bac_id	spacer_id	hit_phage_id	hit_phage_def	spacer_sequence	hit_phage_region	hit_phage_sequence	mismatch	coverage	hmm_mismatch
NC_004088	2.3|1291630|33|NC_004088|PILER-CR,CRISPRCasFinder,CRT	NZ_CP040366	Bacillus flexus isolate 1-2-1 plasmid punnamed3, complete sequence	CCGAAATCATCAGATGTAATTAAGATTTTTGCT	923-955	GGAAAAAAACTTAATTACATCTGATAATCCATT	2	0.7575757575757576	9
NC_004088	2.4|1291691|32|NC_004088|CRISPRCasFinder,CRT	MT374852	Yersinia phage vB_YpM_3, complete genome	AGACTGATGCAAGATGGCGGTATGCGTACAGA	12-43	AGACTGATGCAAGATGGCGGTATGCGTACAGA	0	1.0	0
NC_004088	3.1|1902358|30|NC_004088|CRISPRCasFinder	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAA	166773-166802	CTTGTTCAGTGGCATTTTCTTTGGCACAGA	1	0.7	7
NC_004088	3.2|1902418|30|NC_004088|CRISPRCasFinder	NZ_CP031943	Nostoc sphaeroides strain Kutzing En plasmid p2, complete sequence	ACTACTAGAAGCTTGCCCATCTTACCTTTT	4007-4036	ACCACTAAAAGCTTGCCCATCTTTCTCATA	2	0.7666666666666667	7
NC_004088	3.2|1902418|30|NC_004088|CRISPRCasFinder	AP014500	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C79, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces	ACTACTAGAAGCTTGCCCATCTTACCTTTT	26487-26516	ATTACTAGAAGCTTGCACATCTTCTACAAC	1	0.7	9
NC_004088	3.3|1902478|30|NC_004088|CRISPRCasFinder	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	TCATGAAAGACATTGTTCGCCAGTCCCCTG	2177-2206	TCATGAAAGACATTGTGCGCCAGTCACCCG	2	0.9333333333333333	3
NC_004088	3.3|1902478|30|NC_004088|CRISPRCasFinder	CP049262	Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence	TCATGAAAGACATTGTTCGCCAGTCCCCTG	69637-69666	TCATGAAAGAGATTGTTCGCCAGCGCGACG	1	0.7666666666666667	6
NC_004088	3.3|1902478|30|NC_004088|CRISPRCasFinder	NZ_CP041669	Legionella israelensis strain L18-01051 plasmid unnamed, complete sequence	TCATGAAAGACATTGTTCGCCAGTCCCCTG	43412-43441	TCATGAAAGACATTGTTCGACAAAAAACAC	1	0.7333333333333333	8
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	MF679145	Escherichia coli plasmid pBJ114-96, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	37586-37614	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	60831-60859	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP021340	Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	67671-67699	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP021336	Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	67672-67700	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP040920	Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	33438-33466	ACAGTTAAAGAAACTGCCAATCAGATAAT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP024832	Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	33830-33858	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP024817	Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	62769-62797	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	TGCGCCAAAGAAAATGCCATTCAGATAAT	15616-15644	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	TGCGCCAAAGAAAATGCCATTCAGATAAT	112580-112608	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP023961	Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	16858-16886	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	AP023222	Escherichia coli M505 plasmid pM505-b DNA, complete genome	TGCGCCAAAGAAAATGCCATTCAGATAAT	93737-93765	ACAGTTAAAGAAACTGCCAATCAGATAAT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	AP023233	Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome	TGCGCCAAAGAAAATGCCATTCAGATAAT	47570-47598	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP019075	Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	16520-16548	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	3287-3315	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NZ_CP011063	Escherichia coli str. Sanji plasmid pSJ_98, complete sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	37637-37665	ATTATCTGATTGGCAGTTTCTTTAACTGT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	JF974294	Aeromonas phage pIS4-A genomic sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	21968-21996	AGGCATAAAGCAAATGCCATTCAGGTAAT	2	0.7931034482758621	7
NC_004088	3.4|1902360|29|NC_004088|PILER-CR	NC_021534	Vibrio phage pYD38-A genomic sequence	TGCGCCAAAGAAAATGCCATTCAGATAAT	3299-3327	ATTACCTGAATGGCATTTGCTTTATGCCT	2	0.7931034482758621	7
NC_004088	3.5|1902420|29|NC_004088|PILER-CR	AP014500	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C79, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces	TACTAGAAGCTTGCCCATCTTACCTTTTC	26489-26517	TACTAGAAGCTTGCACATCTTCTACAACC	1	0.7241379310344828	8
