25	Streptococcus_phage	77.7	5.3e-43
WP_010922479.1|1168901_1169114_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I583	Streptococcus_phage	56.7	1.1e-10
WP_010922480.1|1169315_1170071_+	helix-turn-helix transcriptional regulator	NA	A0A1S5S8S8	Streptococcus_phage	60.8	2.8e-77
WP_010922481.1|1170082_1170601_+	HIRAN domain-containing protein	NA	E8ZDN5	Streptococcus_phage	45.9	9.2e-32
WP_003051793.1|1170724_1171867_+|integrase	site-specific integrase	integrase	M1NRJ9	Streptococcus_phage	77.4	2.4e-173
WP_002983920.1|1171955_1172231_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.0	2.6e-25
1171954:1171973	attR	AATTATTTAACAGCGTCTTT	NA	NA	NA	NA
WP_002989129.1|1172329_1172917_-	YpmS family protein	NA	NA	NA	NA	NA
WP_002992620.1|1172894_1173737_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_030126969.1|1173729_1174581_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.7	9.2e-13
>prophage 7
NC_004070	Streptococcus pyogenes MGAS315, complete sequence	1900521	1191480	1351250	1900521	terminase,integrase,holin,capsid,tRNA,tail,portal	Temperate_phage(44.0%)	184	1339084:1339099	1353710:1353725
WP_011054710.1|1191480_1194282_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	26.5	1.6e-77
WP_011054711.1|1194554_1195313_-	DivIVA domain-containing protein	NA	NA	NA	NA	NA
WP_002989097.1|1195322_1196114_-	RNA-binding protein	NA	NA	NA	NA	NA
WP_002983869.1|1196113_1196368_-	YggT family protein	NA	NA	NA	NA	NA
WP_011018004.1|1196372_1197029_-	cell division protein SepF	NA	NA	NA	NA	NA
WP_002989094.1|1197040_1197712_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_002983862.1|1197714_1199034_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_002983860.1|1199057_1200422_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_009880396.1|1200632_1201781_-	cell division protein FtsQ/DivIB	NA	NA	NA	NA	NA
WP_032461317.1|1201781_1202864_-	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	NA	NA	NA	NA	NA
WP_011054713.1|1202863_1204222_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_002983849.1|1204577_1204829_-	DUF3165 family protein	NA	NA	NA	NA	NA
WP_002983847.1|1204950_1206792_-	translational GTPase TypA	NA	E4ZFJ7	Streptococcus_phage	31.4	2.0e-20
WP_011054715.1|1206974_1207364_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_009880399.1|1207373_1208345_-	ROK family glucokinase	NA	NA	NA	NA	NA
WP_002983840.1|1208349_1208553_-	YqgQ family protein	NA	NA	NA	NA	NA
WP_011054717.1|1208694_1209222_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
WP_002989076.1|1209449_1210076_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_002992788.1|1210157_1211237_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_011018009.1|1211240_1211885_-	YutD family protein	NA	NA	NA	NA	NA
WP_011054718.1|1212308_1213286_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	25.9	6.2e-21
WP_010922499.1|1213699_1214737_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_002983821.1|1214723_1215215_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	33.8	2.0e-15
WP_002983819.1|1215204_1215744_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_002983817.1|1215866_1216859_-	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	38.5	2.4e-52
WP_003051912.1|1217171_1218122_-	carbamate kinase	NA	NA	NA	NA	NA
WP_011054719.1|1218141_1219473_-	Sapep family Mn(2+)-dependent dipeptidase	NA	NA	NA	NA	NA
WP_002983810.1|1219489_1220983_-	YfcC family protein	NA	NA	NA	NA	NA
