assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000005825.2_ASM582v2	NC_013791	Bacillus pseudofirmus OF4, complete sequence	1	3142858-3142953	1	CRISPRCasFinder	no		cas3,csa3,WYL,DinG,DEDDh	Orphan	GCTGCAGGTACTCGCTTTCCGCGGGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DinG,DEDDh,cas14j,RT,cas14k	NA|47aa|up_5|NC_013791.2_3139669_3139810_-,NA|118aa|up_0|NC_013791.2_3142457_3142811_+,NA	NA|218aa|up_9|NC_013791.2_3135806_3136460_+	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism]	NA|224aa|up_8|NC_013791.2_3136443_3137115_+	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism]	NA|285aa|up_7|NC_013791.2_3137239_3138094_+	PRK03187, tgl, transglutaminase; Provisional	NA|494aa|up_6|NC_013791.2_3138119_3139601_-	COG1231, COG1231, Monoamine oxidase [Amino acid transport and metabolism]	NA|47aa|up_5|NC_013791.2_3139669_3139810_-	NA	NA|204aa|up_4|NC_013791.2_3139873_3140485_-	pfam04471, Mrr_cat, Restriction endonuclease	NA|244aa|up_3|NC_013791.2_3140708_3141440_+	cd05233, SDR_c, classical (c) SDRs	NA|171aa|up_2|NC_013791.2_3141429_3141942_+	COG0809, QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) [Translation, ribosomal structure and biogenesis]	NA|168aa|up_1|NC_013791.2_3141957_3142461_+	pfam02547, Queuosine_synth, Queuosine biosynthesis protein	NA|118aa|up_0|NC_013791.2_3142457_3142811_+	NA	NA|212aa|down_0|NC_013791.2_3143135_3143771_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|379aa|down_1|NC_013791.2_3143770_3144907_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|205aa|down_2|NC_013791.2_3145022_3145637_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|422aa|down_3|NC_013791.2_3145831_3147097_+	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|566aa|down_4|NC_013791.2_3147182_3148880_-	pfam16949, ABC_tran_2, Putative ATP-binding cassette	NA|265aa|down_5|NC_013791.2_3148890_3149685_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|533aa|down_6|NC_013791.2_3149809_3151408_-	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism]	NA|223aa|down_7|NC_013791.2_3151404_3152073_-	COG0704, PhoU, Phosphate uptake regulator [Inorganic ion transport and metabolism]	NA|434aa|down_8|NC_013791.2_3152150_3153452_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|270aa|down_9|NC_013791.2_3153474_3154284_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
GCF_000005825.2_ASM582v2	NC_013791	Bacillus pseudofirmus OF4, complete sequence	2	3593513-3593629	2	CRISPRCasFinder	no		cas3,csa3,WYL,DinG,DEDDh	Orphan	CTTGAACTGCCCAACCCCTAACCACCTA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DinG,DEDDh,cas14j,RT,cas14k	NA,NA	NA|366aa|up_9|NC_013791.2_3582903_3584001_-	cd03821, GT4_Bme6-like, Brucella melitensis Bme6 and similar proteins	NA|369aa|up_8|NC_013791.2_3584030_3585137_-	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|407aa|up_7|NC_013791.2_3585144_3586365_-	TIGR03026, NDP-sugDHase, nucleotide sugar dehydrogenase	NA|420aa|up_6|NC_013791.2_3586377_3587637_-	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|206aa|up_5|NC_013791.2_3587640_3588258_-	TIGR03570, NeuD_NnaD, sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	NA|208aa|up_4|NC_013791.2_3588254_3588878_-	pfam02397, Bac_transf, Bacterial sugar transferase	NA|372aa|up_3|NC_013791.2_3588898_3590014_-	TIGR04181, DegT/DnrJ/EryC1/StrS_aminotransferase, aminotransferase, LLPSF_NHT_00031 family	NA|119aa|up_2|NC_013791.2_3590678_3591035_-	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins	NA|296aa|up_1|NC_013791.2_3591585_3592473_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|119aa|up_0|NC_013791.2_3593081_3593438_-	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins	NA|607aa|down_0|NC_013791.2_3594183_3596004_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|255aa|down_1|NC_013791.2_3596292_3597057_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|157aa|down_2|NC_013791.2_3597450_3597921_+	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation	NA|277aa|down_3|NC_013791.2_3598743_3599574_-	pfam13472, Lipase_GDSL_2, GDSL-like Lipase/Acylhydrolase family	NA|549aa|down_4|NC_013791.2_3599607_3601254_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|483aa|down_5|NC_013791.2_3601376_3602825_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|387aa|down_6|NC_013791.2_3602865_3604026_-	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|150aa|down_7|NC_013791.2_3604038_3604488_-	TIGR04011, poly_gGlu_PgsC, poly-gamma-glutamate biosynthesis protein PgsC/CapC	NA|397aa|down_8|NC_013791.2_3604504_3605695_-	TIGR04012, poly_gGlu_PgsB, poly-gamma-glutamate synthase PgsB/CapB	NA|892aa|down_9|NC_013791.2_3606482_3609158_-	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins
GCF_000005825.2_ASM582v2	NC_013792	Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence	1	175709-175800	1	CRISPRCasFinder	no	RT,cas14j	cas14j,csa3,RT,cas14k	Unclear	TACCCCTGTTAGACGGAGTACAATACCCC	29	0	0	NA	NA	NA	1	1	TypeV	cas3,csa3,WYL,DinG,DEDDh,cas14j,RT,cas14k	NA|95aa|up_8|NC_013792.1_165851_166136_+,NA|391aa|up_7|NC_013792.1_166240_167413_-,NA|49aa|up_6|NC_013792.1_167535_167682_-,NA|480aa|up_0|NC_013792.1_173855_175295_-,NA|365aa|down_0|NC_013792.1_175902_176997_-,NA|229aa|down_2|NC_013792.1_177458_178145_+,NA|71aa|down_3|NC_013792.1_178226_178439_+,NA|58aa|down_4|NC_013792.1_178541_178715_+,NA|271aa|down_8|NC_013792.1_183651_184464_-	NA|111aa|up_9|NC_013792.1_165474_165807_+	pfam14074, DUF4257, Protein of unknown function (DUF4257)	NA|95aa|up_8|NC_013792.1_165851_166136_+	NA	NA|391aa|up_7|NC_013792.1_166240_167413_-	NA	NA|49aa|up_6|NC_013792.1_167535_167682_-	NA	NA|208aa|up_5|NC_013792.1_167792_168416_-	pfam04002, RadC, RadC-like JAB domain	NA|152aa|up_4|NC_013792.1_168515_168971_-	PRK06751, PRK06751, single-stranded DNA-binding protein; Provisional	NA|96aa|up_3|NC_013792.1_169016_169304_-	pfam12965, DUF3854, Domain of unknown function (DUF3854)	RT|625aa|up_2|NC_013792.1_169516_171391_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|351aa|up_1|NC_013792.1_172125_173178_-	TIGR01391, DNA_primase, DNA primase, catalytic core	NA|480aa|up_0|NC_013792.1_173855_175295_-	NA	NA|365aa|down_0|NC_013792.1_175902_176997_-	NA	NA|56aa|down_1|NC_013792.1_177152_177320_-	pfam12651, RHH_3, Ribbon-helix-helix domain	NA|229aa|down_2|NC_013792.1_177458_178145_+	NA	NA|71aa|down_3|NC_013792.1_178226_178439_+	NA	NA|58aa|down_4|NC_013792.1_178541_178715_+	NA	NA|452aa|down_5|NC_013792.1_178866_180222_-	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|608aa|down_6|NC_013792.1_180349_182173_-	cd01454, vWA_norD_type, norD type: Denitrifying bacteria contain both membrane bound and periplasmic nitrate reductases	NA|467aa|down_7|NC_013792.1_182175_183576_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|271aa|down_8|NC_013792.1_183651_184464_-	NA	NA|192aa|down_9|NC_013792.1_184460_185036_-	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins
