The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_002737	Streptococcus pyogenes M1 GAS, complete sequence	1852433	36220	48533	1852433		Synechococcus_phage(28.57%)	8	NA	NA
WP_015055883.1|36220_39946_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.3	1.5e-38
WP_010921773.1|40106_41561_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	2.8e-54
WP_010921774.1|41588_42611_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.1	1.1e-63
WP_010921775.1|42778_43333_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	5.2e-25
WP_011285343.1|43516_45064_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	51.3	8.3e-44
WP_010921776.1|45121_46246_-	SH3 domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_010921777.1|46498_47764_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_002987716.1|48041_48533_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.2e-18
>prophage 2
NC_002737	Streptococcus pyogenes M1 GAS, complete sequence	1852433	336405	342439	1852433		Streptococcus_phage(100.0%)	9	NA	NA
WP_010921930.1|336405_337041_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	1.2e-65
WP_010921931.1|337058_337934_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	43.8	7.7e-63
WP_010921932.1|337952_338192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002985838.1|338596_338920_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_010921933.1|338924_339788_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
WP_002985833.1|339814_340207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010921934.1|340253_340883_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_011284536.1|341181_341538_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
WP_010921936.1|341611_342439_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.1	1.4e-127
>prophage 3
NC_002737	Streptococcus pyogenes M1 GAS, complete sequence	1852433	445173	451824	1852433	portal	Streptococcus_phage(66.67%)	13	NA	NA
WP_002985621.1|445173_445383_-	helix-turn-helix domain-containing protein	NA	A0A2K5B263	Erysipelothrix_phage	61.5	1.3e-16
WP_010921999.1|445372_446218_-	DUF2326 domain-containing protein	NA	NA	NA	NA	NA
WP_010922000.1|446302_447031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010922001.1|447021_447246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160338849.1|447245_448139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015055928.1|448154_448331_+	prophage LambdaSa04	NA	M1PSF2	Streptococcus_phage	86.2	3.2e-21
WP_002991611.1|448385_448688_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_011285435.1|448687_448993_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_010922005.1|449011_449284_+	hypothetical protein	NA	E4ZFM1	Streptococcus_phage	48.1	1.2e-06
WP_010922006.1|449388_449841_+|portal	phage portal protein	portal	E4ZFM3	Streptococcus_phage	84.9	4.4e-62
WP_011285436.1|449906_450221_+	hypothetical protein	NA	Q6DMT0	Streptococcus_phage	64.5	4.9e-20
WP_011285437.1|450637_450976_+	Fic family protein	NA	NA	NA	NA	NA
WP_010922009.1|450999_451824_+	asparagine ligase A	NA	M1PB22	Moumouvirus	33.1	6.2e-22
>prophage 4
NC_002737	Streptococcus pyogenes M1 GAS, complete sequence	1852433	514895	627603	1852433	tRNA,holin,terminase,capsid,tail,portal,protease	Temperate_phage(37.29%)	102	NA	NA
WP_015055933.1|514895_516020_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_101485534.1|516088_517186_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_002985455.1|517205_517898_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	35.6	1.0e-30
WP_002990498.1|517890_518820_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010922050.1|519129_519828_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	62.4	1.1e-77
WP_010922051.1|520867_523369_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	48.1	1.3e-203
WP_002985439.1|523703_524897_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002985437.1|524917_526264_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.8	1.1e-55
