The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	143870	197973	4600755	transposase,protease,holin,tail	uncultured_Mediterranean_phage(18.18%)	50	NA	NA
WP_002216203.1|143870_144386_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	55.6	3.6e-28
WP_002210135.1|144391_145033_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_002230558.1|145212_145410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002210133.1|145406_145799_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_002210132.1|145813_146242_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_002210131.1|146555_147683_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_002210130.1|147906_148311_+	DUF1043 family protein	NA	NA	NA	NA	NA
WP_002218066.1|148581_149955_+|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.2	7.4e-20
WP_002213775.1|150071_150530_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002210128.1|150755_151844_+	outer membrane-stress sensor serine endopeptidase DegS	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	31.8	2.1e-09
WP_002210127.1|152024_153287_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_002210126.1|153440_153695_-	BolA family iron metabolism protein IbaG	NA	NA	NA	NA	NA
WP_002210125.1|153841_154144_-	lipid asymmetry maintenance protein MlaB	NA	NA	NA	NA	NA
WP_002210124.1|154179_154803_-	phospholipid-binding protein MlaC	NA	NA	NA	NA	NA
WP_002210123.1|154815_155373_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
WP_002210122.1|155377_156160_-	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA	NA
WP_002210121.1|156377_157196_-	phospholipid ABC transporter ATP-binding protein MlaF	NA	G3M9Y6	Bacillus_virus	31.7	2.2e-19
WP_002210120.1|157460_158435_+	calcium/sodium antiporter	NA	NA	NA	NA	NA
WP_002210119.1|158545_159532_+	arabinose-5-phosphate isomerase KdsD	NA	A0A2P0VNK5	Tetraselmis_virus	30.8	6.0e-40
WP_002228203.1|159780_160344_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	83.0	9.6e-59
WP_002218352.1|160340_160904_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_002210117.1|160887_161433_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA	NA
WP_002210116.1|161439_162165_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	1.4e-22
WP_002210115.1|162226_163660_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_002213952.1|164088_164571_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
WP_002210113.1|164876_165731_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	30.0	3.2e-05
WP_002210112.1|165727_166000_+	PTS phosphocarrier protein NPr	NA	NA	NA	NA	NA
WP_002210111.1|166337_167273_+	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	38.5	1.5e-48
WP_002210110.1|167284_167749_+	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_002210109.1|167886_168273_+	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
WP_002210107.1|168571_169048_+	PliI family lysozyme inhibitor of I-type lysozyme	NA	NA	NA	NA	NA
WP_002210106.1|169281_170235_+	HTH-type transcriptional regulator TreR	NA	NA	NA	NA	NA
WP_002215779.1|170645_172061_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_002210104.1|172155_173823_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
WP_002210103.1|174175_174586_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA	NA
WP_002210102.1|174817_175204_-	cytochrome b562	NA	NA	NA	NA	NA
WP_011055205.1|175411_176056_-	hypothetical protein	NA	A0A1B0VBK8	Salmonella_phage	49.0	3.4e-52
WP_002210100.1|176304_177645_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_002210099.1|177825_178374_+	ribosome-associated protein	NA	NA	NA	NA	NA
WP_002210098.1|178485_178767_-	ribonuclease inhibitor	NA	NA	NA	NA	NA
WP_002214288.1|178771_179245_-	ribonuclease Ba	NA	NA	NA	NA	NA
WP_002210095.1|181174_183130_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
WP_002210094.1|183131_184067_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
WP_002210093.1|184074_184278_-	AaeX family protein	NA	NA	NA	NA	NA
WP_002210092.1|184580_185492_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA	NA
WP_002214297.1|185752_186619_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002210090.1|186854_189356_+	toxin	NA	NA	NA	NA	NA
WP_002220204.1|189396_192990_+|tail	phage tail tape measure protein	tail	NA	NA	NA	NA
WP_002210089.1|193046_197537_+	toxin	NA	NA	NA	NA	NA
WP_002214300.1|197670_197973_+|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 2
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	507057	574426	4600755	transposase	Escherichia_phage(35.29%)	49	NA	NA
WP_000255944.1|507057_508080_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|508079_508859_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002211540.1|508897_509233_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_002211541.1|509247_510270_+	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_002211542.1|510379_510868_-	transcription/translation regulatory transformer protein RfaH	NA	NA	NA	NA	NA
WP_002215917.1|511115_512612_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_002215918.1|512666_513368_+	NAD(P)H-flavin reductase	NA	NA	NA	NA	NA
WP_002211545.1|513527_514691_-	acetyl-CoA C-acyltransferase FadA	NA	NA	NA	NA	NA
WP_002211546.1|514702_516892_-	fatty acid oxidation complex subunit alpha FadB	NA	NA	NA	NA	NA
WP_002211547.1|517218_518550_+	Xaa-Pro dipeptidase	NA	NA	NA	NA	NA
WP_002211548.1|518549_518759_+	YigZ family protein	NA	NA	NA	NA	NA
WP_002213759.1|518863_519322_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002211550.1|519910_521362_+	Trk system potassium transporter TrkH	NA	NA	NA	NA	NA
WP_002215920.1|521383_521917_+	menaquinone-dependent protoporphyrinogen IX dehydrogenase	NA	NA	NA	NA	NA
WP_002212288.1|528053_529091_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_002212289.1|529087_530047_+	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA	NA	NA	NA	NA
WP_002212290.1|530081_531032_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	31.2	8.7e-28
WP_002355327.1|531242_531701_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255944.1|531883_532906_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|532905_533685_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002210669.1|534741_535926_+	elongation factor Tu	NA	A0A2K9L516	Tupanvirus	26.9	2.0e-13
WP_002210670.1|536176_536560_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_002210671.1|536561_537107_+	transcription termination/antitermination protein NusG	NA	A0A291AUS6	Sinorhizobium_phage	28.3	5.9e-13
WP_002210672.1|537297_537726_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_002210673.1|537729_538434_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002210674.1|538798_539296_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_002210675.1|539362_539731_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_002210676.1|540073_544102_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	29.0	1.2e-22
WP_002210677.1|544230_548451_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	27.0	8.5e-67