WP_002983808.1|1221152_1222166_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_011054720.1|1222205_1222634_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011054721.1|1222733_1223969_-	arginine deiminase	NA	NA	NA	NA	NA
WP_002983795.1|1224244_1224925_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_002989056.1|1225066_1225540_+	arginine repressor	NA	NA	NA	NA	NA
WP_011054722.1|1225706_1226423_-	B3/4 domain-containing protein	NA	NA	NA	NA	NA
WP_011054723.1|1226436_1227516_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_011054724.1|1227588_1229322_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	33.7	1.3e-26
WP_011054725.1|1229318_1230059_-	response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	32.4	8.0e-05
WP_011054726.1|1230303_1230486_-	hypothetical protein	NA	A3F673	Streptococcus_phage	76.7	2.6e-18
WP_011054727.1|1230831_1231407_-	hypothetical protein	NA	Q938J0	Temperate_phage	100.0	1.7e-111
WP_011054728.1|1231882_1232662_-	streptococcal pyrogenic exotoxin SpeK	NA	Q938J1	Temperate_phage	100.0	5.4e-145
WP_011054729.1|1232965_1233832_-	DUF334 domain-containing protein	NA	Q938J2	Temperate_phage	100.0	3.7e-134
WP_011017840.1|1233819_1234344_-	DUF4065 domain-containing protein	NA	Q938J3	Temperate_phage	100.0	4.0e-99
WP_011054730.1|1234483_1235686_-	glucosaminidase domain-containing protein	NA	Q938J4	Temperate_phage	100.0	3.3e-242
WP_011054731.1|1235796_1235982_-	hypothetical protein	NA	Q938J5	Temperate_phage	100.0	1.7e-25
WP_011054732.1|1235978_1236275_-	hypothetical protein	NA	Q938J6	Temperate_phage	100.0	7.5e-47
WP_011054733.1|1236285_1236897_-	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	100.0	2.7e-91
WP_002987513.1|1236899_1237331_-	DUF1617 family protein	NA	Q938J8	Temperate_phage	100.0	1.1e-73
WP_011054734.1|1237342_1239226_-	gp58-like family protein	NA	Q938J9	Temperate_phage	100.0	2.8e-256
WP_011054735.1|1239240_1240254_-	hyaluronoglucosaminidase	NA	Q938K0	Temperate_phage	100.0	1.2e-184
WP_011054736.1|1240250_1242395_-|tail	phage tail protein	tail	Q938K1	Temperate_phage	100.0	0.0e+00
WP_011054737.1|1242391_1243108_-|tail	phage tail family protein	tail	Q938K2	Temperate_phage	100.0	2.9e-137
WP_011054738.1|1243104_1246365_-	tape measure protein	NA	Q938K3	Temperate_phage	99.9	0.0e+00
WP_011054739.1|1246354_1246936_-	bacteriophage Gp15 family protein	NA	Q938K4	Temperate_phage	100.0	1.3e-106
WP_011054740.1|1246939_1247374_-	hypothetical protein	NA	Q938K5	Temperate_phage	100.0	2.6e-72
WP_011054741.1|1247412_1247898_-	hypothetical protein	NA	Q938K6	Temperate_phage	100.0	1.6e-86
WP_010922084.1|1247897_1248296_-|capsid	minor capsid protein	capsid	Q79S87	Temperate_phage	100.0	3.5e-71
WP_010922083.1|1248292_1248649_-|capsid	minor capsid protein	capsid	Q79S88	Temperate_phage	100.0	4.5e-62
WP_010922082.1|1248648_1248981_-|capsid	minor capsid protein	capsid	Q79S86	Temperate_phage	100.0	9.6e-59
WP_011054743.1|1248970_1249387_-	hypothetical protein	NA	Q938K7	Temperate_phage	100.0	1.1e-56
WP_010922080.1|1249440_1250259_-|capsid	N4-gp56 family major capsid protein	capsid	Q79S85	Temperate_phage	100.0	4.0e-146
WP_011106689.1|1250262_1250877_-	hypothetical protein	NA	Q938K8	Temperate_phage	100.0	1.3e-96
WP_011054745.1|1251002_1251269_-	hypothetical protein	NA	Q938K9	Temperate_phage	100.0	1.5e-38
WP_002986829.1|1251330_1251570_-	hypothetical protein	NA	Q938L0	Temperate_phage	100.0	2.8e-36
WP_011054746.1|1251541_1253020_-|capsid	phage minor capsid protein	capsid	Q938L1	Temperate_phage	100.0	8.2e-275
WP_002986832.1|1253024_1254527_-|portal	phage portal protein	portal	Q938L2	Temperate_phage	100.0	5.4e-282
WP_010922074.1|1254540_1255752_-|terminase	PBSX family phage terminase large subunit	terminase	Q938L3	Temperate_phage	99.7	3.7e-225
WP_011054747.1|1255834_1256308_-	hypothetical protein	NA	Q938L4	Temperate_phage	99.4	4.3e-76
WP_002986841.1|1256358_1256736_-	ASCH domain-containing protein	NA	Q938L5	Temperate_phage	100.0	1.7e-67
WP_174132581.1|1256796_1257273_-	GNAT family N-acetyltransferase	NA	B5SP24	Lactococcus_phage	56.9	3.3e-36
WP_002986850.1|1257188_1257866_-	hypothetical protein	NA	Q938L6	Temperate_phage	100.0	8.7e-131
WP_002986854.1|1257844_1258363_-	ParB N-terminal domain-containing protein	NA	Q938L7	Temperate_phage	100.0	1.5e-90
WP_011054748.1|1258443_1258701_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011017866.1|1259339_1259780_-	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	100.0	5.0e-79
WP_164997036.1|1260053_1260224_-	hypothetical protein	NA	A0A097PAS8	Streptococcus_pyogenes_phage	98.2	1.1e-26
WP_011054751.1|1260220_1260727_-	DUF1642 domain-containing protein	NA	Q938L9	Temperate_phage	100.0	9.8e-95
WP_011054752.1|1260723_1260894_-	hypothetical protein	NA	Q938M0	Temperate_phage	100.0	4.2e-26
WP_011054753.1|1260890_1261295_-	hypothetical protein	NA	Q938M1	Temperate_phage	100.0	6.0e-71
WP_011054754.1|1261304_1261574_-	hypothetical protein	NA	Q938M2	Temperate_phage	100.0	4.0e-47
WP_011054755.1|1261570_1261855_-	DUF3310 domain-containing protein	NA	Q938M3	Temperate_phage	100.0	5.4e-50
WP_011054756.1|1261848_1262100_-	hypothetical protein	NA	Q938M4	Temperate_phage	100.0	6.8e-41
WP_011054757.1|1262096_1262453_-	hypothetical protein	NA	A0A1P8VVP9	Streptococcus_phage	85.6	1.6e-51
WP_011054758.1|1262449_1262890_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A097PAS0	Streptococcus_pyogenes_phage	97.3	8.5e-79
WP_011106686.1|1262889_1263093_-	hypothetical protein	NA	Q938M6	Temperate_phage	100.0	4.7e-32
WP_011054759.1|1263098_1263518_-	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	100.0	1.6e-71
WP_011054760.1|1263510_1264185_-	ERF family protein	NA	Q938M8	Temperate_phage	100.0	2.5e-106
WP_011018142.1|1264185_1264668_-	siphovirus Gp157 family protein	NA	Q938M9	Temperate_phage	100.0	8.2e-51
WP_011054761.1|1264689_1264944_-	hypothetical protein	NA	Q938N0	Temperate_phage	100.0	7.4e-43
WP_011284979.1|1264954_1265095_-	hypothetical protein	NA	A0A1X9I6Y1	Streptococcus_phage	52.3	7.5e-05
WP_011054762.1|1265091_1265325_-	hypothetical protein	NA	Q938N1	Temperate_phage	100.0	5.0e-38
WP_011054763.1|1265305_1265719_-	DnaD domain protein	NA	Q938N2	Temperate_phage	100.0	2.1e-63
WP_011106684.1|1265840_1266098_-	hypothetical protein	NA	A0A1S5SFN6	Streptococcus_phage	46.4	1.2e-11
WP_011054765.1|1266191_1266377_-	hypothetical protein	NA	Q938N3	Temperate_phage	100.0	1.1e-24
WP_002988339.1|1266405_1266663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054766.1|1266908_1267163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002986887.1|1267151_1267352_+	KTSC domain-containing protein	NA	A0A1S5S8T9	Streptococcus_phage	72.3	6.3e-21
WP_002986888.1|1267348_1267498_-	hypothetical protein	NA	Q938N4	Temperate_phage	100.0	1.8e-20
WP_011054767.1|1267530_1268259_-	phage antirepressor KilAC domain-containing protein	NA	Q938N5	Temperate_phage	100.0	6.9e-134
WP_002986891.1|1268269_1268461_-	hypothetical protein	NA	A7J270	Streptococcus_phage	90.5	1.2e-24