WP_002985434.1|526677_527568_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	8.8e-06
WP_002985431.1|527564_528542_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	74.2	2.1e-138
WP_002985428.1|528538_529450_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	64.7	1.3e-105
WP_010922052.1|529626_531042_-	recombinase family protein	NA	A5GZ62	Lactococcus_phage	47.0	2.3e-109
WP_010922053.1|531162_531528_-	hypothetical protein	NA	Q9T1Z1	Lactococcus_phage	67.2	2.8e-19
WP_010922054.1|531554_532316_-	helix-turn-helix transcriptional regulator	NA	X2KUB8	Streptococcus_phage	40.2	1.4e-39
WP_010922055.1|532499_532730_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	63.2	2.3e-19
WP_010922056.1|532798_532936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922058.1|533059_533287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922059.1|533286_534606_+	AAA family ATPase	NA	A0A097BY67	Enterococcus_phage	63.6	1.1e-150
WP_010922060.1|534620_535712_+	ATP-binding protein	NA	A0A0K2CZH1	Paenibacillus_phage	52.0	1.0e-96
WP_010922061.1|535751_536174_+	hypothetical protein	NA	M1I9V9	Streptococcus_phage	59.9	4.2e-35
WP_010922062.1|536175_536910_+	hypothetical protein	NA	Q0R597	Streptococcus_phage	60.9	3.9e-76
WP_010922063.1|536931_537567_+	hypothetical protein	NA	A0A097BY29	Enterococcus_phage	46.7	4.3e-31
WP_010922064.1|537566_539150_+	DEAD/DEAH box helicase family protein	NA	A0A097BY72	Enterococcus_phage	77.4	1.3e-233
WP_010922065.1|539159_539789_+	hypothetical protein	NA	A0A2R4P8H7	Staphylococcus_phage	43.1	9.1e-42
WP_010922066.1|539778_542052_+	AAA family ATPase	NA	Q5YA88	Bacillus_phage	64.2	3.8e-279
WP_010922067.1|542329_542548_+	hypothetical protein	NA	A0A1S5SEA6	Streptococcus_phage	64.3	1.3e-16
WP_010922068.1|542540_542936_+	RusA family crossover junction endodeoxyribonuclease	NA	Q5YA86	Bacillus_phage	65.6	9.4e-45
WP_010922069.1|542932_543154_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011527915.1|543156_543429_+	hypothetical protein	NA	A7J287	Streptococcus_phage	62.2	1.0e-18
WP_010922070.1|543430_544066_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	69.4	2.0e-89
WP_010922071.1|544338_544773_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	95.8	4.5e-72
WP_010922072.1|545082_546249_+	ParB N-terminal domain-containing protein	NA	Q708N6	Streptococcus_phage	53.6	2.3e-123
WP_010922073.1|546591_547068_+	hypothetical protein	NA	Q938L4	Temperate_phage	68.4	4.9e-48
WP_010922074.1|547150_548362_+|terminase	PBSX family phage terminase large subunit	terminase	Q938L3	Temperate_phage	99.7	3.7e-225
WP_010922075.1|548375_549878_+|portal	phage portal protein	portal	Q938L2	Temperate_phage	99.6	5.9e-281
WP_010922076.1|549882_551376_+|capsid	phage minor capsid protein	capsid	Q938L1	Temperate_phage	80.8	2.1e-214
WP_010922077.1|551375_551603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922078.1|551689_551956_+	hypothetical protein	NA	Q938K9	Temperate_phage	95.5	8.3e-37
WP_010922079.1|552081_552696_+	hypothetical protein	NA	Q938K8	Temperate_phage	95.0	3.1e-95
WP_010922080.1|552699_553518_+|capsid	N4-gp56 family major capsid protein	capsid	Q79S85	Temperate_phage	100.0	4.0e-146
WP_010922081.1|553571_553988_+	hypothetical protein	NA	Q938K7	Temperate_phage	99.1	4.3e-56
WP_010922082.1|553977_554310_+|capsid	minor capsid protein	capsid	Q79S86	Temperate_phage	100.0	9.6e-59
WP_010922083.1|554309_554666_+|capsid	minor capsid protein	capsid	Q79S88	Temperate_phage	100.0	4.5e-62
WP_010922084.1|554662_555061_+|capsid	minor capsid protein	capsid	Q79S87	Temperate_phage	100.0	3.5e-71
WP_011527917.1|555060_555531_+|tail	major tail shaft protein	tail	Q938K6	Temperate_phage	100.0	8.0e-83
WP_010922086.1|555583_556018_+	hypothetical protein	NA	Q938K5	Temperate_phage	99.3	2.9e-71
WP_010922087.1|556021_556603_+	bacteriophage Gp15 family protein	NA	Q938K4	Temperate_phage	98.4	1.6e-104
WP_010922088.1|556592_559853_+	tape measure protein	NA	Q938K3	Temperate_phage	98.5	0.0e+00
WP_010922089.1|559849_560566_+|tail	phage tail family protein	tail	Q938K2	Temperate_phage	99.2	1.9e-136
