The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	2317054	667917	773666	2317054	tRNA,tail,integrase,portal,head,protease,terminase,capsid	uncultured_Caudovirales_phage(27.27%)	96	671984:672004	714037:714057
VEJ14394.1|667917_670305_-|tRNA	phenylalanyl-tRNA synthase beta chain	tRNA	NA	NA	NA	NA
VEJ14395.1|670327_670807_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14396.1|670817_671801_-|tRNA	phenylalanyl-tRNA synthase alpha chain	tRNA	A0A2H4UW22	Bodo_saltans_virus	36.8	5.4e-33
VEJ14397.1|671939_672599_-	RNA pseudouridine synthase	NA	NA	NA	NA	NA
671984:672004	attL	CAAAAAATTGACCGCACTTTG	NA	NA	NA	NA
VEJ14398.1|672705_673356_+	protein GpmB	NA	A0A1X9IGJ2	Lactococcus_phage	30.3	9.9e-07
VEJ14399.1|673386_674715_-	folylpolyglutamate synthase	NA	NA	NA	NA	NA
VEJ14400.1|674707_675622_-	acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	NA	NA	NA	NA	NA
VEJ14401.1|675705_676500_-|tRNA	tRNA pseudouridine synthase A	tRNA	NA	NA	NA	NA
VEJ14402.1|676657_677500_+|protease	serine protease	protease	NA	NA	NA	NA
VEJ14403.1|677567_677852_-	50S ribosomal protein L25	NA	NA	NA	NA	NA
VEJ14404.1|678069_678684_+	DedA family membrane protein	NA	NA	NA	NA	NA
VEJ14405.1|678752_679487_-	dethiobiotin synthase-1	NA	NA	NA	NA	NA
VEJ14406.1|679652_680864_-	protein Mlc	NA	NA	NA	NA	NA
VEJ14407.1|681158_682562_+|tRNA	asparaginyl-tRNA synthetase	tRNA	A0A1V0SDB6	Indivirus	37.8	2.4e-82
VEJ14408.1|682622_684980_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
VEJ14409.1|685025_685871_-	ribosomal RNA small subunit methyltransferase I	NA	M1PLC5	Streptococcus_phage	43.2	4.4e-47
VEJ14410.1|685948_687661_+	LppC	NA	NA	NA	NA	NA
VEJ14411.1|687662_688022_+	endonuclease	NA	NA	NA	NA	NA
VEJ14412.1|688024_688612_+	phosphoheptose isomerase	NA	NA	NA	NA	NA
VEJ14413.1|688675_689260_+	putative transport-associated protein	NA	NA	NA	NA	NA
VEJ14414.1|689321_689936_-	riboflavin synthase subunit alpha	NA	NA	NA	NA	NA
VEJ14415.1|689991_691395_+	multidrug efflux protein, MATE family	NA	NA	NA	NA	NA
VEJ14416.1|691394_692447_+	oxidoreductase YdgJ	NA	NA	NA	NA	NA
VEJ14417.1|692576_694016_-	pyruvate kinase	NA	NA	NA	NA	NA
VEJ14418.1|694539_695751_+|integrase	phage integrase family site-specific recombinase	integrase	A0A1B5FPC6	Escherichia_phage	37.6	2.1e-71
VEJ14419.1|695925_697698_-	Superfamily II helicase and inactivated derivatives	NA	Q7M2A8	Enterobacteria_phage	35.6	1.9e-76
VEJ14420.1|697681_698107_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14421.1|698111_698432_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14422.1|698424_698640_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14423.1|698632_699277_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14424.1|699454_699766_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14425.1|699777_699981_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEJ14426.1|700166_701018_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14427.1|701171_701747_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14428.1|702088_702253_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14429.1|702236_703904_-|terminase	phage D3 terminase family protein	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	70.3	9.0e-246
VEJ14430.1|703903_704272_-|terminase	Phage terminase, small subunit	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	63.4	3.3e-36
VEJ14431.1|704452_704809_-	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	51.8	9.4e-28
VEJ14432.1|704817_705144_-	uncharacterized phage protein (possible DNA packaging)	NA	NA	NA	NA	NA
VEJ14433.1|705130_705487_-|head,tail	Bacteriophage head-tail adaptor	head,tail	A0A286S2A2	Klebsiella_phage	38.2	1.7e-08
VEJ14434.1|705470_706682_-|portal	phage portal protein, HK97 family	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	62.5	1.4e-144