WP_002213759.1|548577_549036_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002210678.1|549467_550598_-	2-iminoacetate synthase ThiH	NA	NA	NA	NA	NA
WP_002228257.1|550590_551406_-	thiazole synthase	NA	NA	NA	NA	NA
WP_002217275.1|551407_551623_-	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_002210680.1|551619_552417_-	HesA/MoeB/ThiF family protein	NA	A0A1V0SAV8	Catovirus	27.8	1.6e-11
WP_002210681.1|552406_553081_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_002210682.1|553067_555113_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_002210683.1|555488_555998_-	sigma D regulator	NA	NA	NA	NA	NA
WP_002210684.1|556094_556877_+	NAD(+) diphosphatase	NA	NA	NA	NA	NA
WP_002210685.1|556969_557755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002210686.1|557873_558941_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_002210687.1|558970_559711_+	deoxyribonuclease V	NA	NA	NA	NA	NA
WP_002210688.1|559756_560347_+	YjaG family protein	NA	NA	NA	NA	NA
WP_002210689.1|560535_560811_+	DNA-binding protein HU-alpha	NA	A7KV42	Bacillus_phage	55.6	3.6e-19
WP_002355296.1|560860_561514_+	DUF1481 domain-containing protein	NA	NA	NA	NA	NA
WP_002210691.1|561661_562948_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_002210692.1|563007_564597_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	49.4	2.2e-68
WP_086016626.1|570860_571959_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.2	2.2e-46
WP_001297096.1|572624_573404_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|573403_574426_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
>prophage 3
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	1229316	1284071	4600755	transposase,protease,tRNA,integrase	uncultured_virus(16.67%)	53	1224654:1224672	1300649:1300667
1224654:1224672	attL	TAAAGGCGATAACTTTACC	NA	NA	NA	NA
WP_002208581.1|1229316_1229796_-|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	tRNA	NA	NA	NA	NA
WP_002208580.1|1230059_1230869_-	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_002223301.1|1231389_1234275_-	copper-exporting P-type ATPase CopA	NA	A0A218MNH6	uncultured_virus	36.8	1.0e-111
WP_002208578.1|1234481_1234901_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_002208577.1|1235009_1235459_-	NfeD family protein	NA	NA	NA	NA	NA
WP_002208576.1|1235461_1236376_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA	NA
WP_002208575.1|1236570_1237440_-	co-chaperone YbbN	NA	NA	NA	NA	NA
WP_002208574.1|1237516_1238293_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002208573.1|1238679_1239315_-|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	protease	NA	NA	NA	NA
WP_002208572.1|1239285_1239972_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.2	1.6e-31
WP_002208571.1|1239968_1242398_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002208570.1|1242441_1243506_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002208569.1|1243502_1244027_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA	NA
WP_002208568.1|1244322_1245045_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_002208567.1|1245055_1245550_-	peptidylprolyl isomerase B	NA	NA	NA	NA	NA
WP_002222677.1|1245760_1247146_+|tRNA	cysteine--tRNA ligase	tRNA	A0A0G2Y344	Acanthamoeba_polyphaga_mimivirus	28.5	2.2e-40
WP_002213775.1|1247492_1247951_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002209775.1|1248097_1248310_-	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_002209774.1|1248324_1249191_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	34.1	2.2e-30
WP_002215270.1|1249545_1249728_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_002215268.1|1249986_1250187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002228356.1|1250300_1250798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002215266.1|1250933_1251272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079866998.1|1251354_1251633_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A192Y6Q1	Salmonella_phage	73.5	4.2e-31
WP_002354559.1|1251844_1252051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002209770.1|1252450_1253053_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_002209769.1|1253045_1253975_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_002209768.1|1253984_1254617_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_002209767.1|1254613_1256377_+	bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002209766.1|1256369_1257689_+	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA	NA
WP_002209765.1|1257670_1258072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002215253.1|1258168_1258474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001297096.1|1258840_1259620_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|1259619_1260642_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002209764.1|1260735_1261629_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002209763.1|1261683_1262673_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_002209762.1|1262698_1263550_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.1	1.2e-49
WP_002209759.1|1264022_1265651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002209758.1|1265729_1268111_-	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002209757.1|1268269_1268800_-	GDYXXLXY domain-containing protein	NA	NA	NA	NA	NA
WP_002209756.1|1268792_1271000_-	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_002209743.1|1271451_1272660_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002209753.1|1273061_1273643_-	AbiEi antitoxin N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002224869.1|1273931_1274054_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002209752.1|1274177_1276094_-	autotransporter adhesin YapC	NA	NA	NA	NA	NA
WP_002209751.1|1276902_1277142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002227852.1|1277180_1277432_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002209749.1|1277455_1278028_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_002209748.1|1278039_1278441_-	DUF1240 domain-containing protein	NA	NA	NA	NA	NA
WP_002209746.1|1278673_1279075_-	DUF1240 domain-containing protein	NA	NA	NA	NA	NA
WP_002209745.1|1280596_1280842_+	helix-turn-helix domain-containing protein	NA	A0A2I7S995	Vibrio_phage	64.2	7.2e-19
WP_138921619.1|1281054_1283367_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_002213775.1|1283612_1284071_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
1300649:1300667	attR	TAAAGGCGATAACTTTACC	NA	NA	NA	NA
>prophage 4
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	1648080	1717076	4600755	transposase,plate,tRNA	Escherichia_phage(33.33%)	60	NA	NA
WP_002213759.1|1648080_1648539_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002208491.1|1648681_1649191_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002208490.1|1649239_1650967_-	phosphoenolpyruvate-protein phosphotransferase PtsI	NA	A0A1V0SGR7	Hokovirus	33.3	3.0e-18
WP_002208488.1|1651015_1651273_-	phosphocarrier protein Hpr	NA	NA	NA	NA	NA
WP_002222180.1|1651771_1652740_-	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	51.8	4.8e-74
WP_002213487.1|1652896_1653631_-	sulfate transporter CysZ	NA	NA	NA	NA	NA
WP_002227089.1|1653879_1654866_+	cell division protein ZipA	NA	NA	NA	NA	NA
WP_002213368.1|1654956_1656969_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	42.2	1.7e-142
WP_002213369.1|1656988_1657204_+	DUF3820 family protein	NA	NA	NA	NA	NA
WP_002213372.1|1657304_1657652_-	FlxA-like family protein	NA	NA	NA	NA	NA
WP_002213374.1|1657783_1658389_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_002213775.1|1659102_1659561_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002222185.1|1659753_1661169_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002211622.1|1662402_1663587_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_002211621.1|1664037_1665267_+	Nramp family divalent metal transporter	NA	NA	NA	NA	NA
WP_002216909.1|1665359_1665773_-	DUF2502 domain-containing protein	NA	NA	NA	NA	NA
WP_002232425.1|1665943_1666933_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_002211617.1|1667068_1667947_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211616.1|1668049_1668526_+	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_002211615.1|1668706_1669678_+	glucokinase	NA	NA	NA	NA	NA
WP_002211614.1|1669755_1671003_-	DUF1479 domain-containing protein	NA	NA	NA	NA	NA
WP_002211613.1|1671268_1672504_+	alanine transaminase	NA	NA	NA	NA	NA
WP_002211611.1|1672767_1673292_+	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	47.1	9.3e-24
WP_002211610.1|1673386_1673818_-	hypothetical protein	NA	Q7Y3V7	Yersinia_phage	48.2	2.4e-25
WP_002215847.1|1674407_1675079_+	lipoprotein	NA	NA	NA	NA	NA
WP_002215846.1|1675105_1675462_+	DUF4810 domain-containing protein	NA	NA	NA	NA	NA
WP_002211607.1|1675458_1676115_+	DUF799 domain-containing protein	NA	NA	NA	NA	NA
WP_002211606.1|1676360_1676930_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_002228419.1|1676926_1677523_-	molecular chaperone	NA	A0A077SLS7	Escherichia_phage	49.2	9.2e-44
WP_002211604.1|1678004_1678781_-	dimethyl sulfoxide reductase anchor subunit family protein	NA	A0A077SK59	Escherichia_phage	41.4	3.9e-42
WP_002211603.1|1678782_1679400_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	68.3	1.1e-87
WP_002228420.1|1679411_1681838_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	54.3	6.9e-255
WP_002211601.1|1682668_1683517_+	DUF4225 domain-containing protein	NA	NA	NA	NA	NA
WP_002354621.1|1683746_1684226_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_002211599.1|1684692_1685217_+	DUF2127 domain-containing protein	NA	NA	NA	NA	NA
WP_002211598.1|1685289_1686339_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	3.9e-21
WP_002215840.1|1686335_1687922_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_002211596.1|1687977_1688997_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002211594.1|1689325_1690420_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_002211590.1|1691685_1692288_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002215321.1|1692645_1693128_-	DcrB-related protein	NA	NA	NA	NA	NA
WP_002211588.1|1693124_1694807_-	OmpA family protein	NA	NA	NA	NA	NA
WP_002224806.1|1694807_1695509_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211586.1|1695505_1696843_-	glycosyl transferase	NA	A0A292GJ55	Xanthomonas_phage	32.8	2.0e-70
WP_002215319.1|1696882_1697914_-	fimbrial protein	NA	NA	NA	NA	NA
WP_002211584.1|1697920_1699102_-	ImpA family type VI secretion system protein	NA	NA	NA	NA	NA
WP_002211583.1|1699200_1700226_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002211582.1|1700225_1702106_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_002215317.1|1702888_1705564_+	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	32.3	1.0e-81
WP_002211580.1|1705764_1706310_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002211579.1|1706466_1707228_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA	NA
WP_002215157.1|1707355_1708906_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002209743.1|1708927_1710136_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211577.1|1710160_1711351_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002211576.1|1711335_1711944_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002211575.1|1712048_1712573_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_002211574.1|1712596_1714099_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_002211573.1|1714424_1714910_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_002211572.1|1715183_1715723_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002211571.1|1715726_1717076_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 5
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	2045058	2063010	4600755	coat,transposase,protease	Escherichia_phage(50.0%)	15	NA	NA
WP_000255944.1|2045058_2046081_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002215943.1|2046487_2046877_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_002210859.1|2046986_2047226_-	YebV family protein	NA	NA	NA	NA	NA
WP_002210858.1|2047433_2048423_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002210857.1|2048628_2051076_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002210856.1|2051246_2051999_-	molecular chaperone	NA	NA	NA	NA	NA
WP_002216611.1|2052029_2052587_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002216613.1|2052607_2053138_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002210852.1|2053143_2053698_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002216616.1|2054176_2056828_-	PqiB family protein	NA	NA	NA	NA	NA
WP_002367629.1|2056796_2058044_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA	NA
WP_002210850.1|2058275_2058773_+	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002210849.1|2058868_2059582_+	RNA chaperone ProQ	NA	NA	NA	NA	NA
WP_002210848.1|2059601_2061674_+	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	34.8	4.0e-86
WP_002210847.1|2062128_2063010_+|protease	protease HtpX	protease	NA	NA	NA	NA
>prophage 6
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	2367649	2467075	4600755	holin,tail,integrase,transposase,tRNA,lysis	Escherichia_phage(15.09%)	102	2415479:2415509	2456493:2456523
WP_002223594.1|2367649_2368072_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	32.5	5.8e-08
WP_000255944.1|2368130_2369153_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|2369152_2369932_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002210659.1|2370300_2370891_-	thymidine kinase	NA	A0A1Z1LYD5	Serratia_phage	55.8	1.5e-54
WP_002223593.1|2371640_2372048_+	DNA-binding transcriptional regulator H-NS	NA	NA	NA	NA	NA
WP_002210664.1|2372482_2373829_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	38.3	1.9e-81
WP_002210665.1|2374135_2375152_-	two-component system response regulator RssB	NA	NA	NA	NA	NA
WP_002210666.1|2376485_2376950_+	YchJ family protein	NA	NA	NA	NA	NA
WP_002209743.1|2377867_2379076_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211665.1|2379947_2380808_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211667.1|2381617_2382424_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_002211668.1|2382521_2382908_+	pyrimidine (deoxy)nucleoside triphosphate diphosphatase	NA	NA	NA	NA	NA