WP_010922090.1|560562_562707_+|tail	phage tail protein	tail	Q938K1	Temperate_phage	97.5	0.0e+00
WP_010922091.1|562703_563717_+	hyaluronoglucosaminidase	NA	Q938K0	Temperate_phage	99.7	2.0e-184
WP_010922092.1|563731_565618_+	gp58-like family protein	NA	Q938J9	Temperate_phage	84.4	3.8e-216
WP_010922093.1|565629_566061_+	DUF1617 family protein	NA	Q938J8	Temperate_phage	91.6	6.9e-65
WP_010922094.1|566063_566681_+	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	88.3	1.1e-76
WP_002987582.1|566690_566966_+	hypothetical protein	NA	A7J2B2	Streptococcus_phage	100.0	2.6e-41
WP_000609113.1|566962_567190_+|holin	phage holin	holin	A7J2B3	Streptococcus_phage	98.7	5.8e-31
WP_010922095.1|567305_568508_+	glucosaminidase domain-containing protein	NA	Q938J4	Temperate_phage	95.8	1.8e-232
WP_002988478.1|568575_569283_-	streptococcal pyrogenic exotoxin SpeC	NA	A0A097PAT7	Streptococcus_pyogenes_phage	27.5	1.4e-09
WP_002985324.1|569393_570152_-	DNase Mf2	NA	NA	NA	NA	NA
WP_010922096.1|570463_571882_+	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_029714003.1|572033_573581_+	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA	NA
WP_010922098.1|573728_574451_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010922099.1|574469_575669_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002985307.1|575765_576026_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_010922100.1|576140_577082_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_002985303.1|577475_577925_+	flavodoxin	NA	NA	NA	NA	NA
WP_010922101.1|578100_578385_+	chorismate mutase	NA	NA	NA	NA	NA
WP_011285464.1|578377_579640_+	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	50.5	8.4e-95
WP_002985298.1|579754_580102_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_011285465.1|581104_581674_+	hydrolase	NA	NA	NA	NA	NA
WP_010922104.1|581674_583627_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	46.3	1.5e-143
WP_010922105.1|583994_585719_+	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
WP_002990451.1|585850_586309_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	39.1	1.8e-18
WP_002985288.1|586535_587843_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	96.6	1.2e-240
WP_164926141.1|591632_597812_+	DUF1542 domain-containing protein	NA	NA	NA	NA	NA
WP_002985285.1|598676_598838_+	TOMM family cytolysin streptolysin S	NA	NA	NA	NA	NA
WP_010922108.1|599059_600010_+	streptolysin S biosynthesis dehydrogenase SagB	NA	NA	NA	NA	NA
WP_010922109.1|600006_601065_+	streptolysin associated protein SagC	NA	NA	NA	NA	NA
WP_002990434.1|601084_602443_+	YcaO-like family protein	NA	NA	NA	NA	NA
WP_002985272.1|602417_603089_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010922110.1|603085_603769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002990429.1|603791_604715_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	38.1	6.7e-33
WP_010922111.1|604723_605851_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010922112.1|605847_606966_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010922113.1|607536_610269_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_010922114.1|610546_611047_+	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	31.8	5.4e-05
WP_010922115.1|611240_613199_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	34.6	4.5e-103
WP_010922116.1|613212_614235_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	27.9	3.6e-19
WP_002985249.1|614627_614825_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_003050130.1|614859_615576_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_010922117.1|615593_616088_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_010922118.1|616087_616624_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_002985238.1|616639_618148_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_002985236.1|618163_619039_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010922119.1|619200_620607_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003050138.1|620619_621036_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_002994426.1|621301_621559_+	DUF1146 domain-containing protein	NA	NA	NA	NA	NA