WP_011054768.1|1269256_1269616_+	helix-turn-helix transcriptional regulator	NA	Q938N6	Temperate_phage	100.0	1.1e-60
WP_002986894.1|1269629_1270010_+	hypothetical protein	NA	Q938N7	Temperate_phage	100.0	5.3e-69
WP_002986895.1|1270020_1270542_+	hypothetical protein	NA	Q938N8	Temperate_phage	100.0	2.3e-67
WP_002986896.1|1270660_1271815_+|integrase	site-specific integrase	integrase	Q938N9	Temperate_phage	100.0	2.8e-206
WP_011054769.1|1271925_1273032_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_011054770.1|1273074_1273698_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_002983776.1|1273710_1274421_-	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	NA	NA	NA	NA	NA
WP_011054771.1|1274641_1275574_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_011054772.1|1275665_1276625_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_011054773.1|1277634_1278414_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054774.1|1278629_1281278_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.1	7.3e-149
WP_002989018.1|1282395_1282791_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054778.1|1282811_1283066_-	DUF1912 family protein	NA	NA	NA	NA	NA
WP_011054779.1|1283544_1284297_+	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA	NA
WP_011054780.1|1284352_1285426_+	3-dehydroquinate synthase	NA	A9YVT7	Ostreococcus_tauri_virus	32.5	1.2e-30
WP_002983743.1|1285861_1286167_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002983741.1|1286168_1286507_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002994868.1|1286559_1287315_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002983735.1|1287567_1288446_-	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_074375317.1|1288583_1292090_-	glycoside hydrolase family 2 protein	NA	NA	NA	NA	NA
WP_009880559.1|1292019_1293504_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011054782.1|1293503_1295228_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	24.4	1.7e-13
WP_011054783.1|1295217_1295823_-	YesL family protein	NA	NA	NA	NA	NA
WP_011054784.1|1296128_1297574_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_011054785.1|1297654_1298581_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004219264.1|1298590_1299541_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_011054786.1|1299736_1300615_+	ROK family protein	NA	NA	NA	NA	NA
WP_011054787.1|1301225_1302668_-	glycoside hydrolase family 1 protein	NA	NA	NA	NA	NA
WP_011054788.1|1302691_1304386_-	beta-N-acetylglucosaminidase	NA	NA	NA	NA	NA
WP_011054789.1|1304436_1305477_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_032459850.1|1305609_1306896_+	glycoside hydrolase family 125 protein	NA	NA	NA	NA	NA
WP_011054791.1|1306910_1309616_+	alpha-mannosidase	NA	NA	NA	NA	NA
WP_011054792.1|1309820_1311071_-	transcriptional regulator RocA	NA	NA	NA	NA	NA
WP_002991789.1|1311735_1313091_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	33.0	1.1e-73
WP_011054793.1|1313281_1313464_-	hypothetical protein	NA	J7KBZ4	Streptococcus_phage	81.4	1.1e-19
WP_011054794.1|1313683_1314439_+	streptococcal pyrogenic exotoxin SpeA	NA	A0A097PAT7	Streptococcus_pyogenes_phage	99.6	2.2e-143
WP_009880240.1|1314560_1315220_-	hypothetical protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	100.0	8.5e-123
WP_009880241.1|1315219_1315441_-	hypothetical protein	NA	A0A097PAX7	Streptococcus_pyogenes_phage	84.5	2.5e-18