WP_002211669.1|2382920_2383211_-	DUF1496 domain-containing protein	NA	NA	NA	NA	NA
WP_002211670.1|2383207_2385133_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	30.4	4.2e-37
WP_002211671.1|2385179_2386226_-	selenide, water dikinase SelD	NA	NA	NA	NA	NA
WP_002211673.1|2386450_2387002_-	NAD(P)H nitroreductase	NA	NA	NA	NA	NA
WP_002211674.1|2387164_2389015_+	signal peptide peptidase SppA	NA	NA	NA	NA	NA
WP_002211675.1|2389131_2390148_+	asparaginase	NA	NA	NA	NA	NA
WP_002211676.1|2390162_2390810_+	bifunctional nicotinamidase/pyrazinamidase	NA	A0A2K9L6K4	Tupanvirus	33.0	1.8e-21
WP_002217933.1|2390943_2391216_-	YeaC family protein	NA	NA	NA	NA	NA
WP_002211677.1|2391286_2391700_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_002224141.1|2392047_2393043_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_002211679.1|2393356_2394232_+	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA	NA
WP_002430110.1|2394304_2395054_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_002211681.1|2395497_2397432_+	protein kinase YeaG	NA	NA	NA	NA	NA
WP_002216501.1|2397581_2398856_+	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	37.1	1.5e-11
WP_002211683.1|2398963_2400082_+	DMT family transporter	NA	NA	NA	NA	NA
WP_002211684.1|2400116_2401022_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211685.1|2401219_2402089_+	pirin family protein	NA	NA	NA	NA	NA
WP_002216508.1|2402353_2403556_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	29.1	7.6e-29
WP_002211686.1|2403571_2404876_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_002211687.1|2405341_2406877_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_002211688.1|2407094_2407814_-	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA	NA
WP_002227934.1|2409867_2410398_+	disulfide bond formation protein DsbB	NA	NA	NA	NA	NA
WP_002214494.1|2410814_2411171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211692.1|2412262_2413003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211693.1|2413019_2414219_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.6	2.4e-38
WP_002214492.1|2414222_2415395_+	MFS transporter	NA	NA	NA	NA	NA
2415479:2415509	attL	GTTATTTAGCCCAACTCGGCTTATTCAATAT	NA	NA	NA	NA
WP_002209743.1|2415699_2416908_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211695.1|2417128_2417548_-|tail	tail fiber assembly protein	tail	B6SCW7	Bacteriophage	42.0	5.7e-08
WP_002211696.1|2417558_2418476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211697.1|2418492_2419491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211698.1|2419490_2422694_-	host specificity protein J	NA	F1C571	Cronobacter_phage	60.5	0.0e+00
WP_002359202.1|2422869_2423091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211699.1|2423059_2423224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211700.1|2423265_2423886_-|tail	tail assembly protein	tail	K7PGY0	Enterobacteria_phage	57.0	3.2e-55
WP_002211701.1|2423941_2424157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002214482.1|2424299_2424851_-	zinc ribbon domain-containing protein	NA	S4TR42	Salmonella_phage	58.0	9.5e-27
WP_002211704.1|2424949_2425957_-	Bro-N domain-containing protein	NA	A0A2H4J0P1	uncultured_Caudovirales_phage	33.0	4.1e-36
WP_002211705.1|2426030_2426198_-	hypothetical protein	NA	G9L6D7	Escherichia_phage	61.8	5.2e-13
WP_002211706.1|2426321_2426753_+	Arc family DNA-binding protein	NA	G9L6D6	Escherichia_phage	58.4	2.5e-30
WP_002211707.1|2426831_2427464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211708.1|2427724_2428435_-	C40 family peptidase	NA	K7P6F5	Enterobacteria_phage	76.8	1.3e-108
WP_002211709.1|2428437_2429190_-|tail	phage minor tail protein L	tail	A0A1W6JNX9	Morganella_phage	67.7	9.4e-102
WP_002211710.1|2429363_2429705_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	50.0	1.7e-21
WP_002211711.1|2429707_2433211_-|tail	phage tail tape measure protein	tail	K7PMB9	Enterobacterial_phage	33.2	5.2e-118
WP_071530527.1|2433211_2433472_-	DUF1799 domain-containing protein	NA	A0A0S2SY90	Pseudomonas_phage	48.6	4.1e-12
WP_002211712.1|2433519_2433831_-	hypothetical protein	NA	I6PDG2	Cronobacter_phage	58.3	1.4e-30
WP_002211713.1|2433843_2434764_-	Ig-like domain-containing protein	NA	I6PBN6	Cronobacter_phage	49.1	4.4e-61
WP_002211714.1|2434829_2435237_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_002211715.1|2435233_2435818_-	hypothetical protein	NA	G8C7Q1	Escherichia_phage	52.1	3.6e-48
WP_002211716.1|2435819_2436170_-	hypothetical protein	NA	I6PD77	Cronobacter_phage	56.0	6.9e-31
WP_002211717.1|2436171_2436426_-	hypothetical protein	NA	J9Q7U0	Salmonella_phage	53.1	2.2e-18
WP_002211718.1|2436422_2436905_-	hypothetical protein	NA	G8C7P9	Escherichia_phage	46.1	6.4e-27
WP_002211719.1|2436952_2438158_-	Ig-like domain-containing protein	NA	A0A1B0VMF8	Pseudomonas_phage	79.2	1.8e-142
WP_002211720.1|2438171_2438945_-	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	62.3	2.8e-69
WP_002211721.1|2439066_2440179_-	hypothetical protein	NA	I6PD76	Cronobacter_phage	58.2	6.0e-121
WP_002228446.1|2440179_2440821_-	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	54.1	3.8e-59
WP_002228445.1|2440839_2441568_-	hypothetical protein	NA	A0A1B0VMH0	Pseudomonas_phage	51.4	4.6e-61
WP_002211722.1|2441567_2442542_-	hypothetical protein	NA	A0A1W6JNY3	Morganella_phage	81.1	2.3e-153
WP_002209743.1|2442546_2443755_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211723.1|2443802_2444387_-	hypothetical protein	NA	A0A0R6PHH0	Moraxella_phage	70.7	4.8e-69
WP_002211724.1|2444390_2444840_-	DUF2280 domain-containing protein	NA	I6S1P9	Salmonella_phage	72.9	1.0e-47
WP_002211725.1|2444870_2445506_-	hypothetical protein	NA	I6S676	Salmonella_phage	71.4	7.2e-87
WP_002211727.1|2445962_2446676_-	phage antirepressor KilAC domain-containing protein	NA	Q5MBW0	Stx1-converting_phage	60.2	7.6e-69
WP_002211729.1|2447221_2447680_-|lysis	lysis protein	lysis	A0A2H4JHL8	uncultured_Caudovirales_phage	45.3	4.9e-21
WP_002211730.1|2447664_2448177_-	lysozyme	NA	I6PBN2	Cronobacter_phage	61.6	9.7e-50
WP_002430108.1|2448207_2448405_-|holin	phage holin family protein	holin	B6SD15	Bacteriophage	64.4	4.9e-18
WP_002215644.1|2448650_2448926_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211731.1|2448922_2449132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002393183.1|2449294_2449471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211732.1|2449555_2450119_-	Bro-N domain-containing protein	NA	B6SD63	Bacteriophage	58.0	9.4e-30
WP_002215638.1|2450167_2450386_-	ash family protein	NA	NA	NA	NA	NA
WP_002215636.1|2450389_2450779_-	antitermination protein	NA	A0A1W6JNX1	Morganella_phage	68.8	1.4e-45
WP_002211735.1|2450779_2451385_-	recombination protein NinG	NA	A0A1P8DTE0	Proteus_phage	56.9	2.8e-56
WP_002211736.1|2451458_2451905_-	recombination protein NinB	NA	A0A2H4J8D9	uncultured_Caudovirales_phage	62.5	3.9e-47
WP_002215632.1|2452929_2453190_+	excisionase family protein	NA	Q859D3	Escherichia_coli_phage	42.9	1.7e-10