WP_002994428.1|621623_622895_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010922120.1|622898_623087_+	DNA-directed RNA polymerase subunit beta	NA	NA	NA	NA	NA
WP_011285471.1|623122_623662_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_003061661.1|623944_624988_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	34.3	2.7e-30
WP_010922122.1|625197_627603_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
>prophage 5
NC_002737	Streptococcus pyogenes M1 GAS, complete sequence	1852433	663011	673614	1852433		Streptococcus_phage(57.14%)	9	NA	NA
WP_010922138.1|663011_665222_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	69.1	2.9e-268
WP_002985142.1|665329_666493_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
WP_002985140.1|666489_667176_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_010922139.1|667269_668436_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	34.4	1.8e-38
WP_010922140.1|668496_668838_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	5.9e-19
WP_010922141.1|669058_670411_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.0	4.5e-30
WP_002990257.1|670498_671767_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_010922142.1|671796_672237_-	membrane protein	NA	NA	NA	NA	NA
WP_011285480.1|672471_673614_+	cysteine desulfurase	NA	H7BUW1	unidentified_phage	31.7	7.8e-15
>prophage 6
NC_002737	Streptococcus pyogenes M1 GAS, complete sequence	1852433	764215	819857	1852433	head,tRNA,terminase,capsid,tail,integrase	Streptococcus_phage(40.74%)	73	778519:778569	820954:821004
WP_010922190.1|764215_765115_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010922191.1|765187_766426_+	GTPase HflX	NA	NA	NA	NA	NA
WP_002990114.1|766418_767054_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_002984894.1|767068_767998_+	ribonuclease Z	NA	NA	NA	NA	NA
WP_002984893.1|767997_768762_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002990110.1|768758_770969_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.2	3.9e-71
WP_002990109.1|771119_771638_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	42.4	3.9e-30
WP_010922192.1|771718_772402_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	36.8	2.9e-09
WP_010922193.1|772398_773055_+	endonuclease III	NA	NA	NA	NA	NA
WP_002990104.1|773126_773813_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_002984887.1|773802_774591_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_029713989.1|774630_775737_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010922195.1|775794_776664_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	64.2	3.2e-101
WP_002990099.1|776663_777257_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	28.2	3.7e-08
WP_010922196.1|777500_778541_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	43.9	1.1e-68
778519:778569	attL	AAACTCAAGAAGTGATTAAATAAAACATTAAAGAACCTTGTCATATCAACG	NA	NA	NA	NA
WP_011888953.1|778634_779774_-|integrase	site-specific integrase	integrase	A1EAB7	Streptococcus_phage	56.3	1.2e-119
WP_010922198.1|780027_780837_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	J7KDP1	Streptococcus_phage	35.8	2.2e-24
WP_010922199.1|780849_781596_-	helix-turn-helix domain-containing protein	NA	A0A1X9I5R4	Streptococcus_phage	63.2	9.7e-83
WP_010922200.1|781785_781944_+	hypothetical protein	NA	A0A097PAP2	Streptococcus_pyogenes_phage	86.5	8.4e-21
WP_010922201.1|782122_782962_-	DUF4393 domain-containing protein	NA	A0A0R6PH66	Moraxella_phage	29.6	3.7e-22
WP_002988305.1|783079_783307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001157159.1|783380_783587_+	helix-turn-helix domain-containing protein	NA	A0A1X9I5S3	Streptococcus_phage	64.7	1.1e-17
WP_010922203.1|783626_784355_+	phage antirepressor KilAC domain-containing protein	NA	Q938N5	Temperate_phage	83.1	1.1e-112
WP_010922204.1|784386_784653_+	hypothetical protein	NA	A0A1S5SC19	Streptococcus_phage	66.3	1.1e-23
