assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900638315.1_57195_D02	LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	1	292365-296237	1,1,1,2,3,4,5	PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR,PILER-CR	no	cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2	DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,WYL,DinG,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,csa3	Type I-F	GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAACTATT,GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA	28,28,28,33,28,28,28	0	0	NA	NA	NA:NA:NA:NA:NA:NA:NA	57,64,64,57,57,57,57	64	TypeI-F	DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,WYL,DinG,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,csa3	NA,NA|197aa|down_3|LR134514.1_302743_303334_+	NA|164aa|up_9|LR134514.1_277537_278029_+	COG3721, HugX, Putative heme iron utilization protein [Inorganic ion transport and metabolism]	NA|172aa|up_8|LR134514.1_278044_278560_+	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ	NA|1093aa|up_7|LR134514.1_278601_281880_+	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|371aa|up_6|LR134514.1_282454_283567_-	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|683aa|up_5|LR134514.1_283748_285797_+	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|720aa|up_4|LR134514.1_285930_288090_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	cas8f|445aa|up_3|LR134514.1_288320_289655_+	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	cas5f|328aa|up_2|LR134514.1_289664_290648_+	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	cas7f|337aa|up_1|LR134514.1_290650_291661_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|187aa|up_0|LR134514.1_291663_292224_+	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	cas1|327aa|down_0|LR134514.1_296406_297387_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1107aa|down_1|LR134514.1_297367_300688_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	NA|619aa|down_2|LR134514.1_300745_302602_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|197aa|down_3|LR134514.1_302743_303334_+	NA	NA|268aa|down_4|LR134514.1_303397_304201_-	PRK10757, PRK10757, inositol-1-monophosphatase	NA|239aa|down_5|LR134514.1_304414_305131_+	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|155aa|down_6|LR134514.1_305209_305674_+	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|405aa|down_7|LR134514.1_305721_306936_+	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|129aa|down_8|LR134514.1_307180_307567_+	PRK11325, PRK11325, scaffold protein; Provisional	NA|108aa|down_9|LR134514.1_307636_307960_+	TIGR02011, Protein_yfhF
GCA_900638315.1_57195_D02	LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	2	758546-760068	6,2,2	PILER-CR,CRISPRCasFinder,CRT	no	DinG	DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,WYL,DinG,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,csa3	Type IV-A	GTCGAAAGACACTGCCCTGTTCTAAAGGGATTGAGAC,GTCGAAAGACACTGCCCTGTTCTAAAGGGATTGAGAC,GTCGAAAGACACTGCCCTGTTCTAAAGGGATTGAGAC	37,37,37	0	0	NA	NA	NA:NA:NA	19,21,20	21	Orphan	DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,WYL,DinG,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,csa3	NA|234aa|up_4|LR134514.1_752937_753639_+,NA	NA|435aa|up_9|LR134514.1_747441_748746_-	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|234aa|up_8|LR134514.1_748895_749597_-	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase	NA|239aa|up_7|LR134514.1_749619_750336_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|587aa|up_6|LR134514.1_750413_752174_+	TIGR03549, TIGR03549, YcaO domain protein	NA|138aa|up_5|LR134514.1_752294_752708_+	COG3105, COG3105, Uncharacterized protein conserved in bacteria [Function unknown]	NA|234aa|up_4|LR134514.1_752937_753639_+	NA	NA|258aa|up_3|LR134514.1_753709_754483_-	TIGR01619, Uncharacterized_protein_HI_0040, TIGR01619 family protein	NA|281aa|up_2|LR134514.1_754492_755335_-	PRK11756, PRK11756, exonuclease III; Provisional	NA|654aa|up_1|LR134514.1_755543_757505_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|219aa|up_0|LR134514.1_757599_758256_-	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|407aa|down_0|LR134514.1_760256_761477_+	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional	NA|241aa|down_1|LR134514.1_761478_762201_+	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional	NA|196aa|down_2|LR134514.1_762217_762805_-	PRK06029, PRK06029, UbiX family flavin prenyltransferase	NA|505aa|down_3|LR134514.1_762964_764479_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|164aa|down_4|LR134514.1_764492_764984_-	PRK10845, PRK10845, colicin V production protein; Provisional	NA|148aa|down_5|LR134514.1_765140_765584_-	COG3092, COG3092, Uncharacterized protein conserved in bacteria [Function unknown]	NA|402aa|down_6|LR134514.1_765870_767076_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|713aa|down_7|LR134514.1_767144_769283_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|384aa|down_8|LR134514.1_769356_770508_-	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|563aa|down_9|LR134514.1_770562_772251_-	PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase FadD