VEJ14435.1|706683_707244_-|head,protease	phage prohead protease, HK97 family	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	61.2	2.2e-55
VEJ14436.1|707295_708495_-|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	62.4	1.0e-129
VEJ14437.1|708504_708912_-|tail	putative minor tail protein	tail	NA	NA	NA	NA
VEJ14438.1|709540_710752_+|integrase	phage integrase family site-specific recombinase	integrase	A0A1V0E8G8	Vibrio_phage	38.2	5.6e-80
VEJ14439.1|711980_712841_+	tellurite resistance protein TehB	NA	NA	NA	NA	NA
VEJ14440.1|712878_713961_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14441.1|714121_714946_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
714037:714057	attR	CAAAAAATTGACCGCACTTTG	NA	NA	NA	NA
VEJ14442.1|715128_720849_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
VEJ14443.1|720930_721902_-	HTH-type transcriptional regulator CysB	NA	NA	NA	NA	NA
VEJ14444.1|721942_722983_-	ribosomal large subunit pseudouridine synthase B	NA	NA	NA	NA	NA
VEJ14445.1|723031_723655_-	Sua5/YciO/YrdC/YwlC family protein	NA	NA	NA	NA	NA
VEJ14446.1|723964_726373_-	sialidase NanH	NA	G9B6J5	Skua_adenovirus	26.3	6.9e-13
VEJ14447.1|726713_727838_-	T-protein	NA	NA	NA	NA	NA
VEJ14448.1|727848_728901_-	phospho-2-dehydro-3-deoxyheptonate aldolase	NA	A0A067ZJG7	Escherichia_phage	51.7	5.7e-89
VEJ14449.1|729287_729773_+	ferritin FtnA	NA	NA	NA	NA	NA
VEJ14450.1|729788_730286_+	ferritin FtnB	NA	NA	NA	NA	NA
VEJ14451.1|730359_730461_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14452.1|730571_731330_+	anaerobic regulatory protein	NA	NA	NA	NA	NA
VEJ14453.1|731441_732380_+	universal stress protein E	NA	NA	NA	NA	NA
VEJ14454.1|732442_732817_-	cytochrome b562 family protein	NA	NA	NA	NA	NA
VEJ14455.1|732895_734779_-|protease	protease 4	protease	A0A2I6UGK8	Salinibacter_virus	29.0	7.0e-13
VEJ14456.1|734902_735457_+	nitroreductase-like protein	NA	NA	NA	NA	NA
VEJ14457.1|735549_735684_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14458.1|735685_736426_-	protein kinase-like domain protein	NA	NA	NA	NA	NA
VEJ14459.1|736502_737195_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ14460.1|737348_738263_-	N-acetyl-D-glucosamine kinase	NA	NA	NA	NA	NA
VEJ14461.1|738311_739061_-	phosphatidylglycerophosphatase B	NA	NA	NA	NA	NA
VEJ14462.1|739112_739772_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	43.3	1.2e-41
VEJ14463.1|739823_741395_-	putative oligopeptide transporter	NA	NA	NA	NA	NA
VEJ14464.1|741636_741813_-	putative transmembrane protein	NA	NA	NA	NA	NA
VEJ14465.1|741934_743974_+	oligopeptidase A	NA	NA	NA	NA	NA
VEJ14466.1|744035_745304_-	putative transmembrane protein	NA	NA	NA	NA	NA
VEJ14467.1|746140_747364_-	N-acetylglucosamine repressor	NA	NA	NA	NA	NA
VEJ14468.1|747441_748746_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
VEJ14469.1|748895_749597_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
VEJ14470.1|749619_750336_+	type 11 methyltransferase	NA	NA	NA	NA	NA
VEJ14471.1|750413_752174_+	YcaO-like family	NA	NA	NA	NA	NA
VEJ14472.1|752294_752708_+	putative transmembrane protein	NA	NA	NA	NA	NA
VEJ14473.1|752937_753639_+	putative transmembrane protein	NA	NA	NA	NA	NA
VEJ14474.1|753709_754483_-	putative transmembrane protein	NA	NA	NA	NA	NA
VEJ14475.1|754492_755335_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
VEJ14476.1|755543_757505_+	acetyl-coenzyme A synthase	NA	A0A2H4PQU7	Staphylococcus_phage	40.6	7.2e-93
VEJ14477.1|757599_758256_-	GTP cyclohydrolase I	NA	I6XC45	Vibriophage	50.2	2.0e-52
VEJ14478.1|760256_761477_+	molybdopterin molybdenumtransferase	NA	NA	NA	NA	NA
VEJ14479.1|761478_762201_+	molybdopterin synthase sulfurylase MoeB	NA	NA	NA	NA	NA
VEJ14480.1|762217_762805_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA	NA