WP_011054795.1|1315450_1316224_-	hypothetical protein	NA	A0A097PAV0	Streptococcus_pyogenes_phage	100.0	3.9e-135
WP_011054796.1|1316234_1316837_-	hypothetical protein	NA	A0A097PAX9	Streptococcus_pyogenes_phage	98.8	7.8e-91
WP_011054797.1|1316848_1317613_-	CHAP domain-containing protein	NA	A0A097PAT3	Streptococcus_pyogenes_phage	100.0	1.5e-150
WP_011054798.1|1317614_1317947_-|holin	phage holin	holin	A0A097PBF6	Streptococcus_pyogenes_phage	100.0	5.7e-51
WP_009880247.1|1318418_1318766_-	DUF1366 domain-containing protein	NA	A0A097PAX5	Streptococcus_pyogenes_phage	100.0	3.5e-59
WP_011106671.1|1318776_1320639_-	hypothetical protein	NA	A0A097PAT0	Streptococcus_pyogenes_phage	99.7	0.0e+00
WP_011054801.1|1320643_1324084_-|tail	phage tail protein	tail	A0A097PBF5	Streptococcus_pyogenes_phage	99.9	0.0e+00
WP_009880250.1|1324084_1325569_-|tail	phage tail family protein	tail	A0A097PAW9	Streptococcus_pyogenes_phage	99.8	4.3e-292
WP_011054802.1|1325569_1327375_-|tail	tail protein	tail	A0A097PAU2	Streptococcus_pyogenes_phage	99.7	8.8e-263
WP_009880253.1|1327367_1327826_-	hypothetical protein	NA	A0A097PAX1	Streptococcus_pyogenes_phage	100.0	2.3e-82
WP_009880254.1|1327798_1328116_-	hypothetical protein	NA	A0A097PAS6	Streptococcus_pyogenes_phage	100.0	4.9e-52
WP_009880255.1|1328128_1328635_-|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	100.0	2.6e-79
WP_009880256.1|1328646_1329057_-	DUF5072 family protein	NA	A0A097PAW5	Streptococcus_pyogenes_phage	100.0	1.4e-70
WP_009880257.1|1329058_1329454_-	hypothetical protein	NA	A0A097PAT9	Streptococcus_pyogenes_phage	100.0	1.8e-59
WP_009880258.1|1329450_1329762_-	hypothetical protein	NA	A0A097PAW7	Streptococcus_pyogenes_phage	99.0	2.6e-50
WP_009880259.1|1329758_1330103_-	hypothetical protein	NA	A0A097PAS2	Streptococcus_pyogenes_phage	100.0	1.1e-54
WP_009880260.1|1330116_1330410_-	Rho termination factor N-terminal domain-containing protein	NA	A0A097PBF3	Streptococcus_pyogenes_phage	100.0	2.0e-47
WP_009880261.1|1330422_1331313_-	hypothetical protein	NA	A0A097PAW2	Streptococcus_pyogenes_phage	99.4	8.6e-86
WP_011054804.1|1331330_1331903_-	DUF4355 domain-containing protein	NA	A0A097PAW3	Streptococcus_pyogenes_phage	100.0	1.2e-72
WP_011054805.1|1332052_1332319_-	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	100.0	2.6e-38
WP_009880264.1|1332325_1333234_-|capsid	minor capsid protein	capsid	A0A097PBF2	Streptococcus_pyogenes_phage	100.0	4.2e-88
WP_052833464.1|1333202_1334528_-|portal	phage portal protein	portal	A0A097PAT2	Streptococcus_pyogenes_phage	99.8	1.6e-242
WP_011285571.1|1335791_1336172_-	hypothetical protein	NA	A0A097PAR5	Streptococcus_pyogenes_phage	100.0	1.0e-64
WP_011054810.1|1336781_1337216_-	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	94.4	2.2e-71
WP_002987493.1|1337499_1337670_-	hypothetical protein	NA	A0A097PAS8	Streptococcus_pyogenes_phage	100.0	2.9e-27
WP_011054811.1|1337666_1338170_-	DUF1642 domain-containing protein	NA	A0A097PAV5	Streptococcus_pyogenes_phage	97.6	8.5e-91
WP_011054812.1|1338456_1338642_-	hypothetical protein	NA	A0A097PBF0	Streptococcus_pyogenes_phage	100.0	7.0e-27
WP_011054813.1|1338807_1339143_-	hypothetical protein	NA	A0A097PAS4	Streptococcus_pyogenes_phage	100.0	4.7e-45
1339084:1339099	attL	AAATCCCATTATAAAA	NA	NA	NA	NA
WP_032461310.1|1339145_1339430_-	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	91.5	5.0e-40
WP_011054814.1|1339426_1339597_-	hypothetical protein	NA	Q938M0	Temperate_phage	96.8	2.5e-10
