The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	441460	448150	2325526		Staphylococcus_phage(50.0%)	7	NA	NA
VEJ16322.1|441460_442600_+	riboflavin biosynthesis protein	NA	A0A1V0SE20	Indivirus	33.3	8.8e-51
VEJ16323.1|442723_443371_+	riboflavin synthase subunit alpha	NA	A0A2H4PQS5	Staphylococcus_phage	43.7	3.1e-45
VEJ16324.1|443431_444637_+	riboflavin biosynthesis protein ribA	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	1.8e-107
VEJ16325.1|444747_445209_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.8	3.0e-42
VEJ16326.1|445297_445786_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
VEJ16327.1|445795_446731_-	phosphosugar isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	33.5	2.4e-38
VEJ16328.1|446857_448150_-	aminopeptidase B	NA	Q6GYZ8	Mycoplasma_phage	34.4	2.8e-29
>prophage 2
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	494130	580301	2325526	protease,capsid,tail,holin	Mannheimia_phage(40.54%)	82	NA	NA
VEJ16373.1|494130_495147_-	tyrosine recombinase xerD	NA	G8C7S0	Escherichia_phage	35.8	1.5e-57
VEJ16374.1|495376_496234_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16375.1|496283_496511_-	Protein of uncharacterised function (DUF551)	NA	NA	NA	NA	NA
VEJ16376.1|496503_496974_-	Uncharacterized protein conserved in bacteria	NA	S5M9Z4	Pseudoalteromonas_phage	53.9	9.5e-36
VEJ16377.1|497106_497562_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16378.1|497596_498319_-	Uncharacterised protein	NA	D0UIN3	Aggregatibacter_phage	34.2	2.5e-27
VEJ16379.1|498320_498563_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16380.1|498860_499763_-	recombination associated protein	NA	A0A2I7RNT5	Vibrio_phage	41.0	1.5e-58
VEJ16381.1|499772_500432_-	Uncharacterised protein	NA	A0A0M3LPL3	Mannheimia_phage	72.1	6.4e-30
VEJ16382.1|500481_500682_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16383.1|500685_501375_-	YqaJ-like viral recombinase domain	NA	A0A0M3LP90	Mannheimia_phage	67.4	1.5e-82
VEJ16384.1|501358_502303_-	phage recombinase	NA	A0A0M3LNU3	Mannheimia_phage	78.9	1.9e-131
VEJ16385.1|502306_502786_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16386.1|502789_503020_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16387.1|503298_503490_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16388.1|503999_504227_-	Uncharacterised protein	NA	A0A0M3LQL0	Mannheimia_phage	64.0	1.1e-21
VEJ16389.1|504511_504661_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16390.1|504746_505562_-	Protein of uncharacterised function (DUF3037)	NA	NA	NA	NA	NA
VEJ16391.1|505558_506263_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16392.1|506342_507020_-	LexA repressor	NA	G9L676	Escherichia_phage	41.6	1.5e-37
VEJ16393.1|507186_507354_+	HTH-type transcriptional regulator	NA	A0A0M4RTV8	Salmonella_phage	72.0	2.1e-14
VEJ16394.1|507408_508158_+	antirepressor protein 1	NA	D0UIL6	Aggregatibacter_phage	60.0	2.8e-37
VEJ16395.1|508154_508925_+	Uncharacterised protein	NA	A0A0M3LS90	Mannheimia_phage	97.3	9.4e-57
VEJ16396.1|508924_509581_+	Replication protein P	NA	A0A0M3LS65	Mannheimia_phage	73.9	6.7e-80
VEJ16397.1|509577_510135_+	DNA methylase	NA	A0A0M3LNW2	Mannheimia_phage	53.2	3.7e-47
VEJ16398.1|510124_510313_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16399.1|510296_511253_+	type I restriction enzyme EcoR124II M protein	NA	A0A0M3LQ47	Mannheimia_phage	64.6	2.7e-109
