assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900638535.1_57792_C02	LR134521	Rothia dentocariosa strain NCTC10918 genome assembly, chromosome: 1	2	494914-500778	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh	cas3,csa3,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,csb3,csb2gr5,csb1gr7	Type I-E	ATGTTCCCCGCACCCGCGGGGATGAGCCC,ATGTTCCCCGCACCCGCGGGGATGAGCCCN,ATGTTCCCCGCACCCGCGGG	29,30,20	0	0	NA	NA	I-E:I-E:NA	96,96,93	96	TypeI-E	cas3,csa3,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,csb3,csb2gr5,csb1gr7	NA,NA|256aa|down_0|LR134521.1_501131_501899_-,NA|256aa|down_1|LR134521.1_502029_502797_-	cas8e|138aa|up_9|LR134521.1_488582_488996_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas8e|310aa|up_8|LR134521.1_489013_489943_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	NA|94aa|up_7|LR134521.1_490014_490296_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|208aa|up_6|LR134521.1_490288_490912_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|378aa|up_5|LR134521.1_490929_492063_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|235aa|up_4|LR134521.1_492065_492770_+	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas6e|222aa|up_3|LR134521.1_492766_493432_+	pfam08798, CRISPR_assoc, CRISPR associated protein	NA|52aa|up_2|LR134521.1_493540_493696_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas1|228aa|up_1|LR134521.1_493794_494478_+	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas2|116aa|up_0|LR134521.1_494477_494825_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|256aa|down_0|LR134521.1_501131_501899_-	NA	NA|256aa|down_1|LR134521.1_502029_502797_-	NA	NA|175aa|down_2|LR134521.1_502931_503456_-	pfam01625, PMSR, Peptide methionine sulfoxide reductase	NA|297aa|down_3|LR134521.1_503590_504481_+	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3)	NA|253aa|down_4|LR134521.1_504662_505421_-	pfam00395, SLH, S-layer homology domain	NA|262aa|down_5|LR134521.1_505692_506478_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|191aa|down_6|LR134521.1_507018_507591_-	PRK00150, def, peptide deformylase; Reviewed	NA|387aa|down_7|LR134521.1_507652_508813_-	cd01160, LCAD, Long chain acyl-CoA dehydrogenase	NA|221aa|down_8|LR134521.1_509116_509779_-	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|302aa|down_9|LR134521.1_510163_511069_+	pfam07510, DUF1524, Protein of unknown function (DUF1524)
GCA_900638535.1_57792_C02	LR134521	Rothia dentocariosa strain NCTC10918 genome assembly, chromosome: 1	3	875261-876769	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csb3,cas3,csb2gr5,csb1gr7	cas3,csa3,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,csb3,csb2gr5,csb1gr7	Unclear	CCCTCAATGAAAGTCACCCATTTTCATGGGTGAGAC,CCCTCAATGNAAAGTCACCCATTTTCATGGGTGAGAC,CCCTCAATGAAAGTCACCCATTTTCATGGGTGAGAC	36,37,36	0	0	NA	NA	NA:NA:NA	20,20,19	20	Unclear	cas3,csa3,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,csb3,csb2gr5,csb1gr7	NA|279aa|up_2|LR134521.1_872907_873744_-,NA	NA|163aa|up_9|LR134521.1_865726_866215_-	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional	NA|850aa|up_8|LR134521.1_866666_869216_+	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type	NA|162aa|up_7|LR134521.1_869380_869866_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|152aa|up_6|LR134521.1_869990_870446_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|335aa|up_5|LR134521.1_870506_871511_+	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|281aa|up_4|LR134521.1_871512_872355_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|156aa|up_3|LR134521.1_872443_872911_-	cd14771, TrHb2_Mt-trHbO-like_O, Truncated hemoglobins, group 2 (O); Mycobacterium tuberculosis hemoglobin O like	NA|279aa|up_2|LR134521.1_872907_873744_-	NA	NA|299aa|up_1|LR134521.1_873817_874714_+	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism]	NA|98aa|up_0|LR134521.1_874907_875201_+	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	cas2|101aa|down_0|LR134521.1_876961_877264_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|535aa|down_1|LR134521.1_877260_878865_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	csb3|355aa|down_2|LR134521.1_878861_879926_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|924aa|down_3|LR134521.1_879925_882697_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|203aa|down_4|LR134521.1_882686_883295_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	csb2gr5|312aa|down_5|LR134521.1_883321_884257_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	csb1gr7|413aa|down_6|LR134521.1_884256_885495_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	NA|286aa|down_7|LR134521.1_886279_887137_-	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|268aa|down_8|LR134521.1_887154_887958_-	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|150aa|down_9|LR134521.1_888165_888615_-	pfam07336, ABATE, Putative stress-induced transcription regulator
GCA_900638535.1_57792_C02	LR134521	Rothia dentocariosa strain NCTC10918 genome assembly, chromosome: 1	4	885762-886020	4,3	CRISPRCasFinder,PILER-CR	no	cas2,cas1,csb3,cas3,csb2gr5,csb1gr7	cas3,csa3,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,csb3,csb2gr5,csb1gr7	Unclear	TCCCTCAATGAAAGTCACCCACTTTCATGGGTGAGAC,TCCCTCAATGAAAGTCACCCACTTTCATGGGTGAGAC	37,37	0	0	NA	NA	NA:NA	3,2	3	Unclear	cas3,csa3,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,csb3,csb2gr5,csb1gr7	NA|279aa|up_9|LR134521.1_872907_873744_-,NA|213aa|down_5|LR134521.1_889975_890614_+	NA|279aa|up_9|LR134521.1_872907_873744_-	NA	NA|299aa|up_8|LR134521.1_873817_874714_+	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism]	NA|98aa|up_7|LR134521.1_874907_875201_+	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	cas2|101aa|up_6|LR134521.1_876961_877264_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|535aa|up_5|LR134521.1_877260_878865_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	csb3|355aa|up_4|LR134521.1_878861_879926_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|924aa|up_3|LR134521.1_879925_882697_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|203aa|up_2|LR134521.1_882686_883295_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	csb2gr5|312aa|up_1|LR134521.1_883321_884257_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	csb1gr7|413aa|up_0|LR134521.1_884256_885495_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	NA|286aa|down_0|LR134521.1_886279_887137_-	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|268aa|down_1|LR134521.1_887154_887958_-	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|150aa|down_2|LR134521.1_888165_888615_-	pfam07336, ABATE, Putative stress-induced transcription regulator	NA|217aa|down_3|LR134521.1_888797_889448_+	pfam12706, Lactamase_B_2, Beta-lactamase superfamily domain	NA|138aa|down_4|LR134521.1_889546_889960_+	PRK10250, PRK10250, MmcQ/YjbR family DNA-binding protein	NA|213aa|down_5|LR134521.1_889975_890614_+	NA	NA|234aa|down_6|LR134521.1_890667_891369_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|61aa|down_7|LR134521.1_891365_891548_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|213aa|down_8|LR134521.1_891551_892190_-	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|81aa|down_9|LR134521.1_892380_892623_-	PRK02821, PRK02821, RNA-binding protein
