The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134531	Pragia fontium strain NCTC12284 genome assembly, chromosome: 1	4038704	1065846	1082230	4038704	tail	Erwinia_phage(31.25%)	23	NA	NA
VEJ54275.1|1065846_1066164_+	Uncharacterised protein	NA	F1C5D1	Cronobacter_phage	45.7	7.1e-19
VEJ54276.1|1066153_1066579_+	Phage-related lysozyme (muraminidase)	NA	A0A0M4R365	Salmonella_phage	57.0	3.1e-33
VEJ54277.1|1066575_1066977_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54278.1|1067515_1068013_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54279.1|1068017_1069100_+	Protein of uncharacterised function (DUF3383)	NA	E5AGB4	Erwinia_phage	44.8	4.2e-95
VEJ54281.1|1069117_1069555_+	Protein of uncharacterised function (DUF3277)	NA	E5AGB5	Erwinia_phage	51.4	7.2e-38
VEJ54282.1|1069668_1070085_+	Uncharacterised protein	NA	I3PGV1	Xanthomonas_phage	37.0	3.7e-15
VEJ54283.1|1070150_1070282_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54285.1|1070278_1072063_+	Phage-related protein	NA	NA	NA	NA	NA
VEJ54286.1|1072062_1072731_+	Uncharacterised protein	NA	E5AGB8	Erwinia_phage	33.0	4.2e-21
VEJ54287.1|1072772_1073093_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54288.1|1073139_1074105_+	Uncharacterised protein	NA	E5AGC0	Erwinia_phage	40.9	3.7e-58
VEJ54289.1|1074091_1074757_+	Mu-like prophage protein gp45	NA	I3PGV6	Xanthomonas_phage	43.4	1.4e-37
VEJ54291.1|1074753_1075107_+	Uncharacterised protein	NA	I3PGV7	Xanthomonas_phage	55.8	1.7e-29
VEJ54292.1|1075106_1076528_+	Uncharacterized homolog of phage Mu protein gp47	NA	E5AGC3	Erwinia_phage	36.2	1.5e-68
VEJ54293.1|1076524_1077268_+	Protein of uncharacterised function (DUF2612)	NA	A0A142IEZ9	Pseudomonas_phage	27.2	3.6e-05
VEJ54294.1|1077264_1077933_+	Phage Tail Collar Domain	NA	K7P7Q7	Enterobacteria_phage	59.6	2.7e-44
VEJ54296.1|1077932_1078523_+|tail	Bacteriophage tail assembly protein	tail	E5G6P1	Salmonella_phage	37.8	7.8e-27
VEJ54297.1|1078649_1079408_+|tail	Phage tail fibre repeat	tail	NA	NA	NA	NA
VEJ54298.1|1079416_1079842_+|tail	Caudovirales tail fibre assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	35.7	7.8e-21
VEJ54299.1|1079924_1080032_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54301.1|1080602_1081166_+	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	70.2	6.9e-65
VEJ54302.1|1081333_1082230_+|tail	Phage tail fibre repeat	tail	A0A2K9VKP4	Shigella_phage	41.4	2.0e-26
>prophage 2
LR134531	Pragia fontium strain NCTC12284 genome assembly, chromosome: 1	4038704	1326529	1345327	4038704	tRNA	Salmonella_phage(19.05%)	31	NA	NA
VEJ54573.1|1326529_1327921_+|tRNA	Cysteine--tRNA ligase	tRNA	F1C984	Moumouvirus	34.7	3.6e-46
VEJ54574.1|1327991_1328852_-	Bifunctional protein FolD	NA	A0A249XZQ2	Enterococcus_phage	33.7	1.9e-29
VEJ54575.1|1329303_1330461_-	site-specific tyrosine recombinase XerC	NA	A0A0M4R586	Salmonella_phage	77.7	8.9e-176