WP_002990083.1|784587_785394_-	TIGR02391 family protein	NA	A0A1S5SBU1	Streptococcus_phage	81.7	2.3e-122
WP_002990081.1|785535_785772_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078237815.1|785925_786222_+	excisionase	NA	A0A1S5SA25	Streptococcus_phage	76.3	8.9e-40
WP_002990078.1|786223_786409_+	hypothetical protein	NA	Q938N3	Temperate_phage	90.2	1.2e-21
WP_002990076.1|786891_787278_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	47.3	1.1e-24
WP_010922205.1|787258_787492_+	hypothetical protein	NA	Q938N1	Temperate_phage	96.1	2.8e-36
WP_002988354.1|787488_787629_+	hypothetical protein	NA	A0A1X9I6Y1	Streptococcus_phage	54.5	3.4e-05
WP_010922206.1|787637_787844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922207.1|787899_788229_+	hypothetical protein	NA	J7KGX3	Streptococcus_phage	82.6	3.5e-45
WP_002990071.1|788231_789023_+	phage recombination protein Bet	NA	A0A1S5SFP4	Streptococcus_phage	82.0	1.4e-119
WP_002990067.1|790256_790595_+	hypothetical protein	NA	M1PKX3	Streptococcus_phage	37.5	4.0e-12
WP_010922210.1|790591_791104_+	hypothetical protein	NA	Q708P9	Streptococcus_phage	73.8	3.4e-63
WP_002990061.1|791090_791285_+	hypothetical protein	NA	A3F626	Streptococcus_phage	86.5	9.7e-11
WP_002990058.1|791281_791527_+	hypothetical protein	NA	A0A1P8VVL2	Streptococcus_phage	92.5	4.5e-21
WP_002990055.1|791578_792040_+	DUF1642 domain-containing protein	NA	A0A097PAV5	Streptococcus_pyogenes_phage	60.1	4.5e-46
WP_002987493.1|792036_792207_+	hypothetical protein	NA	A0A097PAS8	Streptococcus_pyogenes_phage	100.0	2.9e-27
WP_002990052.1|792489_792930_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	98.6	4.2e-78
WP_002990050.1|793244_794159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002990048.1|794248_794461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002990047.1|794666_795149_+|terminase	terminase small subunit	terminase	E0Y3R8	Staphylococcus_virus	40.3	3.3e-15
WP_002988380.1|795126_796416_+|terminase	PBSX family phage terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	74.9	1.5e-184
WP_010922212.1|797910_799536_+|head	phage head morphogenesis protein	head	U6E9F1	Streptococcus_phage	44.3	1.3e-47
WP_010922213.1|799526_799706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922214.1|799765_800035_+	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	81.8	1.1e-33
WP_162467708.1|800130_800295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984380.1|800423_800672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922216.1|800673_801420_+	phage antirepressor KilAC domain-containing protein	NA	M1PKL6	Streptococcus_phage	56.7	5.3e-73
WP_010922217.1|801531_802065_+	DUF4355 domain-containing protein	NA	A0A141E0S7	Streptococcus_phage	84.2	4.7e-15
WP_002990036.1|802074_802455_+	structural protein	NA	A0A0K2CNR0	Brevibacillus_phage	36.3	6.4e-06
WP_010922218.1|802457_803507_+|capsid	major capsid protein	capsid	B0YL60	Streptococcus_virus	57.1	5.1e-106
WP_002990031.1|803518_803785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922219.1|803796_804150_+|head,tail	phage head-tail connector protein	head,tail	A0A2H4J002	uncultured_Caudovirales_phage	49.6	7.4e-25
WP_002990028.1|804146_804455_+	hypothetical protein	NA	A0A2P1JTW8	Anoxybacillus_phage	40.2	5.7e-13
WP_002984399.1|804435_804801_+	HK97 gp10 family phage protein	NA	A0A097BY98	Enterococcus_phage	46.3	7.7e-17
WP_010922220.1|804797_805187_+	hypothetical protein	NA	Q38611	Lactococcus_phage	68.2	1.0e-43
WP_002990025.1|805196_805850_+|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	53.3	6.6e-43
WP_002990023.1|805909_806263_+|tail	tail assembly chaperone	tail	Q77RZ7	Lactococcus_phage	48.6	5.5e-20
WP_002988428.1|806304_806634_+	hypothetical protein	NA	A0A1P8BLR3	Lactococcus_phage	40.6	5.7e-11
WP_010922222.1|806648_810284_+	tape measure protein	NA	U6E979	Streptococcus_phage	28.0	4.0e-04
WP_010922223.1|810316_811096_+|tail	phage tail family protein	tail	A3F655	Streptococcus_phage	54.4	3.9e-66
WP_010922224.1|811092_813141_+|tail	phage tail protein	tail	A3F656	Streptococcus_phage	85.3	0.0e+00