WP_011054815.1|1339593_1340007_-	hypothetical protein	NA	Q938M1	Temperate_phage	63.1	1.2e-34
WP_011018137.1|1340003_1340288_-	DUF3310 domain-containing protein	NA	A0A1P8VVP5	Streptococcus_phage	97.9	2.7e-49
WP_011054816.1|1340529_1340886_-	hypothetical protein	NA	A0A097PAU4	Streptococcus_pyogenes_phage	94.9	1.8e-58
WP_011054817.1|1340869_1341190_-	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	99.1	5.8e-53
WP_011106664.1|1342904_1343717_-	bifunctional DNA primase/polymerase	NA	A0A1P8VVM6	Streptococcus_phage	98.9	4.6e-155
WP_011054580.1|1343719_1344178_-	DUF669 domain-containing protein	NA	A0A1P8VVN0	Streptococcus_phage	99.3	5.0e-82
WP_011054819.1|1344193_1345423_-	DEAD/DEAH box helicase	NA	A0A1P8VVM2	Streptococcus_phage	99.5	2.8e-236
WP_002995975.1|1345524_1346205_-	AAA family ATPase	NA	A0A1P8VVS4	Streptococcus_phage	100.0	1.6e-129
WP_011054820.1|1346205_1346688_-	siphovirus Gp157 family protein	NA	A0A1P8VVS5	Streptococcus_phage	99.4	4.6e-78
WP_011054583.1|1346916_1347231_-	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN6	Streptococcus_phage	94.2	2.3e-49
WP_011054821.1|1347246_1347384_-	hypothetical protein	NA	A0A1P8VVR9	Streptococcus_phage	91.1	9.2e-16
WP_011054822.1|1347414_1347666_-	hypothetical protein	NA	A0A1P8VVV6	Streptococcus_phage	98.8	1.4e-41
WP_009881062.1|1347760_1347979_-	helix-turn-helix transcriptional regulator	NA	A0A1P8VVR5	Streptococcus_phage	100.0	4.1e-34
WP_011054823.1|1348167_1348527_+	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN3	Streptococcus_phage	97.5	4.0e-58
WP_011054824.1|1348510_1348888_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A1P8VVK5	Streptococcus_phage	100.0	4.0e-69
WP_011054825.1|1348898_1349051_+	hypothetical protein	NA	A0A1P8VVQ0	Streptococcus_phage	100.0	5.2e-20
WP_009880743.1|1349319_1349910_+	hypothetical protein	NA	A0A1P8VVT3	Streptococcus_phage	99.0	2.7e-104
WP_009880742.1|1350083_1351250_+|integrase	tyrosine-type recombinase/integrase	integrase	C5J953	Streptococcus_phage	42.2	7.0e-80
1353710:1353725	attR	TTTTATAATGGGATTT	NA	NA	NA	NA
>prophage 8
NC_004070	Streptococcus pyogenes MGAS315, complete sequence	1900521	1373172	1452968	1900521	terminase,integrase,head,holin,capsid,tRNA,tail,portal	Streptococcus_phage(68.97%)	83	1399525:1399540	1455690:1455705
WP_011054834.1|1373172_1374108_-|tRNA	methionyl-tRNA formyltransferase	tRNA	M4QRX9	Synechococcus_phage	38.5	6.0e-05
WP_011054835.1|1374169_1376554_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_002983650.1|1376618_1376936_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002983649.1|1376951_1377587_-	guanylate kinase	NA	S4VT50	Pandoravirus	45.3	4.9e-11
WP_002988954.1|1377696_1379304_-	ribonuclease Y	NA	NA	NA	NA	NA
WP_011054836.1|1379433_1380330_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	22.3	2.5e-08
WP_003061463.1|1380528_1381716_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_160399639.1|1381757_1382390_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_011054838.1|1382391_1383051_+	3-oxoacid CoA-transferase subunit B	NA	NA	NA	NA	NA
WP_011054841.1|1383933_1385265_+	GntP family permease	NA	NA	NA	NA	NA
WP_002988938.1|1385338_1385821_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_011054842.1|1385965_1387435_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002988932.1|1387448_1388603_-	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_002983626.1|1389047_1389374_-	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_002994217.1|1389492_1390008_-	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_002983622.1|1390088_1390697_+	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	33.9	3.2e-23
