assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000006825.1_ASM682v1	NC_002663	Pasteurella multocida subsp. multocida str. Pm70, complete sequence	1	362647-364594	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	Type I-F	GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA	28,28,28	0	0	NA	NA	NA:NA:NA	32,32,32	32	TypeI-F	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA,NA|197aa|down_3|NC_002663.1_371099_371690_+	NA|172aa|up_9|NC_002663.1_348682_349198_+	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ	NA|964aa|up_8|NC_002663.1_349239_352131_+	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|90aa|up_7|NC_002663.1_352298_352568_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|371aa|up_6|NC_002663.1_352705_353818_-	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|683aa|up_5|NC_002663.1_353999_356048_+	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|720aa|up_4|NC_002663.1_356181_358341_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	cas8f|445aa|up_3|NC_002663.1_358605_359940_+	cd09675, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|328aa|up_2|NC_002663.1_359949_360933_+	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	cas7f|336aa|up_1|NC_002663.1_360935_361943_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|187aa|up_0|NC_002663.1_361945_362506_+	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	cas1|327aa|down_0|NC_002663.1_364763_365744_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1107aa|down_1|NC_002663.1_365724_369045_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	NA|619aa|down_2|NC_002663.1_369102_370959_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|197aa|down_3|NC_002663.1_371099_371690_+	NA	NA|268aa|down_4|NC_002663.1_371753_372557_-	PRK10757, PRK10757, inositol-1-monophosphatase	NA|239aa|down_5|NC_002663.1_372770_373487_+	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|155aa|down_6|NC_002663.1_373565_374030_+	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|405aa|down_7|NC_002663.1_374077_375292_+	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|129aa|down_8|NC_002663.1_375523_375910_+	PRK11325, PRK11325, scaffold protein; Provisional	NA|108aa|down_9|NC_002663.1_375979_376303_+	TIGR02011, Protein_yfhF
GCF_000006825.1_ASM682v1	NC_002663	Pasteurella multocida subsp. multocida str. Pm70, complete sequence	2	1322127-1322492	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas9	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	Type II-B, or Type II-C?,Type II-A, Type II-B,Type II-C	GTTGTAGTTCCCTCTCTCATTTCGCAGTGCTACAAT,GTTGTAGTTCCCTCTCTCATTTCGCAGTGCTACAAT,GTTGTAGTTCCCTCTCTCATTTCGCAGTGCTACAAT	36,36,36	0	0	NA	NA	NA:NA:NA	5,5,5	5	TypeII-B,orTypeII-C?,TypeII-A,TypeII-B,TypeII-C	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA|67aa|up_2|NC_002663.1_1320623_1320824_-,NA	NA|715aa|up_9|NC_002663.1_1309781_1311926_-	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|481aa|up_8|NC_002663.1_1312374_1313817_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|263aa|up_7|NC_002663.1_1314569_1315358_+	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane]	NA|383aa|up_6|NC_002663.1_1315442_1316591_-	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|336aa|up_5|NC_002663.1_1316698_1317706_+	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|258aa|up_4|NC_002663.1_1317706_1318480_+	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|458aa|up_3|NC_002663.1_1318495_1319869_+	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|67aa|up_2|NC_002663.1_1320623_1320824_-	NA	NA|108aa|up_1|NC_002663.1_1321009_1321333_-	pfam12441, CopG_antitoxin, CopG antitoxin of type II toxin-antitoxin system	NA|95aa|up_0|NC_002663.1_1321397_1321682_-	pfam14076, DUF4258, Domain of unknown function (DUF4258)	cas2|109aa|down_0|NC_002663.1_1322725_1323052_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|305aa|down_1|NC_002663.1_1323044_1323959_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1057aa|down_2|NC_002663.1_1324014_1327185_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|98aa|down_3|NC_002663.1_1327409_1327703_-	pfam17347, DUF5377, Family of unknown function (DUF5377)	NA|94aa|down_4|NC_002663.1_1327707_1327989_-	COG3036, COG3036, Uncharacterized protein conserved in bacteria [Function unknown]	NA|117aa|down_5|NC_002663.1_1328061_1328412_-	TIGR00014, Putative_arsenate_reductase	NA|355aa|down_6|NC_002663.1_1328491_1329556_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|1033aa|down_7|NC_002663.1_1329613_1332712_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|148aa|down_8|NC_002663.1_1332721_1333165_-	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|404aa|down_9|NC_002663.1_1333192_1334404_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit
GCF_000006825.1_ASM682v1	NC_002663	Pasteurella multocida subsp. multocida str. Pm70, complete sequence	3	2080625-2082755	3,3,3,4	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas3	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	Unclear	GTTAACTGCCGTATAGGCAGCTTAGAAA,GTTAACTGCCGTATAGGCAGCTTAGAAA,GTTAACTGCCGTATAGGCAGCTTAGAAA,GTTAACTGCCGTATAGGCAGCTTAGAAA	28,28,28,28	0	0	NA	NA	I-F:I-F:I-F:I-F	35,35,30,30	35	Unclear	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA,NA	NA|373aa|up_9|NC_002663.1_2069223_2070342_-	pfam03702, AnmK, Anhydro-N-acetylmuramic acid kinase	NA|223aa|up_8|NC_002663.1_2070483_2071152_-	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|456aa|up_7|NC_002663.1_2071192_2072560_-	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|143aa|up_6|NC_002663.1_2072583_2073012_-	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|190aa|up_5|NC_002663.1_2073017_2073587_-	pfam04220, YihI, Der GTPase activator (YihI)	NA|220aa|up_4|NC_002663.1_2073650_2074310_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|968aa|up_3|NC_002663.1_2074390_2077294_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|235aa|up_2|NC_002663.1_2077571_2078276_+	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|238aa|up_1|NC_002663.1_2078323_2079037_-	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	cas3|443aa|up_0|NC_002663.1_2079148_2080477_+	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|322aa|down_0|NC_002663.1_2083017_2083983_-	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	NA|349aa|down_1|NC_002663.1_2083979_2085026_-	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|137aa|down_2|NC_002663.1_2085091_2085502_-	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|475aa|down_3|NC_002663.1_2085617_2087042_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|340aa|down_4|NC_002663.1_2087270_2088290_-	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|481aa|down_5|NC_002663.1_2088315_2089758_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|309aa|down_6|NC_002663.1_2089795_2090722_-	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|204aa|down_7|NC_002663.1_2090907_2091519_+	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|456aa|down_8|NC_002663.1_2091546_2092914_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|529aa|down_9|NC_002663.1_2093272_2094859_+	COG1620, LldP, L-lactate permease [Energy production and conversion]
GCF_000006825.1_ASM682v1	NC_002663	Pasteurella multocida subsp. multocida str. Pm70, complete sequence	4	2082879-2082966	4	CRISPRCasFinder	no	cas3	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	Unclear	GTTAACTGCCGTATAGGCAGCTTAGAAA	28	0	0	NA	NA	I-F	1	1	Unclear	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA,NA	NA|373aa|up_9|NC_002663.1_2069223_2070342_-	pfam03702, AnmK, Anhydro-N-acetylmuramic acid kinase	NA|223aa|up_8|NC_002663.1_2070483_2071152_-	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|456aa|up_7|NC_002663.1_2071192_2072560_-	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|143aa|up_6|NC_002663.1_2072583_2073012_-	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|190aa|up_5|NC_002663.1_2073017_2073587_-	pfam04220, YihI, Der GTPase activator (YihI)	NA|220aa|up_4|NC_002663.1_2073650_2074310_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|968aa|up_3|NC_002663.1_2074390_2077294_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|235aa|up_2|NC_002663.1_2077571_2078276_+	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|238aa|up_1|NC_002663.1_2078323_2079037_-	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	cas3|443aa|up_0|NC_002663.1_2079148_2080477_+	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|322aa|down_0|NC_002663.1_2083017_2083983_-	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	NA|349aa|down_1|NC_002663.1_2083979_2085026_-	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|137aa|down_2|NC_002663.1_2085091_2085502_-	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|475aa|down_3|NC_002663.1_2085617_2087042_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|340aa|down_4|NC_002663.1_2087270_2088290_-	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|481aa|down_5|NC_002663.1_2088315_2089758_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|309aa|down_6|NC_002663.1_2089795_2090722_-	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|204aa|down_7|NC_002663.1_2090907_2091519_+	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|456aa|down_8|NC_002663.1_2091546_2092914_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|529aa|down_9|NC_002663.1_2093272_2094859_+	COG1620, LldP, L-lactate permease [Energy production and conversion]