VEJ16400.1|511249_511699_+	Protein of uncharacterised function (DUF1367)	NA	A0A0M3LR84	Mannheimia_phage	67.1	5.7e-54
VEJ16401.1|512119_512389_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16402.1|512375_512954_+	protein ninG	NA	A0A0M3LTG3	Mannheimia_phage	75.5	6.6e-79
VEJ16403.1|512957_513443_+	Phage antitermination protein Q	NA	A0A0M3LPW4	Mannheimia_phage	53.5	1.6e-41
VEJ16404.1|513708_514083_+|holin	phage holin	holin	A0A0M3ULK9	Salmonella_phage	39.8	1.5e-12
VEJ16405.1|514084_514702_+	chitinase	NA	Q7Y5V0	Haemophilus_phage	55.2	7.5e-57
VEJ16406.1|514703_515069_+	Protein of uncharacterised function (DUF2570)	NA	NA	NA	NA	NA
VEJ16407.1|515556_516033_+	Protein of uncharacterised function (DUF1441)	NA	K7PJY2	Enterobacterial_phage	54.3	3.5e-38
VEJ16408.1|516035_518165_+|tail	bacteriophage tail assembly protein	tail	K7PH52	Enterobacterial_phage	66.5	6.5e-273
VEJ16409.1|518161_518380_+	Uncharacterised protein	NA	A5LH28	Enterobacteria_phage	58.5	5.8e-12
VEJ16410.1|518382_519900_+|capsid	bacteriophage capsid protein	capsid	K7PHM5	Enterobacterial_phage	57.9	2.4e-157
VEJ16411.1|519847_521908_+|protease	atp-dependent clp protease proteolytic subunit	protease	A0A1W6JT88	Pseudomonas_phage	50.9	1.1e-181
VEJ16412.1|521955_522282_+	Uncharacterized conserved protein	NA	A0A291AWX2	Escherichia_phage	41.7	4.4e-16
VEJ16413.1|522274_522583_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16414.1|522585_523110_+|tail	phage tail component	tail	A5LH33	Enterobacteria_phage	38.7	1.3e-20
VEJ16415.1|523106_523538_+|tail	putative tail component of prophage CP-933K	tail	NA	NA	NA	NA
VEJ16416.1|523530_524187_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16417.1|524243_524651_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16418.1|524695_524944_+	phage protein	NA	NA	NA	NA	NA
VEJ16419.1|524940_528393_+|tail	putative tail protein	tail	B7SE05	Pseudomonas_virus	43.6	2.0e-50
VEJ16420.1|528403_528727_+|tail	putative phage minor tail protein	tail	H6WRV8	Salmonella_phage	34.3	5.8e-08
VEJ16421.1|528726_529440_+|tail	Phage-related minor tail protein L	tail	A0A0M3LPR8	Mannheimia_phage	62.6	2.4e-83
VEJ16422.1|529443_530190_+|tail	tail assembly protein	tail	A0A0M3LQI5	Mannheimia_phage	60.3	5.7e-83
VEJ16423.1|530132_530771_+|tail	tail assembly protein I	tail	A0A0M3LQ39	Mannheimia_phage	64.8	9.2e-66
VEJ16424.1|530817_536865_+|tail	phage tail protein	tail	A0A0M3LQ61	Mannheimia_phage	40.8	1.2e-292
VEJ16425.1|536885_537047_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16426.1|537100_537442_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16427.1|537898_538129_-	lipoprotein	NA	NA	NA	NA	NA
VEJ16428.1|538243_539326_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
VEJ16429.1|539449_539845_-	methionine sulfoxide reductase B	NA	NA	NA	NA	NA
VEJ16430.1|540067_541072_+	glyceraldehyde 3-phosphate dehydrogenase	NA	NA	NA	NA	NA
VEJ16431.1|541267_542320_+	rod shape-determining protein MreB	NA	F2Y0P3	Organic_Lake_phycodnavirus	23.1	1.0e-05
VEJ16432.1|542436_543486_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
VEJ16433.1|543485_543974_+	rod shape-determining protein	NA	NA	NA	NA	NA
VEJ16434.1|543986_545327_+	recombination factor protein RarA	NA	G3MBE0	Bacillus_virus	41.5	3.0e-82