NC_004088	3.6|1902358|31|NC_004088|CRT	MF679145	Escherichia coli plasmid pBJ114-96, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	37586-37616	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	60831-60861	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP021340	Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	67671-67701	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP021336	Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	67672-67702	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP024832	Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	33830-33860	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP024817	Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	62769-62799	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	15616-15646	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	112580-112610	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP023961	Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	16858-16888	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	AP023233	Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	47570-47600	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP019075	Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	16520-16550	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	3287-3317	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP011063	Escherichia coli str. Sanji plasmid pSJ_98, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	37637-37667	ATTATCTGATTGGCAGTTTCTTTAACTGTTT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	NC_021534	Vibrio phage pYD38-A genomic sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	3299-3329	ATTACCTGAATGGCATTTGCTTTATGCCTGA	2	0.7419354838709677	7
NC_004088	3.6|1902358|31|NC_004088|CRT	NZ_CP040920	Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	33436-33466	AAACAGTTAAAGAAACTGCCAATCAGATAAT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	AP023222	Escherichia coli M505 plasmid pM505-b DNA, complete genome	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	93735-93765	AAACAGTTAAAGAAACTGCCAATCAGATAAT	2	0.7419354838709677	9
NC_004088	3.6|1902358|31|NC_004088|CRT	JF974294	Aeromonas phage pIS4-A genomic sequence	TCTGCGCCAAAGAAAATGCCATTCAGATAAT	21966-21996	TCAGGCATAAAGCAAATGCCATTCAGGTAAT	2	0.7419354838709677	7
NC_004088	3.7|1902418|31|NC_004088|CRT	NZ_CP031943	Nostoc sphaeroides strain Kutzing En plasmid p2, complete sequence	ACTACTAGAAGCTTGCCCATCTTACCTTTTC	4007-4037	ACCACTAAAAGCTTGCCCATCTTTCTCATAA	2	0.7419354838709677	8
NC_004088	3.8|1902478|31|NC_004088|CRT	CP049262	Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence	TCATGAAAGACATTGTTCGCCAGTCCCCTGA	69637-69667	TCATGAAAGAGATTGTTCGCCAGCGCGACGT	1	0.7419354838709677	7
NC_004088	4.2|2875809|32|NC_004088|CRISPRCasFinder,CRT	NZ_CP010358	Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence	TTAAGTTCTTTTTGTCAGCATCTTTAATAAAT	46720-46751	ATTTATTAATGATGCTGACGAAAATATGGCAC	2	0.75	8
NC_004088	4.2|2875809|32|NC_004088|CRISPRCasFinder,CRT	MT774386	CrAssphage cr110_1, complete genome	TTAAGTTCTTTTTGTCAGCATCTTTAATAAAT	42858-42889	TGCTATTGAAGATGCTGATAAAAAGAAACTTG	2	0.75	9
NC_004088	4.2|2875809|32|NC_004088|CRISPRCasFinder,CRT	MH616963	CrAssphage sp. isolate ctbg_1, complete genome	TTAAGTTCTTTTTGTCAGCATCTTTAATAAAT	86942-86973	TAATAATCTTTTTATCAGCATCTTTTATAATT	2	0.75	7
NC_004088	4.2|2875809|32|NC_004088|CRISPRCasFinder,CRT	NC_019694	Oscillatoria acuminata PCC 6304 plasmid pOSCIL6304.02, complete sequence	TTAAGTTCTTTTTGTCAGCATCTTTAATAAAT	20911-20942	ATTTATTAAAGAAGCTGCCAAAAGAGCATCAA	2	0.71875	8
NC_004088	4.2|2875809|32|NC_004088|CRISPRCasFinder,CRT	NZ_CP028934	Campylobacter jejuni strain FORC_083 plasmid pFORC_083_2, complete sequence	TTAAGTTCTTTTTGTCAGCATCTTTAATAAAT	25849-25880	TAACTTTCTTTTTGTCAGCGTCTGTAATGTGC	2	0.71875	9
NC_004088	4.4|2875813|28|NC_004088|PILER-CR	MH616963	CrAssphage sp. isolate ctbg_1, complete genome	AAGTTCTTTTTGTCAGCATCTTTAATAA	86944-86971	ATAATCTTTTTATCAGCATCTTTTATAA	2	0.8571428571428571	5
NC_004088	4.4|2875813|28|NC_004088|PILER-CR	MT774386	CrAssphage cr110_1, complete genome	AAGTTCTTTTTGTCAGCATCTTTAATAA	42860-42887	CTATTGAAGATGCTGATAAAAAGAAACT	2	0.8571428571428571	5
NC_004088	4.4|2875813|28|NC_004088|PILER-CR	NZ_CP028934	Campylobacter jejuni strain FORC_083 plasmid pFORC_083_2, complete sequence	AAGTTCTTTTTGTCAGCATCTTTAATAA	25851-25878	ACTTTCTTTTTGTCAGCGTCTGTAATGT	2	0.8214285714285714	6
NC_004088	4.4|2875813|28|NC_004088|PILER-CR	MK415408	CrAssphage GF1-2_000079F, complete genome	AAGTTCTTTTTGTCAGCATCTTTAATAA	71106-71133	ATAAGACTTTTATCAGCATCTTTAATAA	1	0.75	7