VEJ54576.1|1330846_1331056_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54578.1|1331052_1331592_-	phage N-6-adenine-methyltransferase	NA	A0A1W6JP96	Morganella_phage	48.3	3.3e-40
VEJ54579.1|1331588_1331828_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54580.1|1331842_1332139_-	Uncharacterised protein	NA	K7ZPX9	Xanthomonas_citri_phage	55.3	2.0e-23
VEJ54581.1|1332193_1332475_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54582.1|1332529_1332757_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	59.1	3.4e-15
VEJ54584.1|1333036_1334179_-	Uncharacterised protein	NA	A0A059VA49	Pseudomonas_phage	48.5	3.5e-84
VEJ54585.1|1334162_1334489_-	Protein of uncharacterised function (DUF1317)	NA	A0A0N7CHV0	Escherichia_phage	45.8	2.7e-05
VEJ54586.1|1334498_1335086_-	Uncharacterised protein	NA	A0A0M4RD07	Salmonella_phage	74.8	2.3e-55
VEJ54587.1|1335085_1335907_-	Exodeoxyribonuclease 8	NA	A0A0M5M5Y6	Salmonella_phage	68.9	6.2e-107
VEJ54588.1|1335906_1336203_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54590.1|1336453_1336726_-	Uncharacterised protein	NA	D9ICH9	Escherichia_virus	52.3	4.4e-17
VEJ54591.1|1336917_1337130_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54593.1|1337546_1338179_-	Uncharacterized HTH-type transcriptional regulator CBU_1416	NA	K7PM82	Enterobacteria_phage	64.2	2.4e-50
VEJ54594.1|1338271_1338499_+	Uncharacterized protein conserved in bacteria, prophage-related	NA	NA	NA	NA	NA
VEJ54595.1|1338558_1339014_+	Uncharacterised protein	NA	K7PJS5	Enterobacterial_phage	44.8	7.6e-30
VEJ54596.1|1339015_1339282_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54597.1|1339302_1339455_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54599.1|1339447_1340305_+	phage replication protein O, N-terminal domain	NA	K7PL20	Enterobacteria_phage	60.5	9.1e-93
VEJ54600.1|1340416_1342303_+	DNA primase (bacterial type)	NA	Q5G8S8	Enterobacteria_phage	71.9	1.2e-275
VEJ54602.1|1342302_1342746_+	Uncharacterised protein	NA	I6PD71	Cronobacter_phage	55.5	2.4e-44
VEJ54603.1|1342746_1343001_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54604.1|1342993_1343287_+	82 prophage-derived uncharacterized protein ybcO	NA	E5AGG0	Erwinia_phage	81.2	4.2e-42
VEJ54605.1|1343283_1343640_+	Crossover junction endodeoxyribonuclease rusA	NA	A0A2H4J472	uncultured_Caudovirales_phage	68.6	2.9e-37
VEJ54607.1|1343639_1343843_+	Phage NinH protein	NA	NA	NA	NA	NA
VEJ54608.1|1343839_1344343_+	Phage antitermination protein Q	NA	H6WZJ5	Escherichia_phage	65.4	3.4e-55
VEJ54609.1|1344624_1344942_+	Uncharacterised protein	NA	F1C5D1	Cronobacter_phage	53.9	3.1e-22
VEJ54610.1|1344934_1345327_+	Uncharacterised protein	NA	E7C9S9	Salmonella_phage	62.3	4.2e-37
>prophage 3
LR134531	Pragia fontium strain NCTC12284 genome assembly, chromosome: 1	4038704	1349048	1369172	4038704	tail	Cronobacter_phage(28.57%)	28	NA	NA
VEJ54617.1|1349048_1349615_+	Terminase small subunit	NA	G0ZND3	Cronobacter_phage	62.7	6.5e-55