WP_001297096.1|2453357_2454137_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|2454136_2455159_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002211738.1|2455228_2456467_+|integrase	site-specific integrase	integrase	Q20GI2	Phage_258-320	53.3	2.3e-121
WP_002211739.1|2456493_2456940_-	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
2456493:2456523	attR	GTTATTTAGCCCAACTCGGCTTATTCAATAT	NA	NA	NA	NA
WP_002211740.1|2457042_2457699_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_002215627.1|2457769_2458855_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_002211743.1|2458995_2459268_-	YcgL domain-containing protein	NA	NA	NA	NA	NA
WP_002220631.1|2459988_2460675_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_002211179.1|2460699_2461512_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_002211180.1|2461515_2461785_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_002211181.1|2462021_2463143_-	ribonuclease D	NA	NA	NA	NA	NA
WP_002220632.1|2463302_2464991_-	long-chain-fatty-acid--CoA ligase FadD	NA	A0A2H4PQM9	Staphylococcus_phage	28.9	3.0e-31
WP_087768167.1|2465526_2465634_+	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002211183.1|2465634_2466240_-	Slp family lipoprotein	NA	NA	NA	NA	NA
WP_002211184.1|2466376_2467075_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
>prophage 7
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	2918400	2989133	4600755	transposase,plate,tRNA,lysis	Indivirus(10.0%)	51	NA	NA
WP_002211870.1|2918400_2920428_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.1	8.0e-55
WP_002213775.1|2920591_2921050_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002228565.1|2921267_2921930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211975.1|2922627_2923704_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002211974.1|2923721_2924975_+	LVIVD repeat-containing protein	NA	NA	NA	NA	NA
WP_002211973.1|2925307_2926489_+	MFS transporter	NA	NA	NA	NA	NA
WP_002211971.1|2926730_2927138_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_002211970.1|2927134_2927830_+|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
WP_002211969.1|2928155_2929040_+	cytidine deaminase	NA	NA	NA	NA	NA
WP_002211968.1|2929395_2931093_+	NAD-dependent malic enzyme	NA	NA	NA	NA	NA
WP_002211966.1|2931373_2932111_+	outer membrane permeability protein SanA	NA	NA	NA	NA	NA
WP_002211965.1|2932555_2933566_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA	NA
WP_002211964.1|2933586_2935107_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.9	2.6e-10
WP_002211963.1|2935336_2936329_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA	NA
WP_002211961.1|2937076_2938243_-	DUF418 family protein	NA	NA	NA	NA	NA
WP_002211960.1|2938297_2938960_-	GTP cyclohydrolase I FolE	NA	R9TJA5	Vibrio_phage	53.5	5.8e-55
WP_002211959.1|2939143_2940295_-	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA	NA
WP_002211958.1|2940430_2941300_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211957.1|2941573_2942713_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.9	5.2e-35
WP_002211956.1|2942733_2943576_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_002227980.1|2943832_2944045_+	peptide antibiotic darobactin C	NA	NA	NA	NA	NA
WP_002215886.1|2944128_2946489_+	darobactin export ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002211952.1|2946490_2947753_+	darobactin export ABC transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_002211951.1|2947754_2948423_+	darobactin export ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	1.4e-35
WP_002211950.1|2948432_2949743_+	darobactin maturation radical SAM/SPASM protein DarE	NA	NA	NA	NA	NA
WP_002211949.1|2950277_2951552_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_002211948.1|2951553_2952324_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_002209743.1|2952459_2953668_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211947.1|2953711_2954365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002227996.1|2954592_2956188_-	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	28.5	6.1e-58
WP_002211945.1|2956870_2957494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211944.1|2957705_2959073_-	ImpA family type VI secretion system protein	NA	NA	NA	NA	NA
WP_002214552.1|2959550_2960132_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002211941.1|2960106_2961192_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002211940.1|2961155_2962919_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_002211939.1|2963139_2963595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211938.1|2963609_2964668_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_002211937.1|2964685_2966287_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_002211936.1|2966330_2969753_-	type VI secretion system membrane subunit	NA	NA	NA	NA	NA
WP_002211935.1|2969749_2970982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002214564.1|2973146_2973617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041175909.1|2973789_2975973_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_002211931.1|2975988_2976249_-	DUF2345 domain-containing protein	NA	NA	NA	NA	NA
WP_002211930.1|2976402_2977176_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011055627.1|2977172_2979473_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_002231240.1|2979488_2981837_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.1	4.5e-17
WP_002223447.1|2981839_2984479_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.5	1.5e-90
WP_002210014.1|2984866_2985358_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_002228049.1|2985361_2987098_-	OmpA family protein	NA	NA	NA	NA	NA
WP_002210015.1|2987097_2987784_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_002211664.1|2987780_2989133_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 8
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	3020691	3094065	4600755	transposase,protease,tRNA	Escherichia_phage(21.05%)	53	NA	NA
WP_002213775.1|3020691_3021150_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002226586.1|3021318_3021774_-	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_002224683.1|3021984_3023736_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_002220006.1|3023804_3024323_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_002211286.1|3024588_3024777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000255944.1|3025410_3026433_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|3026432_3027212_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002213775.1|3028372_3028831_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002228015.1|3029028_3029196_-	ribosome modulation factor	NA	NA	NA	NA	NA
WP_002211289.1|3029465_3030044_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_002211290.1|3030040_3031693_-	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_002211291.1|3031679_3032966_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_002211292.1|3033094_3035008_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	28.9	1.5e-47