WP_010922225.1|813140_814259_+	hyaluronoglucosaminidase	NA	A7J2A8	Streptococcus_phage	71.6	3.4e-124
WP_010922226.1|814271_816182_+	gp58-like family protein	NA	Q938J9	Temperate_phage	71.0	5.7e-119
WP_002987333.1|816195_816357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002990014.1|816359_816971_+	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	91.1	5.7e-81
WP_002990012.1|816981_817278_+	hypothetical protein	NA	Q938J6	Temperate_phage	98.0	3.7e-46
WP_078237818.1|817274_817460_+	hypothetical protein	NA	Q938J5	Temperate_phage	93.4	1.2e-23
WP_010922227.1|817571_818906_+	lysin	NA	Q5MY96	Streptococcus_phage	92.8	2.9e-247
WP_047373492.1|819179_819857_+	streptococcal pyrogenic exotoxin SpeI	NA	A0A075M4C7	Staphylococcus_phage	32.4	2.4e-27
820954:821004	attR	AAACTCAAGAAGTGATTAAATAAAACATTAAAGAACCTTGTCATATCAACG	NA	NA	NA	NA
>prophage 7
NC_002737	Streptococcus pyogenes M1 GAS, complete sequence	1852433	1148028	1225257	1852433	holin,tRNA,capsid,tail,terminase,portal,integrase,protease	Streptococcus_phage(63.64%)	89	1189120:1189139	1222630:1222649
WP_011285602.1|1148028_1148724_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010922423.1|1148742_1149504_-	DUF3169 family protein	NA	NA	NA	NA	NA
WP_002989220.1|1149500_1149716_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010922424.1|1150076_1152695_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.1	1.8e-62
WP_002984003.1|1153081_1154137_-	peptidylprolyl isomerase PrsA	NA	NA	NA	NA	NA
WP_002989211.1|1154199_1154907_-	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	27.2	2.6e-08
WP_002995765.1|1154972_1156169_-	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_010922425.1|1156544_1158350_-	oligoendopeptidase F	NA	NA	NA	NA	NA
WP_010922426.1|1158362_1159325_-	transcription factor	NA	NA	NA	NA	NA
WP_010922428.1|1160453_1161158_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_010922429.1|1161359_1162388_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010922430.1|1162394_1163615_+	DUF3114 domain-containing protein	NA	NA	NA	NA	NA
WP_010922431.1|1163728_1164319_-	serine hydrolase	NA	NA	NA	NA	NA
WP_010922432.1|1164315_1164564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010922433.1|1164548_1164776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010922434.1|1164942_1165548_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	53.2	5.1e-58
WP_010922435.1|1165644_1166685_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_010922436.1|1166755_1168999_-	DNA internalization-related competence protein ComEC/Rec2	NA	M1PSD2	Streptococcus_phage	58.7	9.8e-54
WP_002983967.1|1168979_1169642_-	ComEA family DNA-binding protein	NA	NA	NA	NA	NA
WP_011285604.1|1169841_1170582_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010922438.1|1170699_1171476_+|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_002989164.1|1171465_1171744_+	GIY-YIG nuclease family protein	NA	W8W2G4	Invertebrate_iridovirus	36.0	1.8e-05
WP_010922439.1|1171767_1173768_-	potassium transporter Kup	NA	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	34.0	7.6e-66
WP_002989158.1|1173895_1175515_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.5	1.9e-59
WP_002989155.1|1175821_1177366_-	peptide chain release factor 3	NA	A0A1B0RXH7	Streptococcus_phage	29.1	1.1e-35
WP_029714299.1|1177613_1178309_-	TIGR02206 family membrane protein	NA	NA	NA	NA	NA
WP_010922441.1|1178388_1179780_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_002989146.1|1179970_1181017_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_002983939.1|1181117_1181714_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_002989141.1|1182512_1183292_-	formate/nitrite transporter family protein	NA	NA	NA	NA	NA
WP_002989140.1|1183415_1183958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002983930.1|1184118_1184640_-	transcription repressor NadR	NA	NA	NA	NA	NA
WP_002983928.1|1184746_1185442_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_010922443.1|1185680_1186616_+	dihydroorotate oxidase	NA	A0A1V0SH91	Hokovirus	44.8	1.3e-65