VEJ54619.1|1349611_1351174_+	Terminase-like family	NA	G8C7P3	Escherichia_phage	84.0	5.2e-272
VEJ54620.1|1351173_1352562_+	Uncharacterised protein	NA	A0A1B0VMH0	Pseudomonas_phage	53.7	6.1e-139
VEJ54621.1|1352563_1353676_+	Uncharacterised protein	NA	I6PD76	Cronobacter_phage	57.1	1.9e-119
VEJ54622.1|1353672_1353828_+	GnsA/GnsB family	NA	NA	NA	NA	NA
VEJ54624.1|1353939_1354716_+	Uncharacterised protein	NA	A0A1B0VMG1	Pseudomonas_phage	60.4	7.0e-68
VEJ54625.1|1354729_1355938_+	Bacterial Ig-like domain (group 2)	NA	A0A1B0VMF8	Pseudomonas_phage	79.1	3.6e-143
VEJ54626.1|1355983_1356466_+	Uncharacterised protein	NA	G8C7P9	Escherichia_phage	44.1	5.9e-25
VEJ54627.1|1356465_1356816_+	Uncharacterised protein	NA	I6PD77	Cronobacter_phage	53.0	3.2e-28
VEJ54629.1|1356817_1357411_+	Uncharacterised protein	NA	G8C7Q1	Escherichia_phage	51.8	1.7e-50
VEJ54630.1|1357407_1357815_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54631.1|1357882_1358542_+|tail	Phage tail protein	tail	I6PBN6	Cronobacter_phage	51.2	5.2e-56
VEJ54632.1|1358625_1358937_+	Domain of uncharacterised function (DUF1789)	NA	I6PDG2	Cronobacter_phage	63.1	5.5e-32
VEJ54633.1|1359101_1359242_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54635.1|1359244_1362211_+|tail	Phage-related minor tail protein	tail	E4WL33	Enterobacteria_phage	39.1	4.2e-145
VEJ54636.1|1362279_1362627_+	Phage-related protein	NA	A0A0S2SYI2	Pseudomonas_phage	45.8	9.9e-22
VEJ54637.1|1362623_1363382_+|tail	phage minor tail protein L	tail	A0A1W6JNX9	Morganella_phage	78.0	1.0e-116
VEJ54638.1|1363384_1364092_+	NlpC/P60 family	NA	K7PGR2	Enterobacteria_phage	72.3	5.5e-104
VEJ54639.1|1364272_1364803_+	Uncharacterized phage-encoded protein	NA	Q38450	Enterobacteria_phage	64.7	2.5e-61
VEJ54641.1|1364860_1365205_-	Arc-like DNA binding domain	NA	NA	NA	NA	NA
VEJ54642.1|1365333_1365507_+	Uncharacterised protein	NA	G9L6D7	Escherichia_phage	62.3	3.0e-11
VEJ54643.1|1365490_1366360_+	P22_AR N-terminal domain	NA	A5VW58	Enterobacteria_phage	68.0	1.2e-44
VEJ54644.1|1366356_1366539_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54645.1|1366669_1366948_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54647.1|1367069_1367639_+	Uncharacterised protein	NA	I6PDJ9	Cronobacter_phage	53.4	1.2e-16
VEJ54648.1|1367668_1368079_+	Uncharacterised protein	NA	K7PLY8	Enterobacterial_phage	56.6	5.8e-37
VEJ54649.1|1368123_1368522_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ54650.1|1368581_1369172_+|tail	Phage-related protein, tail component	tail	K7PHE5	Enterobacteria_phage	79.1	5.3e-84
>prophage 4
LR134531	Pragia fontium strain NCTC12284 genome assembly, chromosome: 1	4038704	2413794	2423607	4038704		Bacillus_phage(33.33%)	9	NA	NA
VEJ55807.1|2413794_2415138_-	UDP-glucose 6-dehydrogenase tuaD	NA	A0A127AXI2	Bacillus_phage	37.6	1.8e-79
VEJ55808.1|2415164_2416019_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	45.5	5.2e-56
VEJ55809.1|2416316_2417327_-	response regulator of RpoS	NA	Q56AR1	Bacillus_thuringiensis_phage	32.5	9.9e-06