WP_011054843.1|1390683_1392849_+	penicillin-binding protein	NA	NA	NA	NA	NA
WP_011054844.1|1393315_1394653_-	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	37.0	1.4e-68
WP_011054845.1|1394837_1395662_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	57.1	1.5e-71
WP_011054846.1|1395658_1397119_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	42.0	1.1e-98
WP_002988920.1|1397288_1398668_-	amino acid permease	NA	NA	NA	NA	NA
WP_011054847.1|1398836_1399754_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.2	1.6e-90
1399525:1399540	attL	CCATAAATGTTTTCAA	NA	NA	NA	NA
WP_002994231.1|1399817_1400042_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_011054848.1|1400145_1400889_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.2	1.0e-28
WP_011054849.1|1400888_1401692_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_011054850.1|1401886_1403230_-	DEAD/DEAH box helicase	NA	A0A1V0SBR7	Catovirus	28.1	3.9e-42
WP_011054851.1|1403387_1404398_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_011106648.1|1404399_1406655_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_002988895.1|1406658_1406982_-	cell division protein FtsL	NA	NA	NA	NA	NA
WP_002983586.1|1406986_1408000_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_002994245.1|1408023_1408188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159316501.1|1408289_1408451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054854.1|1408470_1409721_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	55.6	2.2e-116
WP_011054855.1|1409713_1410535_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	36.8	4.7e-38
WP_011054856.1|1410724_1410907_-	hypothetical protein	NA	A3F673	Streptococcus_phage	83.3	1.5e-21
WP_048901986.1|1411139_1412126_+	DNA/RNA non-specific endonuclease	NA	A7J2B8	Streptococcus_phage	99.7	9.0e-169
WP_011054858.1|1412440_1412815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003058873.1|1414394_1414622_-|holin	phage holin	holin	A7J2B3	Streptococcus_phage	100.0	2.0e-31
WP_002986916.1|1414618_1414891_-	hypothetical protein	NA	A7J2B2	Streptococcus_phage	91.0	7.2e-36
WP_011054861.1|1414900_1415518_-	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	86.8	9.5e-76
WP_011054862.1|1415514_1415952_-	DUF1617 family protein	NA	Q938J8	Temperate_phage	97.2	1.0e-71
WP_011054863.1|1415963_1417979_-	gp58-like family protein	NA	Q938J9	Temperate_phage	73.2	1.6e-185
WP_011054441.1|1417988_1418996_-	hyaluronoglucosaminidase	NA	Q938K0	Temperate_phage	61.4	4.6e-104
WP_011054864.1|1418992_1420972_-|tail	phage tail protein	tail	A7J2A7	Streptococcus_phage	92.5	0.0e+00
WP_011054865.1|1420981_1421824_-	hypothetical protein	NA	A7J2A6	Streptococcus_phage	97.9	8.8e-157
WP_011054866.1|1421835_1426218_-	tape measure protein	NA	A7J2A5	Streptococcus_phage	75.9	3.3e-223
WP_011054867.1|1426232_1426466_-	hypothetical protein	NA	A7J2A4	Streptococcus_phage	97.4	6.4e-33
WP_011054868.1|1426540_1426996_-	hypothetical protein	NA	A7J2A3	Streptococcus_phage	98.0	3.5e-75
WP_011054869.1|1427049_1427649_-|tail	phage major tail protein, TP901-1 family	tail	A7J2A2	Streptococcus_phage	97.1	1.7e-90
WP_011054870.1|1427660_1428020_-	hypothetical protein	NA	A7J2A1	Streptococcus_phage	98.3	1.2e-57