WP_010922444.1|1186915_1188778_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	33.7	6.0e-89
1189120:1189139	attL	AATTATTTAACAGCGTCTTT	NA	NA	NA	NA
WP_011017964.1|1189308_1189491_-	hypothetical protein	NA	A3F673	Streptococcus_phage	76.7	1.4e-19
WP_011285611.1|1189728_1190529_+	streptodornase Sda3	NA	NA	NA	NA	NA
WP_011017966.1|1190799_1191234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922446.1|1191303_1192509_-	glucosaminidase domain-containing protein	NA	Q938J4	Temperate_phage	84.3	5.9e-207
WP_003058873.1|1192624_1192852_-|holin	phage holin	holin	A7J2B3	Streptococcus_phage	100.0	2.0e-31
WP_002987582.1|1192848_1193124_-	hypothetical protein	NA	A7J2B2	Streptococcus_phage	100.0	2.6e-41
WP_010922447.1|1193133_1193751_-	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	88.8	1.0e-77
WP_010922448.1|1193753_1194185_-	DUF1617 family protein	NA	Q938J8	Temperate_phage	97.9	3.8e-71
WP_010922449.1|1194196_1195981_-	hypothetical protein	NA	Q938J9	Temperate_phage	47.5	6.3e-96
WP_010922450.1|1195995_1197108_-	hyaluronoglucosaminidase	NA	Q938K0	Temperate_phage	60.5	1.5e-111
WP_010922451.1|1197107_1199066_-|tail	phage tail protein	tail	M1PKG3	Streptococcus_phage	49.2	5.3e-96
WP_010922452.1|1199062_1199758_-	hypothetical protein	NA	A0A1B1P761	Bacillus_phage	29.6	7.6e-05
WP_010922453.1|1199754_1202112_-	hypothetical protein	NA	M1NRG5	Streptococcus_phage	50.6	6.5e-141
WP_010922454.1|1202111_1202483_-	DUF5361 domain-containing protein	NA	M1PL84	Streptococcus_phage	62.4	2.9e-35
WP_010922455.1|1202497_1202761_-	hypothetical protein	NA	A0A0B5A2F3	Streptococcus_phage	55.8	1.0e-18
WP_010922456.1|1202771_1203365_-|tail	tail protein	tail	M1PKG8	Streptococcus_phage	62.5	3.5e-59
WP_000573598.1|1203376_1203712_-	hypothetical protein	NA	A0A1P8BMR5	Lactococcus_phage	64.9	9.8e-35
WP_010922457.1|1203712_1203949_-	hypothetical protein	NA	A0A0B5A7G2	Streptococcus_phage	71.4	2.5e-21
WP_011285617.1|1203941_1204280_-	hypothetical protein	NA	M1PFF8	Streptococcus_phage	70.3	2.2e-42
WP_010922459.1|1204239_1204662_-	phage Gp19/Gp15/Gp42 family protein	NA	A0A0B5A2F6	Streptococcus_phage	70.8	3.7e-47
WP_010922460.1|1204671_1204872_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010922461.1|1204871_1205783_-|capsid	phage major capsid protein	capsid	M1PFL0	Streptococcus_phage	67.3	9.9e-114
WP_010922462.1|1205807_1206269_-	DUF4355 domain-containing protein	NA	M1Q1L0	Streptococcus_phage	53.2	4.5e-38
WP_011285619.1|1206349_1207765_-|terminase	terminase	terminase	A0A0B5A091	Streptococcus_phage	74.2	2.9e-213
WP_010922464.1|1207874_1208141_-	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	86.4	7.3e-33
WP_015055972.1|1208133_1208313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010922466.1|1208362_1208587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010922467.1|1208592_1210086_-	hypothetical protein	NA	M1Q184	Streptococcus_phage	55.0	2.0e-87
WP_010922468.1|1210078_1211347_-|portal	phage portal protein	portal	M1PFL4	Streptococcus_phage	75.6	2.2e-188
WP_002994106.1|1211343_1211700_-	hypothetical protein	NA	M1PRL3	Streptococcus_phage	57.8	2.4e-07
WP_010922469.1|1211848_1212193_-	HNH endonuclease	NA	M1Q0W7	Streptococcus_phage	68.5	5.5e-41
WP_010922470.1|1212301_1212721_-	DUF1492 domain-containing protein	NA	A0A1X9I5B5	Streptococcus_phage	79.9	8.7e-57
WP_010922070.1|1212988_1213624_-	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	69.4	2.0e-89
WP_002988369.1|1213625_1213895_-	hypothetical protein	NA	A7J287	Streptococcus_phage	71.9	9.6e-25
WP_002988366.1|1213978_1214491_-	hypothetical protein	NA	Q708P9	Streptococcus_phage	78.0	2.3e-67
WP_030127594.1|1214487_1214829_-	hypothetical protein	NA	M1NS23	Streptococcus_phage	39.6	1.4e-12
WP_010922472.1|1215005_1215803_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	J7KGZ1	Streptococcus_phage	82.3	7.6e-126
WP_010922473.1|1215795_1215996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010922474.1|1215992_1216982_-	recombinase RecT	NA	A0A286QMX3	Streptococcus_phage	44.2	5.8e-59