VEJ55810.1|2417530_2417989_+	SWIM/SEC-C metal-binding motif protein, PBPRA1643 family	NA	NA	NA	NA	NA
VEJ55811.1|2418105_2418939_+	Formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	41.5	5.0e-11
VEJ55812.1|2419715_2420288_+	LOG family protein yvdD	NA	A0A1V0S9E9	Catovirus	24.6	5.4e-09
VEJ55813.1|2420401_2421208_+	Exodeoxyribonuclease III	NA	NA	NA	NA	NA
VEJ55814.1|2421267_2421669_+	CTP pyrophosphohydrolase	NA	NA	NA	NA	NA
VEJ55815.1|2421675_2423607_-	DNA topoisomerase 3	NA	A0A1X9I6W8	Streptococcus_phage	31.2	4.8e-41
>prophage 5
LR134531	Pragia fontium strain NCTC12284 genome assembly, chromosome: 1	4038704	2764750	2786211	4038704	plate,tail	Haemophilus_phage(57.89%)	22	NA	NA
VEJ56098.1|2764750_2766217_-	Uncharacterised protein	NA	Q7Y5S2	Haemophilus_phage	45.4	3.4e-23
VEJ56099.1|2766354_2767827_-	Uncharacterised protein	NA	Q7Y5S2	Haemophilus_phage	55.6	4.3e-26
VEJ56100.1|2767917_2768271_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ56101.1|2768270_2770037_-	Uncharacterised protein	NA	Q7Y5S2	Haemophilus_phage	45.4	2.2e-24
VEJ56102.1|2770252_2771887_-	Uncharacterised protein	NA	Q7Y5S2	Haemophilus_phage	45.4	2.0e-24
VEJ56103.1|2771972_2772563_-|tail	Bacteriophage tail assembly protein	tail	Q9MCR5	Enterobacteria_phage	35.2	9.8e-30
VEJ56104.1|2772562_2773819_-	Phage Tail Collar Domain	NA	K7P7Q7	Enterobacteria_phage	50.6	3.7e-34
VEJ56105.1|2773815_2774469_-	Protein of uncharacterised function (DUF2612)	NA	D0UIH4	Aggregatibacter_phage	50.5	9.8e-47
VEJ56106.1|2774465_2775611_-	Uncharacterized homolog of phage Mu protein gp47	NA	D0UIH5	Aggregatibacter_phage	52.6	7.3e-106
VEJ56107.1|2775644_2775992_-	Uncharacterised protein	NA	Q7Y5S5	Haemophilus_phage	54.1	9.2e-28
VEJ56108.1|2775981_2776692_-|plate	phage baseplate assembly protein V	plate	D0UIH7	Aggregatibacter_phage	39.6	1.3e-36
VEJ56109.1|2776684_2777506_-	Uncharacterised protein	NA	Q7Y5S8	Haemophilus_phage	48.7	6.9e-74
VEJ56110.1|2777492_2777819_-	Uncharacterised protein	NA	D0UII0	Aggregatibacter_phage	44.6	1.6e-18
VEJ56111.1|2777838_2778612_-	Uncharacterised protein	NA	Q7Y5T0	Haemophilus_phage	39.4	2.0e-30
VEJ56112.1|2778615_2780469_-	Phage-related protein	NA	Q7Y5T2	Haemophilus_phage	27.2	7.7e-12
VEJ56113.1|2780629_2781019_-	Protein of uncharacterised function (DUF2669)	NA	Q776V6	Haemophilus_phage	42.4	1.8e-24
VEJ56114.1|2781018_2781450_-	Uncharacterised protein	NA	Q7Y5T4	Haemophilus_phage	60.3	4.1e-41
VEJ56115.1|2781517_2783023_-	Protein of uncharacterised function (DUF3383)	NA	Q7Y5T5	Haemophilus_phage	49.6	4.4e-135
VEJ56116.1|2783036_2783558_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ56117.1|2783915_2784269_-	Phage antitermination protein Q	NA	NA	NA	NA	NA
VEJ56118.1|2784417_2785116_+	Peptidase S24-like	NA	M9NZE3	Enterobacteria_phage	39.1	4.9e-36
VEJ56119.1|2785446_2786211_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.0	1.4e-39