WP_011106640.1|1428023_1428368_-	HK97 gp10 family phage protein	NA	A7J2A0	Streptococcus_phage	98.2	5.1e-55
WP_011054872.1|1428364_1428643_-	hypothetical protein	NA	A7J299	Streptococcus_phage	100.0	1.9e-47
WP_011054873.1|1428653_1429010_-|head,tail	phage head-tail connector protein	head,tail	A7J298	Streptococcus_phage	100.0	4.6e-59
WP_002983429.1|1429021_1429909_-	hypothetical protein	NA	A7J297	Streptococcus_phage	100.0	2.1e-161
WP_011054874.1|1429921_1430491_-	DUF4355 domain-containing protein	NA	A7J296	Streptococcus_phage	99.5	7.4e-83
WP_011054875.1|1430658_1430925_-	hypothetical protein	NA	Q938K9	Temperate_phage	95.5	1.1e-36
WP_011054876.1|1430929_1431118_-	hypothetical protein	NA	A7J294	Streptococcus_phage	100.0	7.4e-24
WP_011054877.1|1431145_1432594_-|capsid	minor capsid protein	capsid	A7J293	Streptococcus_phage	99.6	1.3e-277
WP_011106638.1|1432553_1434086_-|portal	phage portal protein	portal	A7J292	Streptococcus_phage	99.6	9.9e-292
WP_011054879.1|1434101_1435379_-|terminase	PBSX family phage terminase large subunit	terminase	A7J291	Streptococcus_phage	100.0	1.1e-246
WP_011106637.1|1435368_1435821_-|terminase	terminase small subunit	terminase	A7J290	Streptococcus_phage	100.0	6.9e-76
WP_011054881.1|1435910_1436327_-	transcriptional regulator	NA	A7J289	Streptococcus_phage	99.3	3.3e-72
WP_011054882.1|1436459_1436732_-	hypothetical protein	NA	A7J287	Streptococcus_phage	73.3	5.7e-25
WP_011054883.1|1436724_1436895_-	hypothetical protein	NA	A7J285	Streptococcus_phage	94.2	3.1e-21
WP_011054884.1|1436895_1438218_-	DEAD/DEAH box helicase family protein	NA	A7J284	Streptococcus_phage	97.3	7.3e-251
WP_011054885.1|1438214_1438490_-	VRR-NUC domain-containing protein	NA	A7J283	Streptococcus_phage	96.7	2.9e-45
WP_011054886.1|1438855_1441240_-	DNA primase	NA	A7J282	Streptococcus_phage	98.0	5.7e-286
WP_011054887.1|1441244_1443167_-	DNA polymerase	NA	A7J280	Streptococcus_phage	98.3	0.0e+00
WP_011054888.1|1443209_1443773_-	DUF2815 family protein	NA	D2J040	Enterococcus_phage	57.9	5.6e-51
WP_011054889.1|1443786_1444944_-	DUF2800 domain-containing protein	NA	A7J278	Streptococcus_phage	99.2	8.5e-219
WP_000573833.1|1444943_1445243_-	hypothetical protein	NA	A7J277	Streptococcus_phage	99.0	2.3e-43
WP_011054890.1|1445330_1445534_-	hypothetical protein	NA	A7J276	Streptococcus_phage	94.0	1.2e-30
WP_011054892.1|1445679_1446063_-	hypothetical protein	NA	A7J274	Streptococcus_phage	93.7	5.9e-60
WP_011054894.1|1446259_1446430_-	hypothetical protein	NA	A7J273	Streptococcus_phage	92.9	9.0e-21
WP_011054895.1|1446458_1446716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054896.1|1446803_1447034_-	hypothetical protein	NA	A7J271	Streptococcus_phage	92.0	3.4e-31
WP_001283052.1|1447054_1447246_-	hypothetical protein	NA	A7J270	Streptococcus_phage	100.0	7.3e-27
WP_011184049.1|1447884_1448235_+	helix-turn-helix transcriptional regulator	NA	M1I9X0	Streptococcus_phage	85.3	1.2e-48
WP_011054898.1|1448248_1448632_+	hypothetical protein	NA	A7J268	Streptococcus_phage	99.2	1.5e-68
WP_011054899.1|1448642_1449194_+	hypothetical protein	NA	A7J267	Streptococcus_phage	94.0	1.5e-88
WP_011054900.1|1449369_1450458_+|integrase	site-specific integrase	integrase	Q938N9	Temperate_phage	72.6	6.4e-152
WP_011054901.1|1450600_1452229_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011054902.1|1452233_1452968_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.7	2.2e-26
1455690:1455705	attR	CCATAAATGTTTTCAA	NA	NA	NA	NA
