The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134512	Streptococcus agalactiae strain NCTC13949 genome assembly, chromosome: 1	2032876	36473	48538	2032876		Synechococcus_phage(28.57%)	8	NA	NA
VEJ11910.1|36473_40199_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.9	1.9e-38
VEJ11911.1|40432_41887_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
VEJ11912.1|41914_42937_+	phosphoribosylaminoimidazole synthetase	NA	R9TMC7	Synechococcus_phage	42.7	1.1e-63
VEJ11913.1|43104_43653_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.4e-25
VEJ11914.1|43675_44428_+	acetyltransferase, GNAT family	NA	NA	NA	NA	NA
VEJ11915.1|44447_45995_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	Q58MG4	Prochlorococcus_phage	49.2	3.9e-78
VEJ11916.1|46187_47087_+	peptidase, M23/M37 family	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
VEJ11917.1|47233_48538_+	Group B streptococcal surface immunogenic protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	3.7e-05
>prophage 2
LR134512	Streptococcus agalactiae strain NCTC13949 genome assembly, chromosome: 1	2032876	196955	246405	2032876	tRNA,lysis,integrase,holin	Streptococcus_phage(25.0%)	57	213210:213231	231767:231788
VEJ12061.1|196955_197582_+|tRNA	Phenylalanyl-tRNA synthetase domain protein (Bsu YtpR)	tRNA	NA	NA	NA	NA
VEJ12062.1|197635_198352_-	probable S-adenosylmethionine-dependent methyltransferase	NA	NA	NA	NA	NA
VEJ12063.1|198432_198828_+|tRNA	FIG107367: tRNA-binding protein	tRNA	A1EAD1	Streptococcus_phage	50.0	1.9e-29
VEJ12064.1|198951_199596_+	Hydrolase, haloacid dehalogenase-like family	NA	A0A1D8KNV9	Synechococcus_phage	29.2	2.2e-11
VEJ12065.1|199622_201368_+|lysis	Autolysis histidine kinase LytS	lysis	Q9EYF3	Enterobacteria_phage	28.8	1.0e-58
VEJ12066.1|201348_202089_+|lysis	Autolysis response regulater LytR	lysis	NA	NA	NA	NA
VEJ12067.1|202258_202714_+|holin	Antiholin-like protein LrgA	holin	NA	NA	NA	NA
VEJ12068.1|202715_203444_+	LrgA-associated membrane protein LrgB	NA	NA	NA	NA	NA
VEJ12069.1|203686_205315_+	Glutathione-binding protein gsiB	NA	NA	NA	NA	NA
VEJ12070.1|205427_206405_+	oligopeptide ABC transporter (permease)	NA	NA	NA	NA	NA
VEJ12071.1|206401_207223_+	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	NA	NA	NA	NA	NA
VEJ12072.1|207234_208038_+	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	NA	A0A2R8FG22	Brazilian_cedratvirus	26.9	3.2e-07
VEJ12073.1|208021_208648_+	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	NA	G3M9Y6	Bacillus_virus	27.0	2.3e-16
VEJ12074.1|208930_210961_+	PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component/ PTS system, trehalose-specific IIA component	NA	NA	NA	NA	NA
VEJ12075.1|211182_212808_+	Trehalose-6-phosphate hydrolase	NA	NA	NA	NA	NA
VEJ12076.1|213023_215060_+	Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system,mannitol/fructose-specific IIA component	NA	NA	NA	NA	NA
213210:213231	attL	TTATTAGGAGATGAAAAAGAGC	NA	NA	NA	NA
VEJ12077.1|215062_215347_+	PTS system ascorbate-specific transporter subunits IICB	NA	NA	NA	NA	NA
VEJ12078.1|215359_216715_+	Putative integral membrane protein	NA	NA	NA	NA	NA
VEJ12079.1|216717_217575_+	Transketolase, N-terminal section	NA	NA	NA	NA	NA
VEJ12080.1|217571_218501_+	Transketolase, C-terminal section	NA	NA	NA	NA	NA
VEJ12081.1|218528_219869_+	oxidoreductase, putative	NA	NA	NA	NA	NA