WP_002211293.1|3035013_3037134_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_002211294.1|3037233_3038346_+	YcbX family protein	NA	NA	NA	NA	NA
WP_002211295.1|3038371_3038923_-	cell division protein ZapC	NA	NA	NA	NA	NA
WP_002211296.1|3039105_3040116_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_002220013.1|3040769_3043385_-	aminopeptidase N	NA	NA	NA	NA	NA
WP_002228013.1|3044100_3045306_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_002211301.1|3045804_3047205_+|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.2	6.5e-80
WP_002354007.1|3047505_3048585_+	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	56.5	3.2e-111
WP_002211303.1|3048841_3050032_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_002430096.1|3050185_3050302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211304.1|3050455_3051103_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	32.3	2.2e-22
WP_002211305.1|3051163_3051712_-	YcbK family protein	NA	A0A0K1LLY2	Rhodobacter_phage	34.7	7.8e-05
WP_002217987.1|3051935_3053792_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_002213759.1|3054075_3054534_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002211308.1|3054749_3059207_-	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_002211309.1|3059203_3059932_-	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_002211310.1|3059912_3061235_-	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_002211311.1|3061231_3062017_-|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_002211313.1|3062789_3063683_-	YcbJ family phosphotransferase	NA	NA	NA	NA	NA
WP_002211314.1|3064045_3064798_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_002211315.1|3064794_3064977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211317.1|3065524_3065734_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	50.0	3.0e-10
WP_002216263.1|3066460_3067897_+	VOC family protein	NA	NA	NA	NA	NA
WP_002211319.1|3067904_3068891_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_002211320.1|3068887_3070636_-	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	31.5	8.7e-66
WP_002211321.1|3070671_3072963_-	ComEC family protein	NA	NA	NA	NA	NA
WP_002211322.1|3073509_3073794_-	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	2.4e-10
WP_002211323.1|3073854_3075528_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_002211324.1|3075701_3076394_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_002211325.1|3076706_3077993_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_002211326.1|3078155_3079241_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	46.1	4.4e-84
WP_002211327.1|3079607_3081455_-	YadA-like family protein	NA	NA	NA	NA	NA
WP_002211328.1|3081475_3082570_-	YadA-like family protein	NA	B0FIT1	Escherichia_phage	32.7	3.7e-06
WP_002211329.1|3082838_3083876_-	L-asparaginase 2	NA	NA	NA	NA	NA
WP_002211330.1|3084024_3085791_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA	NA
WP_002211331.1|3086488_3087346_+	formate transporter FocA	NA	NA	NA	NA	NA
WP_002211332.1|3087401_3089684_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.2	1.6e-157
WP_002211333.1|3089801_3090476_-	glycosyltransferase family 25 protein	NA	A0A2H4UUT1	Bodo_saltans_virus	40.5	7.8e-31
WP_002211334.1|3091462_3092197_+	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	27.4	3.6e-21
WP_000255944.1|3093042_3094065_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
>prophage 9
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	3107892	3117529	4600755	transposase,protease,tRNA	Brazilian_cedratvirus(16.67%)	8	NA	NA
WP_002211344.1|3107892_3109617_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	31.8	3.3e-17
WP_002211346.1|3109835_3110546_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_002211347.1|3110711_3110930_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002213759.1|3111301_3111760_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002211348.1|3112052_3114329_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.7	7.4e-166
WP_002211349.1|3114354_3114675_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	42.7	8.2e-15
WP_002211350.1|3115035_3115299_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	59.7	3.6e-16
WP_002211351.1|3115579_3117529_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	37.7	8.8e-35
>prophage 10
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	3227059	3245423	4600755	coat,transposase,plate,tail	Vibrio_phage(25.0%)	18	NA	NA
WP_002213775.1|3227059_3227518_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002208835.1|3227718_3228723_-	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	47.7	3.1e-84
WP_002208836.1|3228900_3229128_+	YejL family protein	NA	NA	NA	NA	NA
WP_002208837.1|3229155_3230952_+	DUF3413 domain-containing protein	NA	NA	NA	NA	NA
WP_002208839.1|3231921_3233070_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_002208840.1|3233082_3233571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002208841.1|3234270_3234633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002208842.1|3234758_3236195_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_002208843.1|3236485_3237226_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002208845.1|3237523_3238303_-|tail	tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	52.4	7.1e-52
WP_002208846.1|3238399_3238747_-	DUF2313 domain-containing protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	41.3	6.4e-21
WP_002215458.1|3238743_3239004_-	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_002208847.1|3239000_3240137_-|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	30.5	4.5e-31
WP_002208848.1|3240140_3240596_-	phage GP46 family protein	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
WP_002215460.1|3240592_3241189_-|plate	phage baseplate assembly protein	plate	NA	NA	NA	NA
WP_002208850.1|3241204_3242260_-|tail	tail protein	tail	M1PVV2	Vibrio_phage	27.2	1.3e-37
WP_002208852.1|3242256_3243663_-	DNA circularization protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
WP_002208853.1|3243929_3245423_-|coat	coat protein	coat	NA	NA	NA	NA
>prophage 11
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	3396305	3402477	4600755	transposase	Escherichia_phage(33.33%)	8	NA	NA
WP_002210709.1|3396305_3396506_+	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	51.7	1.6e-08
WP_002215949.1|3396505_3397048_+	ash family protein	NA	NA	NA	NA	NA
WP_002215950.1|3397040_3398000_+	toprim domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	41.0	1.6e-50
WP_002210707.1|3397996_3399085_+	AAA family ATPase	NA	A0A2H4JFA4	uncultured_Caudovirales_phage	60.4	1.4e-114
WP_002210705.1|3399433_3399748_-	putative addiction module antidote protein	NA	NA	NA	NA	NA
WP_002215951.1|3399753_3400071_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	48.1	2.0e-13
WP_000255944.1|3400675_3401698_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|3401697_3402477_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
>prophage 12