VEJ16435.1|545407_546193_+	high-affinity zinc uptake system membrane protein	NA	NA	NA	NA	NA
VEJ16436.1|546372_547170_+	putative glutamine amidotransferase	NA	NA	NA	NA	NA
VEJ16437.1|547249_548326_-	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
VEJ16438.1|548617_549307_+	SanA protein	NA	NA	NA	NA	NA
VEJ16439.1|549563_560216_+	autotransporter adhesin	NA	NA	NA	NA	NA
VEJ16440.1|560175_560937_+	autotransporter adhesin	NA	NA	NA	NA	NA
VEJ16441.1|561207_561906_-	Lactate utilization protein C	NA	NA	NA	NA	NA
VEJ16442.1|562034_563444_-	iron-sulfur electron transport protein	NA	NA	NA	NA	NA
VEJ16443.1|563453_564179_-	dehydrogenase	NA	NA	NA	NA	NA
VEJ16444.1|564348_565944_-	L-lactate permease	NA	NA	NA	NA	NA
VEJ16445.1|566411_566819_-	DNA-binding protein H-NS	NA	NA	NA	NA	NA
VEJ16446.1|567376_568894_+	Na+/H+ antiporter	NA	NA	NA	NA	NA
VEJ16447.1|569098_570070_+	D-galactose transport system substrate-binding protein	NA	NA	NA	NA	NA
VEJ16448.1|570204_571077_-	succinyl-CoA synthetase alpha chain	NA	NA	NA	NA	NA
VEJ16449.1|571079_572246_-	succinyl-CoA synthetase subunit beta	NA	NA	NA	NA	NA
VEJ16450.1|572389_573256_-	Protein of uncharacterised function (DUF535)	NA	NA	NA	NA	NA
VEJ16451.1|573398_574628_-	dihydrolipoamide succinyltransferase	NA	NA	NA	NA	NA
VEJ16452.1|574747_577558_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
VEJ16453.1|577800_578601_-	zinc ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	35.9	5.3e-18
VEJ16454.1|578735_580301_+|protease	putative metalloprotease	protease	Q8SBN9	Clostridium_phage	47.9	8.7e-17
>prophage 3
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	740940	749207	2325526	tRNA	Bacillus_phage(66.67%)	8	NA	NA
VEJ16601.1|740940_741240_-	nicotinate phosphoribosyltransferase	NA	A0A218KC49	Bacillus_phage	54.3	3.3e-18
VEJ16602.1|741282_741552_-	nicotinate phosphoribosyltransferase	NA	A0A218KC49	Bacillus_phage	57.5	9.0e-23
VEJ16603.1|741817_742894_-	outer membrane protein P2-like protein	NA	NA	NA	NA	NA
VEJ16604.1|743363_743885_+	Primosomal replication protein N''	NA	NA	NA	NA	NA
VEJ16605.1|743916_744804_-	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	47.3	1.4e-59
VEJ16606.1|744916_746275_-	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	26.9	4.4e-33
VEJ16607.1|746309_746504_-	carbon storage regulator	NA	A0A2I7RT00	Vibrio_phage	62.7	3.3e-11
VEJ16608.1|746582_749207_-|tRNA	alanyl-tRNA synthetase	tRNA	A0A2K9L1X7	Tupanvirus	38.1	5.5e-80
>prophage 4
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	1043455	1089390	2325526	transposase,tRNA	Bacillus_phage(13.33%)	49	NA	NA
VEJ16857.1|1043455_1044244_-|tRNA	tRNA pseudouridine synthase A	tRNA	NA	NA	NA	NA
VEJ16858.1|1044322_1044979_-	GTP cyclohydrolase I	NA	I6XC45	Vibriophage	51.7	2.7e-52
VEJ16859.1|1045079_1045784_+	3-deoxy-D-manno-octulosonic-acid kinase	NA	NA	NA	NA	NA
VEJ16860.1|1045863_1046271_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEJ16861.1|1046260_1046833_-	acetyltransferase	NA	NA	NA	NA	NA
VEJ16862.1|1047069_1047579_+|transposase	transposase and inactivated derivative	transposase	NA	NA	NA	NA
VEJ16863.1|1047590_1048403_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	47.9	2.2e-64
VEJ16864.1|1048422_1048971_-	alpha/beta fold family hydrolase	NA	NA	NA	NA	NA
VEJ16865.1|1048946_1049312_-	alpha/beta fold family hydrolase	NA	NA	NA	NA	NA