GCA_900638315.1_57195_D02	LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	3	844627-846762	3,3,7	CRISPRCasFinder,CRT,PILER-CR	no	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1	DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,WYL,DinG,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,csa3	Type III-D,Type III-C,Type III-A,Type III-B	GTCTAAAGACACCGCCCTGTTCTAAAGGGATTGAGAC,GTCTAAAGACACCGCCCTGNTCTAAAGGGATTGAGAC,GTCTAAAGACACCGCCCTGTTCTAAAGGGATTGAGAC	37,37,37	0	0	NA	NA	NA:NA:NA	30,30,27	30	TypeIII-D,TypeIII-C,TypeIII-A,TypeIII-B	DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,WYL,DinG,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,csa3	NA|136aa|up_0|LR134514.1_843972_844380_+,NA|257aa|down_9|LR134514.1_856653_857424_+	cas10|872aa|up_9|LR134514.1_834007_836623_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|135aa|up_8|LR134514.1_836634_837039_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|233aa|up_7|LR134514.1_837049_837748_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|312aa|up_6|LR134514.1_837757_838693_+	TIGR01903, Hypothetical_protein	csm5gr7|514aa|up_5|LR134514.1_838697_840239_+	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas6|306aa|up_4|LR134514.1_840242_841160_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	csx16|97aa|up_3|LR134514.1_841240_841531_+	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548)	csx1|392aa|up_2|LR134514.1_841541_842717_+	pfam09002, DUF1887, Domain of unknown function (DUF1887)	csx1|375aa|up_1|LR134514.1_842716_843841_+	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|136aa|up_0|LR134514.1_843972_844380_+	NA	cas2|94aa|down_0|LR134514.1_846870_847152_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|357aa|down_1|LR134514.1_847167_848238_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|100aa|down_2|LR134514.1_848246_848546_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|241aa|down_3|LR134514.1_848667_849390_+	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|73aa|down_4|LR134514.1_849798_850017_-	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|396aa|down_5|LR134514.1_850216_851404_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|1126aa|down_6|LR134514.1_851545_854923_-	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|305aa|down_7|LR134514.1_855126_856041_-	PRK05033, truB, tRNA pseudouridine synthase B; Provisional	NA|133aa|down_8|LR134514.1_856040_856439_-	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|257aa|down_9|LR134514.1_856653_857424_+	NA
GCA_900638315.1_57195_D02	LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	4	1543527-1547037	8,4,4	PILER-CR,CRISPRCasFinder,CRT	no	cas3	DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,WYL,DinG,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,csa3	Unclear	TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	58,58,58	58	Unclear	DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,WYL,DinG,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,csa3	NA,NA	NA|529aa|up_9|LR134514.1_1531568_1533155_-	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|456aa|up_8|LR134514.1_1533517_1534885_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|204aa|up_7|LR134514.1_1534912_1535524_-	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|309aa|up_6|LR134514.1_1535710_1536637_+	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|481aa|up_5|LR134514.1_1536674_1538117_+	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|340aa|up_4|LR134514.1_1538142_1539162_+	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|475aa|up_3|LR134514.1_1539389_1540814_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|137aa|up_2|LR134514.1_1540930_1541341_+	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|349aa|up_1|LR134514.1_1541406_1542453_+	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|322aa|up_0|LR134514.1_1542449_1543415_+	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	cas3|446aa|down_0|LR134514.1_1547174_1548512_-	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|238aa|down_1|LR134514.1_1548623_1549337_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|235aa|down_2|LR134514.1_1549384_1550089_-	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|968aa|down_3|LR134514.1_1550366_1553270_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_4|LR134514.1_1553350_1554010_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|190aa|down_5|LR134514.1_1554073_1554643_+	pfam04220, YihI, Der GTPase activator (YihI)	NA|144aa|down_6|LR134514.1_1554645_1555077_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|456aa|down_7|LR134514.1_1555100_1556468_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|223aa|down_8|LR134514.1_1556508_1557177_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|373aa|down_9|LR134514.1_1557319_1558438_+	pfam03702, AnmK, Anhydro-N-acetylmuramic acid kinase