NC_004088	Yersinia pestis KIM10+, complete sequence	4600755	4004050	4079739	4600755	transposase,holin,plate	Escherichia_phage(16.67%)	58	NA	NA
WP_002210419.1|4004050_4004446_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_002210420.1|4004442_4004727_+	YqjK-like family protein	NA	NA	NA	NA	NA
WP_002210421.1|4005030_4005426_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000255944.1|4005704_4006727_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|4006726_4007506_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002210424.1|4007767_4008154_-	8-oxo-dGTP diphosphatase MutT	NA	A0A0B5CYJ3	Rhizoctonia_fumigata_mycovirus	30.4	8.4e-06
WP_002210426.1|4008448_4011163_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_002210427.1|4011240_4011774_-	secA regulator SecM	NA	NA	NA	NA	NA
WP_002210428.1|4011802_4012327_+	DUF721 domain-containing protein	NA	NA	NA	NA	NA
WP_002228285.1|4012493_4013414_-	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
WP_002210430.1|4013513_4014665_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_002210431.1|4014737_4015994_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_002228100.1|4016020_4016848_-	cell division protein FtsQ	NA	NA	NA	NA	NA
WP_002210432.1|4016849_4017770_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_002216457.1|4017762_4019238_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_002210434.1|4019375_4020446_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_002210435.1|4020442_4021645_-	cell division protein FtsW	NA	NA	NA	NA	NA
WP_002210436.1|4021644_4022961_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_002210437.1|4022963_4024046_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_002210438.1|4024039_4025416_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_002210439.1|4025412_4026900_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_002210440.1|4026886_4028650_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA	NA
WP_002210441.1|4028715_4029033_-	cell division protein FtsL	NA	NA	NA	NA	NA
WP_002210442.1|4029029_4029992_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_002210443.1|4029994_4030453_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_087768171.1|4031007_4031097_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002210446.1|4031554_4031995_+	L-alanine exporter AlaE	NA	NA	NA	NA	NA
WP_002210447.1|4032125_4033136_-	catabolite repressor/activator	NA	NA	NA	NA	NA
WP_002213775.1|4033640_4034099_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002210448.1|4034297_4034792_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_002228103.1|4034794_4036522_-	acetolactate synthase 3 large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.4	7.8e-59
WP_002216437.1|4036981_4038787_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.2	3.5e-38
WP_002216434.1|4039340_4040297_-	transcriptional regulator LeuO	NA	NA	NA	NA	NA
WP_002210452.1|4040974_4041190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002213759.1|4041618_4042077_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002224085.1|4042223_4043786_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_002210454.1|4043788_4044880_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_002210455.1|4044881_4046312_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_002210456.1|4046326_4046929_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_002224086.1|4047169_4048351_-	MFS transporter	NA	NA	NA	NA	NA
WP_002231469.1|4049014_4050676_+	HTH-type transcriptional regulator SgrR	NA	NA	NA	NA	NA
WP_002214274.1|4051615_4052608_+	thiamine ABC transporter substrate binding subunit	NA	NA	NA	NA	NA
WP_002214276.1|4052583_4054191_+	thiamine/thiamine pyrophosphate ABC transporter permease ThiP	NA	NA	NA	NA	NA
WP_002210464.1|4054177_4054888_+	thiamine ABC transporter ATP-binding protein ThiQ	NA	G3M9Y6	Bacillus_virus	34.1	1.0e-20
WP_002210465.1|4054956_4055724_-	DedA family protein	NA	NA	NA	NA	NA
WP_002210466.1|4055919_4058289_+	DNA polymerase II	NA	A0A0P0YM26	Yellowstone_lake_phycodnavirus	25.5	1.5e-31
WP_002220588.1|4058749_4061656_+	RNA polymerase-associated protein RapA	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	37.6	3.0e-23
WP_002210468.1|4061911_4062265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002210469.1|4065789_4067400_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_002210470.1|4067396_4068752_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_002210471.1|4068871_4069363_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002214737.1|4069355_4069721_-	DUF4150 domain-containing protein	NA	NA	NA	NA	NA
WP_002210473.1|4069726_4070344_-	DUF3540 domain-containing protein	NA	NA	NA	NA	NA
WP_002214739.1|4070336_4071440_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002224087.1|4071465_4073685_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002210474.1|4073697_4076046_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.9	2.1e-14
WP_002210475.1|4076149_4078738_-	type VI secretion system ATPase TssH	NA	A0A248SJW6	Salicola_phage	28.7	1.9e-77
WP_002210476.1|4078755_4079739_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 1
NC_004838	Yersinia pestis KIM10+ plasmid pMT-1, complete sequence	100990	0	76603	100990	transposase,terminase,tail	Salmonella_phage(75.0%)	75	NA	NA
WP_002214164.1|716_1781_-	replication protein RepA	NA	J9Q7H0	Salmonella_phage	98.6	2.4e-188
WP_002214160.1|2525_3170_+	hypothetical protein	NA	J9Q739	Salmonella_phage	98.1	1.8e-122
WP_002213298.1|3529_4552_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002213300.1|4967_6053_+	metallophosphoesterase	NA	J9Q7S9	Salmonella_phage	98.6	7.7e-206
WP_002214148.1|6282_8199_+	AAA family ATPase	NA	J9Q741	Salmonella_phage	98.6	0.0e+00
WP_011114035.1|8188_8935_+	hypothetical protein	NA	J9Q6J5	Salmonella_phage	96.0	1.2e-133
WP_002214145.1|8947_9517_+	hypothetical protein	NA	J9Q7Z7	Salmonella_phage	100.0	5.8e-104
WP_002213759.1|9725_10184_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	35.3	5.0e-13
WP_002211802.1|10383_10665_+	hypothetical protein	NA	J9Q753	Salmonella_phage	93.5	6.1e-46
WP_002211801.1|10870_11353_+	hypothetical protein	NA	J9Q805	Salmonella_phage	94.4	5.1e-85
WP_002214137.1|11991_12219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211799.1|12303_12954_-	hypothetical protein	NA	J9Q754	Salmonella_phage	99.5	4.1e-114
WP_002214134.1|13277_13805_-	transcriptional regulator	NA	J9Q6L0	Salmonella_phage	98.0	6.4e-81
WP_002211796.1|13809_14232_-	hypothetical protein	NA	J9Q806	Salmonella_phage	85.0	4.1e-62
WP_002214131.1|14291_14570_-	hypothetical protein	NA	J9Q7T9	Salmonella_phage	97.8	4.4e-41
WP_002211794.1|14572_16132_-	DEAD/DEAH box helicase	NA	J9Q7I4	Salmonella_phage	99.0	1.1e-293
WP_002228791.1|16196_16895_+	ParB N-terminal domain-containing protein	NA	J9Q756	Salmonella_phage	98.7	9.6e-125
WP_002211792.1|16894_17563_+	ParB N-terminal domain-containing protein	NA	J9Q6L1	Salmonella_phage	98.2	9.5e-114
WP_002211791.1|17559_18198_+	ATP-binding cassette domain-containing protein	NA	J9Q807	Salmonella_phage	98.1	4.7e-110