VEJ16866.1|1049350_1049476_-	alpha/beta fold family hydrolase	NA	NA	NA	NA	NA
VEJ16867.1|1049634_1050519_+	putative transcriptional regulator	NA	NA	NA	NA	NA
VEJ16868.1|1050572_1051391_-	outer membrane lipoprotein 2	NA	NA	NA	NA	NA
VEJ16869.1|1051503_1052325_-	outer membrane lipoprotein	NA	NA	NA	NA	NA
VEJ16870.1|1052350_1053028_-	ABC transporter permease	NA	NA	NA	NA	NA
VEJ16871.1|1053017_1054052_-	DL-methionine transporter ATP-binding subunit	NA	G9BWD6	Planktothrix_phage	35.8	2.8e-32
VEJ16872.1|1054249_1055629_-|tRNA	cysteinyl-tRNA synthetase	tRNA	A0A1V0SAQ2	Catovirus	28.1	1.0e-53
VEJ16873.1|1055773_1056283_+	peptidyl-prolyl cis-trans isomerase B	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	38.4	1.7e-14
VEJ16874.1|1056386_1057622_+|tRNA	multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	49.2	2.6e-93
VEJ16875.1|1057693_1058203_+|transposase	transposase and inactivated derivative	transposase	NA	NA	NA	NA
VEJ16876.1|1058214_1059027_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	47.5	1.7e-64
VEJ16877.1|1059072_1061445_-	iron-regulated outer membrane protein	NA	NA	NA	NA	NA
VEJ16878.1|1061606_1062896_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16879.1|1062952_1064368_+	TPR repeat-containing protein NMB0313 precursor	NA	NA	NA	NA	NA
VEJ16880.1|1065392_1065587_-	FeS assembly protein IscX	NA	NA	NA	NA	NA
VEJ16881.1|1065586_1065928_-	ferredoxin	NA	NA	NA	NA	NA
VEJ16882.1|1066048_1067902_-	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.9	1.6e-110
VEJ16883.1|1067986_1068619_-	Protein of uncharacterised function DUF2625	NA	NA	NA	NA	NA
VEJ16884.1|1068646_1069099_-	orotate transporter	NA	NA	NA	NA	NA
VEJ16885.1|1069146_1069668_-	co-chaperone HscB	NA	NA	NA	NA	NA
VEJ16886.1|1069677_1070001_-	iron-binding protein	NA	A0A2H4N7N5	Lake_Baikal_phage	48.6	3.4e-24
VEJ16887.1|1070142_1070526_-	scaffold protein	NA	A0A218MKD1	uncultured_virus	74.2	5.0e-51
VEJ16888.1|1070659_1071886_-	cysteine desulfurase	NA	A0A1X7C038	Faustovirus	29.6	1.3e-28
VEJ16889.1|1071939_1072392_-	putative HTH-type transcriptional regulator	NA	NA	NA	NA	NA
VEJ16890.1|1072881_1074273_+	outer membrane protein P1	NA	NA	NA	NA	NA
VEJ16891.1|1074358_1074922_+	methylated-DNA--protein-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	48.2	2.0e-32
VEJ16892.1|1074941_1076792_-	sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.2	1.0e-40
VEJ16893.1|1076897_1077761_-	putative integral membrane protein	NA	NA	NA	NA	NA
VEJ16894.1|1077876_1078419_-	Smr domain	NA	NA	NA	NA	NA
VEJ16895.1|1078408_1079053_-	dithiobiotin synthetase	NA	NA	NA	NA	NA
VEJ16896.1|1079052_1079823_-	biotin synthesis protein	NA	NA	NA	NA	NA
VEJ16897.1|1079810_1080470_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEJ16898.1|1080479_1081643_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
VEJ16899.1|1081669_1082968_-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	28.3	1.8e-20
VEJ16900.1|1083058_1084003_+	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase	NA	NA	NA	NA	NA
VEJ16901.1|1084084_1084561_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
VEJ16902.1|1084644_1086087_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
VEJ16903.1|1086123_1086393_-	acetyltransferase	NA	NA	NA	NA	NA
VEJ16904.1|1086711_1087833_-|transposase	transposase	transposase	NA	NA	NA	NA