VEJ14481.1|762964_764479_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	39.6	8.5e-86
VEJ14482.1|764492_764984_-	colicin V production protein	NA	NA	NA	NA	NA
VEJ14483.1|765140_765584_-	membrane protein	NA	NA	NA	NA	NA
VEJ14484.1|765870_767076_+	acetate kinase	NA	NA	NA	NA	NA
VEJ14485.1|767144_769283_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
VEJ14486.1|769356_770508_-	ribonuclease D	NA	NA	NA	NA	NA
VEJ14487.1|770562_772251_-	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.1	2.5e-30
VEJ14488.1|772371_772911_-	outer membrane lipoprotein Slp family protein	NA	NA	NA	NA	NA
VEJ14489.1|772946_773666_-|protease	peptidase M22, glycoprotease	protease	NA	NA	NA	NA
>prophage 2
LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	2317054	1093067	1102386	2317054	protease	Planktothrix_phage(33.33%)	9	NA	NA
VEJ14754.1|1093067_1094303_+	multifunctional CCA protein	NA	A0A0F6YPT7	Sinorhizobium_phage	48.5	2.6e-88
VEJ14755.1|1094343_1094961_+	outer-membrane lipoprotein LolB	NA	NA	NA	NA	NA
VEJ14756.1|1094960_1095848_+	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
VEJ14757.1|1095917_1096865_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	38.7	1.9e-43
VEJ14758.1|1096939_1098535_-|protease	metalloprotease	protease	A0A2K9VGT1	Pontimonas_phage	49.6	8.6e-20
VEJ14759.1|1098727_1099519_+	zinc import ATP-binding protein ZnuC	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.7	4.4e-17
VEJ14760.1|1099527_1100313_+	high-affinity zinc uptake system membrane protein ZnuB	NA	NA	NA	NA	NA
VEJ14761.1|1100390_1101371_-	dipeptide transport ATP-binding protein DppF	NA	G9BWD6	Planktothrix_phage	31.6	3.4e-19
VEJ14762.1|1101387_1102386_-	dipeptide transport ATP-binding protein DppD	NA	G9BWD6	Planktothrix_phage	29.4	3.0e-15
>prophage 3
LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	2317054	1500793	1508933	2317054		Staphylococcus_phage(33.33%)	8	NA	NA
VEJ15142.1|1500793_1502419_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	7.1e-155
VEJ15143.1|1502506_1503028_+	Type I restriction modification DNA specificity domain	NA	NA	NA	NA	NA
VEJ15144.1|1503019_1503946_-	Integrase	NA	A8ATM2	Listeria_phage	47.7	6.8e-78
VEJ15145.1|1503972_1504449_-	Type I restriction modification DNA specificity domain	NA	NA	NA	NA	NA
VEJ15146.1|1504567_1506184_-	putative type I restriction-modification system methyltransferase subunit	NA	A0A2H4PQP4	Staphylococcus_phage	49.1	3.4e-125
VEJ15147.1|1506247_1507462_-	Type I restriction modification DNA specificity domain	NA	A0A2H4PQP5	Staphylococcus_phage	23.2	1.8e-14
VEJ15148.1|1507723_1508242_-	Uncharacterised protein	NA	Q71TB7	Escherichia_phage	36.5	5.6e-21
VEJ15149.1|1508234_1508933_-	Protein of uncharacterised function (DUF3800)	NA	Q71TB8	Escherichia_phage	52.0	4.0e-62
>prophage 4
LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	2317054	1617195	1625256	2317054		Escherichia_phage(66.67%)	7	NA	NA
VEJ15237.1|1617195_1619070_+	selenocysteine-specific elongation factor	NA	A0A2K9KZ60	Tupanvirus	25.9	1.4e-13
VEJ15238.1|1619527_1619668_-	ferredoxin-type NapF family protein	NA	NA	NA	NA	NA
VEJ15239.1|1619685_1620291_-	DMSO/Nitrate reductase chaperone family protein	NA	A0A077SLS7	Escherichia_phage	37.2	5.4e-23
VEJ15240.1|1620379_1621228_-	anaerobic dimethyl sulfoxide reductase chain C	NA	A0A077SK59	Escherichia_phage	33.8	2.0e-20
VEJ15241.1|1621229_1621850_-	anaerobic dimethyl sulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	58.8	1.4e-71
VEJ15242.1|1621860_1624296_-	protein DmsA	NA	A0A077SK27	Escherichia_phage	50.2	9.8e-225
VEJ15243.1|1624542_1625256_-	MgtC/SapB transporter family protein	NA	G3MA03	Bacillus_virus	35.5	2.6e-16
>prophage 5
LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	2317054	2098408	2107070	2317054		Mannheimia_phage(40.0%)	15	NA	NA