VEJ12082.1|219956_220226_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
VEJ12083.1|220606_222736_+	Polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
VEJ12084.1|222737_223490_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12085.1|223498_224083_+	serine acetyltransferase	NA	NA	NA	NA	NA
VEJ12086.1|224092_224275_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12087.1|224271_225615_+|tRNA	Cysteinyl-tRNA synthetase	tRNA	A0A1V0SAQ2	Catovirus	31.2	2.9e-53
VEJ12088.1|225607_225994_+	COG1939: Ribonuclease III family protein	NA	NA	NA	NA	NA
VEJ12089.1|226096_226852_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
VEJ12090.1|226848_227367_+	Predicted RNA-binding protein containing a PIN domain	NA	NA	NA	NA	NA
VEJ12091.1|227459_228320_+|tRNA	DegV family protein in cluster with TrmH family tRNA/rRNA methyltransferase YacO	tRNA	NA	NA	NA	NA
VEJ12092.1|229200_229647_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
VEJ12093.1|229667_230060_+	SSU ribosomal protein S9p (S16e)	NA	NA	NA	NA	NA
VEJ12094.1|230187_231342_-|integrase	site-specific recombinase, phage integrase family	integrase	A0A1S5S7K9	Streptococcus_phage	33.4	6.0e-47
VEJ12095.1|231410_231962_-	DNA-binding protein	NA	NA	NA	NA	NA
231767:231788	attR	GCTCTTTTTCATCTCCTAATAA	NA	NA	NA	NA
VEJ12096.1|232087_232420_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12097.1|232560_232842_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12098.1|232847_233174_+	replication initiation factor	NA	NA	NA	NA	NA
VEJ12099.1|233177_233819_+	Arsenate reductase and related proteins, glutaredoxin family	NA	NA	NA	NA	NA
VEJ12100.1|234130_235006_+	replication initiation factor family protein	NA	NA	NA	NA	NA
VEJ12101.1|235041_235476_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12102.1|235792_237049_+	Mobilization protein MobM	NA	M1NXP9	Cellulophaga_phage	30.8	3.2e-14
VEJ12103.1|237216_237687_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12104.1|237991_238327_-	Toxin to DNA-damage-inducible protein J	NA	NA	NA	NA	NA
VEJ12105.1|238316_238604_-	DNA-damage-inducible protein J	NA	NA	NA	NA	NA
VEJ12106.1|239110_239401_+	virulence factor EsxA	NA	NA	NA	NA	NA
VEJ12107.1|239574_239910_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12108.1|239909_240470_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12109.1|240442_241123_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12110.1|241107_241494_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12111.1|241527_241809_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12112.1|242440_242530_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12113.1|242526_242652_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12114.1|242651_243512_+	Positive transcriptional regulator, MutR family	NA	NA	NA	NA	NA
VEJ12115.1|243584_244766_+	MFS general substrate transporter	NA	NA	NA	NA	NA
VEJ12116.1|244827_245478_-|holin	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	holin	NA	NA	NA	NA
VEJ12117.1|245478_246405_-|holin	Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	holin	NA	NA	NA	NA
>prophage 3
LR134512	Streptococcus agalactiae strain NCTC13949 genome assembly, chromosome: 1	2032876	556118	634095	2032876	protease,head,integrase,capsid,transposase,portal,lysis,terminase,tail	Streptococcus_phage(86.27%)	72	555529:555543	565623:565637