VEJ16905.1|1088349_1089390_+|transposase	transposase	transposase	A0A0M3LS26	Mannheimia_phage	92.2	3.5e-187
>prophage 5
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	1177339	1212665	2325526	tail	Pseudomonas_phage(58.06%)	44	NA	NA
VEJ16975.1|1177339_1177816_-	Uncharacterised protein	NA	A0A0M5MXL4	Ralstonia_phage	38.0	2.6e-12
VEJ16976.1|1177861_1178023_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16977.1|1178019_1178232_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16978.1|1178228_1178753_-	Mu-like prophage host-nuclease inhibitor protein Gam	NA	F6MIJ0	Haemophilus_phage	49.4	1.4e-40
VEJ16979.1|1178745_1178994_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16980.1|1178986_1180159_-	ABC-type oligopeptide transport system, ATPase component	NA	A4JWN1	Burkholderia_virus	55.3	3.8e-110
VEJ16981.1|1180181_1182014_-	Integrase core domain	NA	J9SGQ3	Pseudomonas_phage	40.1	4.3e-116
VEJ16982.1|1181994_1182981_-	Uncharacterised protein	NA	J9SND0	Pseudomonas_phage	27.4	1.9e-22
VEJ16983.1|1182991_1183294_-	Uncharacterised protein	NA	A0A0S4L7B4	Pseudomonas_phage	44.0	5.6e-13
VEJ16984.1|1183295_1183418_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16985.1|1183518_1183713_-	phage-associated protein, BcepMu gp16 family	NA	NA	NA	NA	NA
VEJ16986.1|1183809_1184262_+	transcriptional regulator, y4mF family	NA	A0A1S5NPU3	Burkholderia_phage	30.8	3.1e-07
VEJ16987.1|1184262_1184682_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16988.1|1184703_1185222_+	RIP homotypic interaction motif	NA	NA	NA	NA	NA
VEJ16989.1|1185257_1186295_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16990.1|1186291_1186747_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16991.1|1186868_1187123_-	Uncharacterised protein	NA	B7SDP6	Haemophilus_phage	51.9	7.4e-19
VEJ16992.1|1187338_1187713_+	Uncharacterised protein	NA	Q6QIC8	Burkholderia_phage	52.2	8.1e-22
VEJ16993.1|1187715_1188324_+	putative transglycosylase	NA	J9SH25	Pseudomonas_phage	61.2	4.2e-60
VEJ16994.1|1188308_1188749_+	Uncharacterised protein	NA	A0A0A7DJP8	Pseudomonas_phage	31.5	2.5e-06
VEJ16995.1|1188851_1189202_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ16996.1|1189203_1189509_+	Uncharacterised protein	NA	Q5ZQY7	Pseudomonas_phage	51.0	5.1e-22
VEJ16997.1|1189518_1190058_+	Protein of uncharacterised function (DUF3486)	NA	A4JWJ3	Burkholderia_virus	52.2	3.1e-46
VEJ16998.1|1190057_1191677_+	Mu-like prophage FluMu protein gp28	NA	Q6QIC1	Burkholderia_phage	64.2	6.8e-182
VEJ16999.1|1191679_1193191_+	Mu-like prophage protein gp29	NA	Q5ZQY4	Pseudomonas_phage	52.4	3.8e-142
VEJ17000.1|1193183_1194434_+	Phage Mu protein F like protein	NA	J9STS2	Pseudomonas_phage	46.6	8.0e-106
VEJ17001.1|1194572_1195415_+	Uncharacterised protein	NA	A0A0S4L2T7	Pseudomonas_phage	61.4	1.2e-94
VEJ17002.1|1195423_1195933_+	Mu-like prophage protein gp36	NA	Q5ZQX5	Pseudomonas_phage	41.8	1.7e-30
VEJ17003.1|1195925_1196378_+	Uncharacterised protein	NA	J9SH57	Pseudomonas_phage	33.3	5.8e-14
VEJ17004.1|1196374_1196632_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17005.1|1196631_1197375_+	Uncharacterised protein	NA	A0A0M4U7A4	Ralstonia_phage	36.9	1.1e-33
VEJ17006.1|1197421_1197829_+	Uncharacterised protein	NA	A0A2D1GNY5	Pseudomonas_phage	37.6	6.3e-20
VEJ17007.1|1198030_1198243_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17008.1|1198254_1201614_+|tail	putative tail protein	tail	A0A2D1GNK1	Pseudomonas_phage	33.6	2.6e-111