WP_010922475.1|1216981_1217314_-	hypothetical protein	NA	J7KGX3	Streptococcus_phage	78.7	2.2e-42
WP_010922476.1|1217369_1217576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002988354.1|1217584_1217725_-	hypothetical protein	NA	A0A1X9I6Y1	Streptococcus_phage	54.5	3.4e-05
WP_010922205.1|1217721_1217955_-	hypothetical protein	NA	Q938N1	Temperate_phage	96.1	2.8e-36
WP_002990076.1|1217935_1218322_-	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	47.3	1.1e-24
WP_010922477.1|1218810_1218996_-	hypothetical protein	NA	Q938N3	Temperate_phage	83.6	1.3e-20
WP_010922478.1|1218997_1219309_-	excisionase	NA	A0A1S5SA25	Streptococcus_phage	77.7	5.3e-43
WP_010922479.1|1219578_1219791_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I583	Streptococcus_phage	56.7	1.1e-10
WP_010922480.1|1219992_1220748_+	helix-turn-helix transcriptional regulator	NA	A0A1S5S8S8	Streptococcus_phage	60.8	2.8e-77
WP_010922481.1|1220759_1221278_+	HIRAN domain-containing protein	NA	E8ZDN5	Streptococcus_phage	45.9	9.2e-32
WP_003051793.1|1221401_1222544_+|integrase	site-specific integrase	integrase	M1NRJ9	Streptococcus_phage	77.4	2.4e-173
WP_002983920.1|1222631_1222907_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.0	2.6e-25
1222630:1222649	attR	AATTATTTAACAGCGTCTTT	NA	NA	NA	NA
WP_010922482.1|1223005_1223593_-	YpmS family protein	NA	NA	NA	NA	NA
WP_002992620.1|1223570_1224413_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_002983913.1|1224405_1225257_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.7	5.4e-13
>prophage 8
NC_002737	Streptococcus pyogenes M1 GAS, complete sequence	1852433	1771371	1789567	1852433	integrase,holin	Streptococcus_phage(53.33%)	22	1773339:1773359	1786868:1786888
WP_010922757.1|1771371_1773354_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.0	5.1e-62
1773339:1773359	attL	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
WP_014635780.1|1773448_1774600_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	44.9	7.9e-84
WP_011185066.1|1774848_1774992_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_003058809.1|1775852_1776620_-	helix-turn-helix domain-containing protein	NA	Q76TK4	Streptococcus_pyogenes_phage	83.1	3.6e-72
WP_002992503.1|1776773_1776980_+	helix-turn-helix transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	2.4e-07
WP_010922759.1|1777013_1777781_+	Bro-N domain-containing protein	NA	A0A0A7S0G2	Clostridium_phage	53.7	5.0e-26
WP_010922760.1|1777790_1778414_+	phage repressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	43.3	2.5e-39
WP_014635782.1|1778440_1778683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922762.1|1778938_1779280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922763.1|1779266_1779488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922764.1|1779490_1779682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922765.1|1779693_1780023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922766.1|1780025_1780298_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	3.6e-19
WP_010922767.1|1780298_1781156_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	74.8	4.5e-124
WP_002992487.1|1781124_1782813_+	DNA primase	NA	A0A1X9I717	Streptococcus_phage	82.1	2.5e-259
WP_000694577.1|1783099_1783273_+	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
WP_014635784.1|1783278_1783452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014407945.1|1783453_1783963_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.1e-29
WP_010922769.1|1784036_1784525_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	54.3	6.8e-45
WP_010922770.1|1784928_1785291_+	DUF1492 domain-containing protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	30.8	3.5e-06
WP_010922771.1|1785265_1785649_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	42.1	3.7e-14
WP_010922773.1|1787011_1789567_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	23.1	2.0e-42
1786868:1786888	attR	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