555529:555543	attL	GGCAGGGGACATATT	NA	NA	NA	NA
VEJ12410.1|556118_556385_-|integrase	integrase	integrase	Q77YW7	Streptococcus_phage	65.2	9.2e-20
VEJ12411.1|556561_556789_+	Transposase	NA	NA	NA	NA	NA
VEJ12412.1|556950_557151_+|transposase	ISSth1, transposase (orf2), IS3 family	transposase	NA	NA	NA	NA
VEJ12413.1|557175_557433_+|transposase	IS3 familytransposase orf2	transposase	A0A0C5AEA5	Paenibacillus_phage	43.5	5.8e-11
VEJ12414.1|558843_560121_+	ABC transporter membrane-spanning permease, Pep export, Vex3	NA	NA	NA	NA	NA
VEJ12415.1|560130_560787_+	ABC transporter, ATP-binding protein Vex2	NA	G9BWD6	Planktothrix_phage	31.8	2.2e-22
VEJ12416.1|560786_562163_+	ABC transporter membrane-spanning permease, Pep export, Vex3	NA	NA	NA	NA	NA
VEJ12417.1|562259_562913_+	Two-component response regulator VncR	NA	W8CYM9	Bacillus_phage	33.6	8.1e-25
VEJ12418.1|562909_564211_+	sensor histidine kinase VncS	NA	W8CYF6	Bacillus_phage	25.7	1.7e-05
VEJ12419.1|564262_564874_-	Mobile element protein	NA	Q8W6R2	Burkholderia_virus	27.8	2.9e-16
VEJ12420.1|565087_565267_+	CsbD-like	NA	J7KJ36	Streptococcus_phage	96.4	4.3e-21
VEJ12421.1|565921_567127_+	Cell division protein FtsW	NA	NA	NA	NA	NA
565623:565637	attR	GGCAGGGGACATATT	NA	NA	NA	NA
VEJ12422.1|567245_567806_+	hydrolase, haloacid dehalogenase-like family	NA	NA	NA	NA	NA
VEJ12423.1|567806_569759_+	DNA gyrase subunit B	NA	G3M9Z3	Bacillus_virus	44.8	1.5e-143
VEJ12424.1|569852_571577_+	Septation ring formation regulator EzrA	NA	NA	NA	NA	NA
VEJ12425.1|571670_572312_+	Phosphoserine phosphatase	NA	NA	NA	NA	NA
VEJ12426.1|572332_572818_-	MutT/nudix family protein	NA	NA	NA	NA	NA
VEJ12427.1|572830_573286_-	Uncharacterized conserved protein	NA	W6LLD2	Streptococcus_phage	48.9	7.8e-27
VEJ12428.1|573483_574791_+	Enolase	NA	A0A1X9I5Z8	Streptococcus_phage	95.4	1.5e-235
VEJ12429.1|574898_575963_-	Streptococcal extracellular nuclease 2	NA	NA	NA	NA	NA
VEJ12430.1|576191_577475_+	5-Enolpyruvylshikimate-3-phosphate synthase	NA	NA	NA	NA	NA
VEJ12431.1|577467_577980_+	Shikimate kinase I	NA	NA	NA	NA	NA
VEJ12432.1|578036_579410_+	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F1 (as in PMID19099556)	NA	NA	NA	NA	NA
VEJ12433.1|579510_580866_+	23S rRNA (uracil-5-)-methyltransferase RumA	NA	D0R096	Streptococcus_phage	73.4	2.3e-191
VEJ12434.1|581387_581906_+	DUF1706 domain-containing protein	NA	NA	NA	NA	NA
VEJ12435.1|582208_582739_-	Transcriptional regulator, TetR family	NA	NA	NA	NA	NA
VEJ12436.1|582908_589385_+	Surface protein Rib	NA	NA	NA	NA	NA
VEJ12437.1|589697_590699_+	N-acetyl-L,L-diaminopimelate deacetylase	NA	NA	NA	NA	NA
VEJ12438.1|590718_590916_+	N-acetyl-L,L-diaminopimelate deacetylase	NA	NA	NA	NA	NA
VEJ12439.1|591154_593023_+	Domain of uncharacterised function (DUF955)	NA	E4ZFJ9	Streptococcus_phage	80.9	2.0e-302
VEJ12440.1|593431_594001_+	Uncharacterised protein	NA	A0A1B0RXB3	Streptococcus_phage	81.0	1.1e-86
VEJ12441.1|594039_595995_-	FIG006036: phage encoded DNA polymerase I	NA	D0R0B0	Streptococcus_phage	83.6	0.0e+00
VEJ12442.1|596044_596209_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12443.1|596225_596789_-	Phage protein	NA	A0A1B0RXA9	Streptococcus_phage	93.4	3.3e-91
VEJ12444.1|596793_597915_-	Phage protein	NA	A0A1X9I6D8	Streptococcus_phage	88.5	8.0e-198