VEJ17009.1|1201616_1202615_+	Uncharacterised protein	NA	A0A2D1GMZ0	Marinobacter_phage	28.1	4.7e-24
VEJ17010.1|1202617_1203583_+	Uncharacterised protein	NA	A0A0U2KZ01	Pseudomonas_phage	27.9	1.0e-20
VEJ17011.1|1203585_1205268_+	Uncharacterised protein	NA	L7P7V0	Pseudomonas_phage	36.4	8.6e-87
VEJ17012.1|1205312_1206122_+	Uncharacterized conserved protein	NA	A0A2D1GNT2	Pseudomonas_phage	50.5	2.1e-75
VEJ17013.1|1206139_1206391_+	Uncharacterised protein	NA	A0A2D1GNV4	Pseudomonas_phage	64.5	2.0e-24
VEJ17014.1|1206395_1206599_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17015.1|1206598_1209385_+	Uncharacterised protein	NA	A0A2D1GNP9	Pseudomonas_phage	46.0	2.7e-178
VEJ17016.1|1209567_1210416_+	Site-specific DNA methylase	NA	F6MIM2	Haemophilus_phage	66.2	6.2e-110
VEJ17017.1|1210667_1212311_-	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	67.7	5.5e-187
VEJ17018.1|1212374_1212665_-	co-chaperonin GroES	NA	A0A221S322	uncultured_virus	35.8	2.1e-09
>prophage 6
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	1319463	1328574	2325526		uncultured_Caudovirales_phage(16.67%)	9	NA	NA
VEJ17114.1|1319463_1320096_+	LexA repressor	NA	A0A2H4JG58	uncultured_Caudovirales_phage	48.5	1.2e-09
VEJ17115.1|1320155_1320836_+	DNA mismatch repair protein MutH	NA	NA	NA	NA	NA
VEJ17116.1|1320921_1321653_+	integral membrane protein, YkoY family	NA	A0A0R6PEZ3	Moraxella_phage	48.0	6.2e-42
VEJ17117.1|1321767_1322805_+	beta-hexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	42.9	6.8e-18
VEJ17118.1|1322885_1324061_+	23S rRNA methyluridine methyltransferase	NA	A0A2P1ELP3	Moumouvirus	32.1	3.0e-14
VEJ17119.1|1324267_1325578_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	59.4	1.2e-131
VEJ17120.1|1325653_1326283_+	NUDIX hydrolase	NA	NA	NA	NA	NA
VEJ17121.1|1326296_1326707_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEJ17122.1|1326765_1328574_-	ATP-dependent DNA helicase	NA	A0A1V0SBK0	Catovirus	37.5	6.0e-86
>prophage 7
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	1474115	1529614	2325526	protease,transposase,tRNA	Bacillus_virus(15.38%)	56	NA	NA
VEJ17266.1|1474115_1475972_+|protease	protease IV, signal peptide peptidase	protease	A0A0K2FHL6	Achromobacter_phage	26.1	1.3e-11
VEJ17267.1|1476106_1476874_+	ribonuclease	NA	NA	NA	NA	NA
VEJ17268.1|1476874_1477396_+	SprT-like protein	NA	NA	NA	NA	NA
VEJ17269.1|1477500_1478787_+	NADH dehydrogenase	NA	NA	NA	NA	NA
VEJ17270.1|1478978_1481306_-	transcriptional accessory protein	NA	NA	NA	NA	NA
VEJ17271.1|1481380_1481929_-	putative fimbrial biogenesis and twitching motility protein PilF-like protein	NA	NA	NA	NA	NA
VEJ17272.1|1481982_1483164_-	ribosomal RNA large subunit methyltransferase N	NA	NA	NA	NA	NA
VEJ17273.1|1483941_1485381_+|tRNA	glutamyl-tRNA ligase	tRNA	NA	NA	NA	NA
VEJ17274.1|1485718_1485970_+	antitoxin YefM	NA	NA	NA	NA	NA
VEJ17275.1|1485966_1486227_+	toxin YoeB	NA	NA	NA	NA	NA
VEJ17276.1|1486385_1486553_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17277.1|1486554_1487535_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
VEJ17278.1|1487628_1488888_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	55.5	4.9e-119
VEJ17279.1|1488887_1489478_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	65.2	1.7e-66