VEJ15700.1|2098408_2099497_-	xylulose-5-phosphate/fructose-6-phosphate phosphoketolase	NA	G8C7S0	Escherichia_phage	38.4	1.5e-63
VEJ15701.1|2099741_2100038_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ15702.1|2100042_2100492_-	pyruvate kinase	NA	A0A0M3LQA6	Mannheimia_phage	48.0	1.6e-27
VEJ15703.1|2100498_2100765_-	Uncharacterised protein	NA	A0A0S2MWM9	Cellulophaga_phage	57.6	8.6e-18
VEJ15704.1|2100810_2101110_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ15705.1|2101119_2101944_-	Protein of uncharacterised function (DUF551)	NA	K7PHA5	Enterobacterial_phage	38.6	3.2e-10
VEJ15706.1|2101946_2102390_-	Uncharacterised protein	NA	A0A2K9V3W6	Faecalibacterium_phage	37.5	9.3e-25
VEJ15707.1|2102488_2102833_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ15708.1|2102930_2103317_-	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA	NA
VEJ15709.1|2103361_2103637_-	positive control sigma-like factor	NA	NA	NA	NA	NA
VEJ15710.1|2103717_2104173_-	single-stranded DNA-binding protein	NA	F8TUL2	EBPR_podovirus	53.6	1.7e-37
VEJ15711.1|2104172_2104712_-	Uncharacterised protein	NA	A0A2H4IZP3	uncultured_Caudovirales_phage	54.3	1.4e-06
VEJ15712.1|2104715_2105327_-	putative phage-type endonuclease	NA	A0A0M3LPU0	Mannheimia_phage	76.4	1.5e-86
VEJ15713.1|2105323_2106106_-	phage recombination protein Bet	NA	A0A0M3LR26	Mannheimia_phage	62.9	2.3e-90
VEJ15714.1|2106116_2107070_-	Uncharacterised protein	NA	A0A0M3LR66	Mannheimia_phage	39.3	1.9e-46
>prophage 6
LR134514	Pasteurella multocida subsp. septica strain NCTC11619 genome assembly, chromosome: 1	2317054	2110429	2124820	2317054	terminase,holin	Mannheimia_phage(20.0%)	21	NA	NA
VEJ15722.1|2110429_2111116_-	putative transcriptional regulator	NA	Q7Y5W5	Haemophilus_phage	58.0	6.0e-71
VEJ15723.1|2111243_2111453_+	helix-turn-helix domain-containing protein	NA	A0A077K9X2	Edwardsiella_phage	52.3	5.5e-12
VEJ15724.1|2111501_2111954_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ15725.1|2112011_2112695_+	putative DNA-binding protein (Roi)	NA	D0UIL6	Aggregatibacter_phage	67.9	1.2e-76
VEJ15726.1|2112691_2113483_+	HNH endonuclease	NA	A0A125RNK0	Pseudomonas_phage	49.4	1.0e-61
VEJ15727.1|2113472_2113973_+	Uncharacterised protein	NA	A0A0P0ZC04	Stx2-converting_phage	41.8	3.3e-10
VEJ15728.1|2114062_2114311_+	Uncharacterised protein	NA	W8EA44	Vibrio_phage	49.1	8.3e-07
VEJ15729.1|2114310_2115000_+	Replication protein P	NA	D0UIL4	Aggregatibacter_phage	35.6	2.2e-33
VEJ15730.1|2115003_2115540_+	phage N-6-adenine-methyltransferase	NA	A0A0M3LNW2	Mannheimia_phage	58.9	6.1e-55
VEJ15731.1|2115529_2115988_+	putative recombination protein NinB	NA	Q7Y5V7	Haemophilus_phage	55.5	5.3e-39
VEJ15732.1|2116579_2116864_+	82 prophage-derived uncharacterized protein ybcO	NA	A0A0M3LQ97	Mannheimia_phage	72.8	7.8e-33
VEJ15733.1|2116860_2117220_+	Crossover junction endodeoxyribonuclease rusA	NA	A0A0M3LPZ2	Mannheimia_phage	55.1	5.8e-33
VEJ15734.1|2117216_2117906_+	uncharacterized phage protein	NA	NA	NA	NA	NA
VEJ15735.1|2117902_2118304_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ15736.1|2118479_2118824_+|holin	phage holin, lambda family	holin	NA	NA	NA	NA
VEJ15737.1|2118816_2119230_+	Uncharacterised protein	NA	W0LI70	Edwardsiella_phage	61.2	1.1e-43
VEJ15738.1|2119475_2119757_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ15739.1|2119769_2120327_+	Protein of uncharacterised function (DUF2829)	NA	A0MZD7	Enterobacteria_phage	41.2	1.7e-15
VEJ15740.1|2120331_2121087_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ15741.1|2121086_2122634_+|terminase	phage terminase, large subunit, PBSX family	terminase	A0A1B1IRS4	uncultured_Mediterranean_phage	39.7	4.2e-96
VEJ15742.1|2122636_2124820_+	CCAAT-binding factor, subunit C	NA	S4S2T1	Puniceispirillum_phage	26.7	1.8e-44