VEJ12445.1|597907_598231_-	Uncharacterised protein	NA	A0A1B0RXB7	Streptococcus_phage	71.2	2.0e-32
VEJ12446.1|598205_598340_-	Uncharacterised protein	NA	Q6DMW0	Streptococcus_phage	86.4	2.1e-12
VEJ12447.1|598627_600907_+	DNA primase/helicase, phage-associated	NA	M1NSF0	Streptococcus_phage	80.7	0.0e+00
VEJ12448.1|601257_601539_+	Phage protein	NA	M1PFY8	Streptococcus_phage	82.8	5.5e-39
VEJ12449.1|601519_602896_+	DNA helicase, phage-associated	NA	A0A1X9I6B0	Streptococcus_phage	84.5	5.3e-228
VEJ12450.1|602888_603398_+	uncharacterised phage protein	NA	Q6DMV6	Streptococcus_phage	54.5	1.4e-45
VEJ12451.1|603565_603760_+	Uncharacterised protein	NA	A0A1B0RXC3	Streptococcus_phage	86.7	6.1e-21
VEJ12452.1|603807_604845_+	S-adenosylmethionine synthetase	NA	E4ZFL0	Streptococcus_phage	84.3	8.8e-167
VEJ12453.1|605500_605956_+	zinc-finger protein	NA	A0A1B0RXC6	Streptococcus_phage	51.0	5.4e-44
VEJ12454.1|605927_607184_+	Adenine-specific methyltransferase	NA	E4ZFL4	Streptococcus_phage	88.7	3.7e-220
VEJ12455.1|607180_608434_+	DNA methylase	NA	M1NSK8	Streptococcus_phage	93.5	3.6e-231
VEJ12456.1|608776_609226_+	Uncharacterised protein	NA	E4ZFL7	Streptococcus_phage	63.6	1.8e-15
VEJ12457.1|609277_609751_+|terminase	P27 family phage terminase small subunit	terminase	A0A1X9I6K0	Streptococcus_phage	96.8	2.3e-85
VEJ12458.1|609747_611340_+|terminase	Phage terminase large subunit	terminase	A0A1B0RXJ8	Streptococcus_phage	95.5	2.5e-306
VEJ12459.1|611410_611668_+	cytoplasmic protein	NA	E4ZFM1	Streptococcus_phage	95.3	1.2e-35
VEJ12460.1|611664_612036_+	Death on curing protein, Doc toxin	NA	A0A1X9I6C0	Streptococcus_phage	89.4	1.2e-57
VEJ12461.1|612061_612388_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12462.1|612455_613532_+|portal	prophage LambdaSa04, HK97 family portal protein	portal	D0R0D3	Streptococcus_phage	92.0	3.0e-186
VEJ12463.1|613528_613744_+|portal	prophage LambdaSa04, HK97 family portal protein	portal	E4ZFM3	Streptococcus_phage	81.7	2.9e-24
VEJ12464.1|613736_614435_+|protease	Prophage Clp protease-like protein	protease	A0A1B0RXE1	Streptococcus_phage	83.2	3.8e-105
VEJ12465.1|614448_615657_+|capsid	Phage major capsid protein	capsid	M1Q1R5	Streptococcus_phage	90.8	4.0e-211
VEJ12466.1|615653_615911_+	uncharacterised phage protein	NA	D0R0D7	Streptococcus_phage	77.6	9.5e-30
VEJ12467.1|615910_616249_+|head,tail	Bacteriophage head-tail adaptor	head,tail	A0A1B0RXE4	Streptococcus_phage	68.8	4.7e-37
VEJ12468.1|616241_616610_+	prophage pi2 protein 37	NA	Q6DMT7	Streptococcus_phage	62.1	1.0e-32
VEJ12469.1|616618_616945_+	prophage pi2 protein 38	NA	M1Q1Z4	Streptococcus_phage	68.5	2.4e-38
VEJ12470.1|616947_617517_+	Prophage pi2 protein 39	NA	A0A1B0RXE2	Streptococcus_phage	95.2	3.6e-98
VEJ12471.1|617528_617948_+	prophage pi2 protein 40	NA	A0A1X9I691	Streptococcus_phage	76.3	9.7e-56
VEJ12472.1|618242_621362_+|tail	Phage tail length tape-measure protein	tail	Q6DMT2	Streptococcus_phage	77.1	5.8e-254
VEJ12473.1|621358_622084_+	Uncharacterised protein	NA	M1Q107	Streptococcus_phage	61.1	1.6e-82
VEJ12474.1|622083_624999_+	prophage minor structural protein	NA	Q6DMT0	Streptococcus_phage	64.1	0.0e+00
VEJ12475.1|625011_626868_+	Phage structural protein	NA	Q6DMS9	Streptococcus_phage	73.1	1.0e-258