VEJ17280.1|1489601_1489994_+	Fe-S metabolism associated SufE	NA	NA	NA	NA	NA
VEJ17281.1|1490352_1491126_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	41.1	1.1e-33
VEJ17282.1|1491212_1492883_-	putative ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	27.4	1.9e-38
VEJ17283.1|1493047_1493386_+	putative gamma-carboxymuconolactone decarboxylase subunit	NA	NA	NA	NA	NA
VEJ17284.1|1493378_1493747_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
VEJ17285.1|1493855_1494176_+	secreted protein	NA	NA	NA	NA	NA
VEJ17286.1|1494233_1495508_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
VEJ17287.1|1495639_1495900_-	transcriptional regulator	NA	NA	NA	NA	NA
VEJ17288.1|1495912_1496266_-	putative anti-sigma factor B antagonist	NA	NA	NA	NA	NA
VEJ17289.1|1496275_1496914_-	organic solvent resistance ABC transporter auxiliary protein	NA	NA	NA	NA	NA
VEJ17290.1|1496991_1497519_-	organic solvent resistance ABC transporter periplasmic protein	NA	NA	NA	NA	NA
VEJ17291.1|1497537_1498314_-	permease	NA	NA	NA	NA	NA
VEJ17292.1|1498306_1499110_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	3.2e-23
VEJ17293.1|1499370_1500765_+|protease	serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	31.5	1.8e-26
VEJ17294.1|1500804_1501692_-	Epimerase family protein SA0724	NA	NA	NA	NA	NA
VEJ17295.1|1501691_1502153_-	arginine repressor	NA	NA	NA	NA	NA
VEJ17296.1|1502346_1503300_+	malate dehydrogenase	NA	NA	NA	NA	NA
VEJ17297.1|1503389_1503659_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17298.1|1503726_1504371_-	adenylate kinase	NA	A0A1B4XWI3	Tenacibaculum_phage	35.8	6.5e-11
VEJ17299.1|1504522_1506646_-	iron-regulated outer membrane protein	NA	NA	NA	NA	NA
VEJ17300.1|1506822_1508103_-	permease and signal transducer	NA	NA	NA	NA	NA
VEJ17301.1|1508241_1509258_-	UDP-glucose-4-epimerase	NA	A0A2K9L1R4	Tupanvirus	48.3	6.1e-88
VEJ17302.1|1509321_1511370_-	NAD-dependent DNA ligase LigA	NA	A0A289ZTZ3	Serratia_phage	45.3	2.8e-124
VEJ17303.1|1511433_1512444_-	cell division protein ZipA	NA	NA	NA	NA	NA
VEJ17304.1|1512563_1513445_+	putative sulfate transport protein CysZ	NA	NA	NA	NA	NA
VEJ17305.1|1513504_1513831_-	secreted protein	NA	NA	NA	NA	NA
VEJ17306.1|1513922_1515377_-	6-phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.0	3.3e-42
VEJ17307.1|1515589_1516204_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17308.1|1516228_1516918_-	RacX protein	NA	NA	NA	NA	NA
VEJ17309.1|1517020_1518340_-	putative transport protein	NA	NA	NA	NA	NA
VEJ17310.1|1518472_1519171_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
VEJ17311.1|1519242_1520730_-	glucose-6-phosphate 1-dehydrogenase	NA	M4SIY3	Cyanophage	38.4	7.1e-85
VEJ17312.1|1520801_1521617_-	3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase	NA	NA	NA	NA	NA
VEJ17313.1|1521629_1522187_-	ADP-ribose diphosphatase NudE	NA	NA	NA	NA	NA
VEJ17314.1|1522329_1522734_+	heat shock-like protein 15	NA	NA	NA	NA	NA
VEJ17315.1|1522864_1523755_+	Hsp33-like chaperonin	NA	NA	NA	NA	NA
VEJ17316.1|1523822_1525157_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
VEJ17317.1|1525386_1525557_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17318.1|1526009_1527014_+	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
VEJ17319.1|1527062_1528010_+	carbamate kinase	NA	NA	NA	NA	NA
VEJ17320.1|1528280_1528790_+|transposase	transposase and inactivated derivative	transposase	NA	NA	NA	NA