WP_002211790.1|18190_18445_+	hypothetical protein	NA	J9Q7U0	Salmonella_phage	97.6	2.0e-40
WP_002211789.1|18450_19341_+	hypothetical protein	NA	J9Q7I6	Salmonella_phage	99.7	6.2e-169
WP_000176291.1|19350_19617_+	hypothetical protein	NA	J9Q757	Salmonella_phage	100.0	1.3e-42
WP_002211788.1|19812_20454_+	hypothetical protein	NA	J9Q6D4	Salmonella_phage	98.1	1.2e-108
WP_002211787.1|20456_21713_+|terminase	terminase	terminase	J9Q7Y2	Salmonella_phage	100.0	1.8e-251
WP_002211786.1|21746_23321_+	hypothetical protein	NA	J9Q7R1	Salmonella_phage	99.2	2.4e-301
WP_002211784.1|24270_25146_+	hypothetical protein	NA	J9Q710	Salmonella_phage	99.7	8.5e-163
WP_002211783.1|25220_25883_+	Ig domain-containing protein	NA	J9Q6D6	Salmonella_phage	97.2	8.5e-107
WP_002211782.1|25926_26361_+	hypothetical protein	NA	J9Q7Y3	Salmonella_phage	99.3	3.1e-73
WP_002211781.1|26360_27194_+	hypothetical protein	NA	J9Q7R2	Salmonella_phage	99.6	2.9e-152
WP_001027662.1|27291_27636_+	hypothetical protein	NA	J9Q7F6	Salmonella_phage	100.0	1.9e-57
WP_002211780.1|27626_28100_+	hypothetical protein	NA	J9Q711	Salmonella_phage	99.4	8.9e-82
WP_002211779.1|28101_28485_+	hypothetical protein	NA	J9Q6D8	Salmonella_phage	98.4	1.1e-66
WP_002211778.1|28559_29306_+	Ig domain-containing protein	NA	J9Q7Y4	Salmonella_phage	98.8	5.2e-129
WP_000163862.1|29365_29683_+	hypothetical protein	NA	J9Q7R3	Salmonella_phage	98.1	6.0e-50
WP_000952684.1|29808_30033_+	hypothetical protein	NA	J9Q7F7	Salmonella_phage	100.0	4.2e-34
WP_002211776.1|30040_34618_+	tape measure protein	NA	J9Q712	Salmonella_phage	90.5	0.0e+00
WP_000440566.1|34659_34995_+|tail	phage tail protein	tail	J9Q6E1	Salmonella_phage	97.3	5.7e-59
WP_002211775.1|35084_35783_+|tail	phage minor tail protein L	tail	J9Q7Y5	Salmonella_phage	99.1	7.1e-136
WP_002211774.1|35775_36573_+	C40 family peptidase	NA	J9Q7R4	Salmonella_phage	96.2	1.4e-156
WP_002211773.1|36560_37148_+|tail	tail assembly protein	tail	J9Q7F8	Salmonella_phage	92.8	5.1e-103
WP_002214118.1|37169_41801_+	DUF1983 domain-containing protein	NA	J9Q713	Salmonella_phage	88.6	0.0e+00
WP_002211771.1|41857_42436_+	DUF4376 domain-containing protein	NA	Q9LA61	Enterobacterial_phage	38.8	3.4e-27
WP_002211770.1|42516_45405_+|tail	phage tail protein	tail	J9Q6E3	Salmonella_phage	33.1	4.5e-11
WP_002211769.1|45706_46315_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	62.2	4.8e-64
WP_001297096.1|46448_47228_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|47227_48250_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002228771.1|48651_49128_-	hypothetical protein	NA	J9Q7R9	Salmonella_phage	95.6	5.1e-77
WP_002224265.1|49209_50004_-	hypothetical protein	NA	J9Q7Z0	Salmonella_phage	96.6	3.7e-141
WP_002224263.1|50256_50979_+	DUF4145 domain-containing protein	NA	NA	NA	NA	NA
WP_002209743.1|51012_52221_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211760.1|52689_53712_+|transposase	IS110-like element IS1618 family transposase	transposase	NA	NA	NA	NA
WP_002211758.1|55787_57551_-	phospholipase D	NA	NA	NA	NA	NA
WP_002211757.1|57628_58117_-	phospholipase D family protein	NA	NA	NA	NA	NA
WP_002211756.1|58855_59131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002215065.1|59153_60095_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	54.8	1.0e-68
WP_002211754.1|60160_60781_-	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	31.1	6.5e-08
WP_002215068.1|60980_61307_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002211753.1|61306_61534_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_002211752.1|61835_63041_+	AAA family ATPase	NA	Q1MVJ3	Enterobacteria_phage	90.5	1.7e-206
WP_002215070.1|63037_64009_+	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	67.3	1.5e-112
WP_002228775.1|64387_65785_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_002211750.1|65946_66147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211749.1|66647_67325_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
WP_002211748.1|67324_67546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002215082.1|67556_67976_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
WP_002211747.1|68029_68809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211746.1|69207_69714_+	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	29.5	1.1e-08
WP_002211745.1|70426_70657_+	DUF905 domain-containing protein	NA	NA	NA	NA	NA
WP_002211744.1|70729_72739_+	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	30.3	7.7e-26
WP_000255944.1|72862_73885_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|73884_74664_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002233024.1|74739_75777_+	DNA ligase	NA	J9Q7G5	Salmonella_phage	99.4	1.8e-207
WP_002224361.1|75936_76152_+	hypothetical protein	NA	J9Q6I3	Salmonella_phage	98.6	7.7e-33
WP_002225462.1|76148_76301_+	hypothetical protein	NA	J9Q7Z1	Salmonella_phage	96.0	2.0e-19
WP_002224363.1|76297_76603_+	hypothetical protein	NA	J9Q7S1	Salmonella_phage	97.0	3.2e-48
>prophage 2
NC_004838	Yersinia pestis KIM10+ plasmid pMT-1, complete sequence	100990	83005	100925	100990	integrase	Salmonella_phage(94.12%)	20	76146:76163	89205:89222
76146:76163	attL	CCAATGATTCCATACATC	NA	NA	NA	NA
WP_002353208.1|83005_84109_+|integrase	site-specific integrase	integrase	A0A1P8DTG6	Proteus_phage	30.9	5.2e-24
WP_002228802.1|84103_84490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002228800.1|84752_84965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211766.1|85074_87441_+	porphyrin biosynthesis protein	NA	J9Q7G6	Salmonella_phage	94.4	0.0e+00
WP_002211767.1|87538_88774_+	AAA family ATPase	NA	J9Q733	Salmonella_phage	99.3	3.0e-238
WP_002221186.1|88954_92479_+	DNA polymerase III subunit alpha	NA	J9Q7Z2	Salmonella_phage	99.2	0.0e+00
89205:89222	attR	GATGTATGGAATCATTGG	NA	NA	NA	NA
WP_002425587.1|92493_92919_+	hypothetical protein	NA	J9Q7S4	Salmonella_phage	100.0	7.5e-72
WP_002213141.1|92948_93512_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	64.6	2.2e-63
WP_002215095.1|93584_93836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011114024.1|94056_94488_+	hypothetical protein	NA	J9Q6I8	Salmonella_phage	97.9	2.2e-71
WP_002213132.1|94607_95636_+	hypothetical protein	NA	J9Q7Z3	Salmonella_phage	98.5	1.3e-165
WP_002225551.1|95696_96641_+	exonuclease	NA	J9Q7S6	Salmonella_phage	99.0	1.3e-180
WP_000920226.1|96640_96907_+	hypothetical protein	NA	J9Q7G8	Salmonella_phage	100.0	1.6e-40
WP_002213439.1|98076_98277_+	hypothetical protein	NA	J9Q6J0	Salmonella_phage	97.0	1.1e-25
WP_002222866.1|98280_99111_+	hypothetical protein	NA	J9Q7Z4	Salmonella_phage	98.6	9.3e-127
WP_002222868.1|99264_99636_+	DUF2591 domain-containing protein	NA	J9Q7S7	Salmonella_phage	87.8	4.0e-61
WP_002222869.1|99619_100030_+	hypothetical protein	NA	J9Q7G9	Salmonella_phage	97.8	4.1e-75
WP_002228797.1|100097_100373_+	hypothetical protein	NA	J9Q738	Salmonella_phage	95.6	1.7e-45
WP_002228796.1|100413_100593_+	hypothetical protein	NA	J9Q6J1	Salmonella_phage	86.4	5.8e-18
WP_002227818.1|100589_100925_+	hypothetical protein	NA	J9Q7Z5	Salmonella_phage	91.0	5.2e-52