VEJ12476.1|626885_627284_+|lysis	Holin, toxin secretion/phage lysis	lysis	D0R0E9	Streptococcus_phage	60.8	5.1e-38
VEJ12477.1|627285_628692_+	Phage-associated cell wall hydrolase	NA	A0A1B0RXL4	Streptococcus_phage	63.1	2.4e-106
VEJ12478.1|629242_630484_+	Recombinase	NA	A0A1X9I6J1	Streptococcus_phage	69.2	7.8e-170
VEJ12479.1|630446_631733_+	prophage LambdaSa04, site-specific recombinase resolvase	NA	E4ZFN9	Streptococcus_phage	79.8	1.2e-194
VEJ12480.1|631802_632576_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ12481.1|632589_634095_+	serine/threonine protein kinase	NA	A0A0G2YBE6	Acanthamoeba_polyphaga_mimivirus	25.1	3.8e-09
>prophage 4
LR134512	Streptococcus agalactiae strain NCTC13949 genome assembly, chromosome: 1	2032876	1505511	1516245	2032876		Streptococcus_phage(84.62%)	14	NA	NA
VEJ13293.1|1505511_1506339_+	Exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.4	5.1e-125
VEJ13294.1|1506379_1506736_-	Arsenate reductase	NA	M1PLC0	Streptococcus_phage	72.6	5.2e-42
VEJ13295.1|1506737_1507214_-	Methylated-DNA--protein-cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
VEJ13296.1|1507270_1508452_-	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.3	1.1e-168
VEJ13297.1|1508514_1509063_-	Acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
VEJ13298.1|1509130_1510222_-	Phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	78.0	1.7e-165
VEJ13299.1|1510354_1510990_+	Cytoplasmic copper homeostasis protein CutC	NA	NA	NA	NA	NA
VEJ13300.1|1511259_1512123_-	rRNA small subunit methyltransferase I	NA	M1PLC5	Streptococcus_phage	70.7	4.8e-110
VEJ13301.1|1512128_1512455_-	DNA replication intiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
VEJ13302.1|1512485_1513349_-	DNA polymerase III delta prime subunit	NA	M1NSC1	Streptococcus_phage	50.0	2.5e-74
VEJ13303.1|1513368_1514004_-	Thymidylate kinase	NA	M1PSC7	Streptococcus_phage	60.1	1.4e-66
VEJ13304.1|1514092_1514752_-	Acetoin utilization acuB protein	NA	M1NSC5	Streptococcus_phage	56.5	4.7e-65
VEJ13305.1|1514770_1515481_-	ABC transporter ATP-binding protein; Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	NA	G9BWD6	Planktothrix_phage	28.1	2.7e-18
VEJ13306.1|1515480_1516245_-	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-14
>prophage 5
LR134512	Streptococcus agalactiae strain NCTC13949 genome assembly, chromosome: 1	2032876	2002155	2009329	2032876	protease	Staphylococcus_phage(33.33%)	8	NA	NA
VEJ13791.1|2002155_2002803_-	immunodominant antigen A	NA	Q4Z8Z7	Staphylococcus_phage	54.3	6.5e-27
VEJ13792.1|2002935_2003475_-	Aggregation promoting factor	NA	A0A249XZV3	Enterococcus_phage	46.4	1.3e-17
VEJ13793.1|2003690_2004485_-	Transmembrane component of general energizing module of ECF transporters	NA	NA	NA	NA	NA
VEJ13794.1|2004477_2005320_-	ATPase component of general energizing module of ECF transporters	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
VEJ13795.1|2005295_2006135_-	ATPase component of general energizing module of ECF transporters	NA	G9BWD6	Planktothrix_phage	30.0	3.5e-20
VEJ13796.1|2006134_2006698_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
VEJ13797.1|2006799_2008083_-	FIG009210: peptidase, M16 family	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	1.6e-05
VEJ13798.1|2008084_2009329_-|protease	FIG001621: Zinc protease	protease	A0A1X9I714	Streptococcus_phage	41.3	3.7e-87