VEJ17321.1|1528801_1529614_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	48.3	3.4e-65
>prophage 8
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	1643899	1653625	2325526		Enterobacteria_phage(42.86%)	9	NA	NA
VEJ17421.1|1643899_1645759_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.1	2.2e-35
VEJ17422.1|1645863_1647606_-	DNA primase	NA	A0A1B0WMR3	Flavobacterium_phage	29.5	5.1e-34
VEJ17423.1|1647785_1648001_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
VEJ17424.1|1648121_1648664_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.6	2.4e-54
VEJ17425.1|1648663_1649539_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	38.9	2.6e-42
VEJ17426.1|1649538_1650417_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	65.6	9.3e-109
VEJ17427.1|1650457_1651522_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	55.1	2.2e-104
VEJ17428.1|1651564_1652887_-	putative sugar transferase	NA	NA	NA	NA	NA
VEJ17429.1|1652914_1653625_-	acetyltransferase	NA	A0A2R8FE91	Brazilian_cedratvirus	34.4	3.0e-09
>prophage 9
LR134515	Actinobacillus pleuropneumoniae strain NCTC10976 genome assembly, chromosome: 1	2325526	2163170	2187510	2325526	protease,transposase,tRNA	Bacillus_phage(50.0%)	24	NA	NA
VEJ17915.1|2163170_2166131_-|protease	protease III	protease	A0A1V0SJA4	Klosneuvirus	25.2	1.8e-71
VEJ17916.1|2166127_2169472_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA	NA
VEJ17917.1|2169577_2169874_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17918.1|2169863_2170520_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17919.1|2170529_2171162_-	Type II secretory pathway, component PulJ	NA	NA	NA	NA	NA
VEJ17920.1|2171187_2171718_-	type II secretory pathway, pseudopilin	NA	NA	NA	NA	NA
VEJ17921.1|2171805_2172336_-	3-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA	NA
VEJ17922.1|2172447_2174085_-|protease	lon protease	protease	NA	NA	NA	NA
VEJ17923.1|2174169_2174616_+	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA	NA
VEJ17924.1|2174687_2175716_-|tRNA	tryptophanyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEJ17925.1|2175854_2176520_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
VEJ17926.1|2176613_2177426_-|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	47.5	2.4e-63
VEJ17927.1|2178112_2178343_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ17928.1|2178501_2179296_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
VEJ17929.1|2179348_2180140_-	permease	NA	NA	NA	NA	NA
VEJ17930.1|2180136_2180757_-	dinucleoside polyphosphate hydrolase	NA	NA	NA	NA	NA
VEJ17931.1|2181301_2182069_-|protease	Zn-dependent protease with chaperone function	protease	NA	NA	NA	NA
VEJ17932.1|2182164_2182692_-	inorganic pyrophosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	66.3	4.3e-61
VEJ17933.1|2182765_2183476_+	type 12 methyltransferase	NA	NA	NA	NA	NA
VEJ17934.1|2183522_2184020_-	ribonuclease activity regulator protein RraA	NA	NA	NA	NA	NA
VEJ17935.1|2184238_2185033_+	putative formate-nitrite transporter	NA	NA	NA	NA	NA
VEJ17936.1|2185203_2186028_+	putative esterase	NA	NA	NA	NA	NA
VEJ17937.1|2186176_2186989_-|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	47.5	2.4e-63
VEJ17938.1|2187000_2187510_-|transposase	transposase and inactivated derivative	transposase	NA	NA	NA	NA
